RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
PRPF18-201ENST00000320054 TULP4Q9NRJ4 1543 aa19■□□□□ 0.63
PRPF18-201ENST00000320054 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
PRPF18-201ENST00000320054 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
PRPF18-201ENST00000320054 CCDC7Q96M83 1385 aa18.98■□□□□ 0.63
PRPF18-201ENST00000320054 C11orf95C9JLR9 678 aaPredicted RBP18.98■□□□□ 0.63
PRPF18-201ENST00000320054 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
PRPF18-201ENST00000320054 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
PRPF18-201ENST00000320054 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
PRPF18-201ENST00000320054 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
PRPF18-201ENST00000320054 EVC2Q86UK5 1308 aa18.97■□□□□ 0.63
PRPF18-201ENST00000320054 PUS7Q96PZ0 661 aaKnown RBP18.96■□□□□ 0.63
PRPF18-201ENST00000320054 NCOA3Q9Y6Q9 1424 aa18.96■□□□□ 0.63
PRPF18-201ENST00000320054 MINK1Q8N4C8 1332 aaPredicted RBP18.96■□□□□ 0.63
PRPF18-201ENST00000320054 MYOM1P52179 1685 aa18.95■□□□□ 0.62
PRPF18-201ENST00000320054 CDC42BPGQ6DT37 1551 aa18.94■□□□□ 0.62
PRPF18-201ENST00000320054 FMN2Q9NZ56 1722 aa18.94■□□□□ 0.62
PRPF18-201ENST00000320054 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
PRPF18-201ENST00000320054 PROSER2Q86WR7 435 aaPredicted RBP18.93■□□□□ 0.62
PRPF18-201ENST00000320054 ZNF335Q9H4Z2 1342 aaPredicted RBP18.92■□□□□ 0.62
PRPF18-201ENST00000320054 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
PRPF18-201ENST00000320054 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
PRPF18-201ENST00000320054 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
PRPF18-201ENST00000320054 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
PRPF18-201ENST00000320054 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
PRPF18-201ENST00000320054 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
PRPF18-201ENST00000320054 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
PRPF18-201ENST00000320054 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
PRPF18-201ENST00000320054 USP32Q8NFA0 1604 aa18.88■□□□□ 0.61
PRPF18-201ENST00000320054 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
PRPF18-201ENST00000320054 DCCP43146 1447 aa18.86■□□□□ 0.61
PRPF18-201ENST00000320054 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
PRPF18-201ENST00000320054 ANKARQ7Z5J8 1434 aa18.85■□□□□ 0.61
PRPF18-201ENST00000320054 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
PRPF18-201ENST00000320054 CABP2Q9NPB3 220 aa18.85■□□□□ 0.61
PRPF18-201ENST00000320054 ATP7BP35670 1465 aa18.84■□□□□ 0.61
PRPF18-201ENST00000320054 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
PRPF18-201ENST00000320054 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
PRPF18-201ENST00000320054 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
PRPF18-201ENST00000320054 C19orf44Q9H6X5 657 aa18.83■□□□□ 0.6
PRPF18-201ENST00000320054 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
PRPF18-201ENST00000320054 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
PRPF18-201ENST00000320054 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
PRPF18-201ENST00000320054 MSH6P52701 1360 aa18.81■□□□□ 0.6
PRPF18-201ENST00000320054 PRR36Q9H6K5 1346 aa18.79■□□□□ 0.6
PRPF18-201ENST00000320054 PPIP5K1Q6PFW1 1433 aa18.78■□□□□ 0.6
PRPF18-201ENST00000320054 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
PRPF18-201ENST00000320054 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.6
PRPF18-201ENST00000320054 KIF1AQ12756 1690 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 ATF3P18847 181 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
PRPF18-201ENST00000320054 CD163L1Q9NR16 1453 aa18.75■□□□□ 0.59
PRPF18-201ENST00000320054 MST1RQ04912 1400 aa18.74■□□□□ 0.59
PRPF18-201ENST00000320054 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
PRPF18-201ENST00000320054 PANK3Q9H999 370 aa18.74■□□□□ 0.59
PRPF18-201ENST00000320054 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
PRPF18-201ENST00000320054 C1orf167Q5SNV9 1468 aa18.73■□□□□ 0.59
PRPF18-201ENST00000320054 DIEXFQ68CQ4 756 aaKnown RBP18.73■□□□□ 0.59
PRPF18-201ENST00000320054 TERF2IPQ9NYB0 399 aa18.73■□□□□ 0.59
PRPF18-201ENST00000320054 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
PRPF18-201ENST00000320054 NUTM2FA1L443 756 aa18.72■□□□□ 0.59
PRPF18-201ENST00000320054 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
PRPF18-201ENST00000320054 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
PRPF18-201ENST00000320054 A0A1W2PP64 1363 aa18.7■□□□□ 0.58
PRPF18-201ENST00000320054 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
PRPF18-201ENST00000320054 NRKQ7Z2Y5 1582 aa18.7■□□□□ 0.58
PRPF18-201ENST00000320054 HDGFL2Q7Z4V5 671 aaPredicted RBP18.7■□□□□ 0.58
PRPF18-201ENST00000320054 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
PRPF18-201ENST00000320054 ZNF692Q9BU19 519 aaPredicted RBP18.69■□□□□ 0.58
PRPF18-201ENST00000320054 CARD14Q9BXL6 1004 aa18.68■□□□□ 0.58
PRPF18-201ENST00000320054 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
PRPF18-201ENST00000320054 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
PRPF18-201ENST00000320054 ACEP12821 1306 aa18.67■□□□□ 0.58
PRPF18-201ENST00000320054 KTN1Q86UP2 1357 aaKnown RBP18.67■□□□□ 0.58
PRPF18-201ENST00000320054 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
PRPF18-201ENST00000320054 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
PRPF18-201ENST00000320054 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
PRPF18-201ENST00000320054 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
PRPF18-201ENST00000320054 KNSTRNQ9Y448 316 aa18.65■□□□□ 0.58
PRPF18-201ENST00000320054 NPC1L1Q9UHC9 1359 aa18.65■□□□□ 0.58
PRPF18-201ENST00000320054 USP6P35125 1406 aa18.65■□□□□ 0.58
PRPF18-201ENST00000320054 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PRPF18-201ENST00000320054 PMFBP1Q8TBY8 1022 aa18.64■□□□□ 0.57
PRPF18-201ENST00000320054 ORAI2Q96SN7 254 aa18.64■□□□□ 0.57
PRPF18-201ENST00000320054 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
PRPF18-201ENST00000320054 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
PRPF18-201ENST00000320054 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
PRPF18-201ENST00000320054 NHSL1Q5SYE7 1610 aa18.62■□□□□ 0.57
PRPF18-201ENST00000320054 NSD2O96028 1365 aa18.61■□□□□ 0.57
PRPF18-201ENST00000320054 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
PRPF18-201ENST00000320054 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
PRPF18-201ENST00000320054 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
PRPF18-201ENST00000320054 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
PRPF18-201ENST00000320054 BRINP3Q76B58 766 aa18.59■□□□□ 0.57
PRPF18-201ENST00000320054 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
PRPF18-201ENST00000320054 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
PRPF18-201ENST00000320054 ANP32CO43423 234 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms