RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 ROBO2Q9HCK4 1378 aa43.05■■■■■ 4.48
NECTIN3-201ENST00000319792 WAPLQ7Z5K2 1190 aa43.05■■■■■ 4.48
NECTIN3-201ENST00000319792 PANK3Q9H999 370 aa43.04■■■■■ 4.48
NECTIN3-201ENST00000319792 MINK1Q8N4C8 1332 aaPredicted RBP43.03■■■■■ 4.48
NECTIN3-201ENST00000319792 PER1O15534 1290 aaPredicted RBP43.03■■■■■ 4.48
NECTIN3-201ENST00000319792 CHD2O14647 1828 aaKnown RBP43.03■■■■■ 4.48
NECTIN3-201ENST00000319792 CCER2I3L3R5 266 aa43.02■■■■■ 4.48
NECTIN3-201ENST00000319792 PRKRIP1Q9H875 184 aaPredicted RBP43.02■■■■■ 4.48
NECTIN3-201ENST00000319792 ADGRB2O60241 1585 aa42.99■■■■■ 4.47
NECTIN3-201ENST00000319792 AMOTL2Q9Y2J4 779 aa42.97■■■■■ 4.47
NECTIN3-201ENST00000319792 SIPA1L2Q9P2F8 1722 aaPredicted RBP42.95■■■■■ 4.47
NECTIN3-201ENST00000319792 ATAD2Q6PL18 1390 aa42.93■■■■■ 4.46
NECTIN3-201ENST00000319792 NINLQ9Y2I6 1382 aa42.93■■■■■ 4.46
NECTIN3-201ENST00000319792 LMTK3Q96Q04 1460 aa42.92■■■■■ 4.46
NECTIN3-201ENST00000319792 KTN1Q86UP2 1357 aaKnown RBP42.92■■■■■ 4.46
NECTIN3-201ENST00000319792 CABP2Q9NPB3 220 aa42.91■■■■■ 4.46
NECTIN3-201ENST00000319792 NCKAP5LQ9HCH0 1330 aa42.9■■■■■ 4.46
NECTIN3-201ENST00000319792 CDK19Q9BWU1 502 aa42.88■■■■■ 4.46
NECTIN3-201ENST00000319792 SRPK2P78362 688 aaKnown RBP42.87■■■■■ 4.45
NECTIN3-201ENST00000319792 NWD1Q149M9 1564 aa42.84■■■■■ 4.45
NECTIN3-201ENST00000319792 WASLO00401 505 aaPredicted RBP42.82■■■■■ 4.45
NECTIN3-201ENST00000319792 SLC12A5Q9H2X9 1139 aa42.81■■■■■ 4.44
NECTIN3-201ENST00000319792 NPC1L1Q9UHC9 1359 aa42.81■■■■■ 4.44
NECTIN3-201ENST00000319792 PARD3Q8TEW0 1356 aa42.8■■■■■ 4.44
NECTIN3-201ENST00000319792 TMC1Q8TDI8 760 aa42.8■■■■■ 4.44
NECTIN3-201ENST00000319792 KNSTRNQ9Y448 316 aa42.8■■■■■ 4.44
NECTIN3-201ENST00000319792 USP32Q8NFA0 1604 aa42.8■■■■■ 4.44
NECTIN3-201ENST00000319792 KCNA6P17658 529 aa42.79■■■■■ 4.44
NECTIN3-201ENST00000319792 RALBP1Q15311 655 aa42.79■■■■■ 4.44
NECTIN3-201ENST00000319792 ANKRD36BQ8N2N9 1353 aa42.79■■■■■ 4.44
NECTIN3-201ENST00000319792 AMER1Q5JTC6 1135 aaPredicted RBP42.75■■■■■ 4.43
NECTIN3-201ENST00000319792 CARD14Q9BXL6 1004 aa42.75■■■■■ 4.43
NECTIN3-201ENST00000319792 STRCQ7RTU9 1775 aa42.72■■■■■ 4.43
NECTIN3-201ENST00000319792 HSPA2P54652 639 aa42.71■■■■■ 4.43
NECTIN3-201ENST00000319792 CD163L1Q9NR16 1453 aa42.7■■■■■ 4.43
NECTIN3-201ENST00000319792 TOPAZ1Q8N9V7 1692 aa42.69■■■■■ 4.42
NECTIN3-201ENST00000319792 ATP7BP35670 1465 aa42.69■■■■■ 4.42
NECTIN3-201ENST00000319792 NSD3Q9BZ95 1437 aa42.68■■■■■ 4.42
NECTIN3-201ENST00000319792 MYBBP1AQ9BQG0 1328 aaKnown RBP42.66■■■■■ 4.42
NECTIN3-201ENST00000319792 A0A1W2PP64 1363 aa42.65■■■■■ 4.42
NECTIN3-201ENST00000319792 NALCNQ8IZF0 1738 aa42.65■■■■■ 4.42
NECTIN3-201ENST00000319792 CNGB1Q14028 1251 aaPredicted RBP42.64■■■■■ 4.42
NECTIN3-201ENST00000319792 CC2D1BQ5T0F9 858 aaKnown RBP42.64■■■■■ 4.42
NECTIN3-201ENST00000319792 NKTRP30414 1462 aaKnown RBP42.62■■■■■ 4.41
NECTIN3-201ENST00000319792 NUDT16Q96DE0 195 aaKnown RBP42.61■■■■■ 4.41
NECTIN3-201ENST00000319792 TERF2IPQ9NYB0 399 aa42.61■■■■■ 4.41
NECTIN3-201ENST00000319792 CDC42BPGQ6DT37 1551 aa42.61■■■■■ 4.41
NECTIN3-201ENST00000319792 PPIP5K1Q6PFW1 1433 aa42.6■■■■■ 4.41
NECTIN3-201ENST00000319792 FMN2Q9NZ56 1722 aa42.6■■■■■ 4.41
NECTIN3-201ENST00000319792 ITSN1Q15811 1721 aa42.59■■■■■ 4.41
NECTIN3-201ENST00000319792 CABP1Q9NZU7 370 aa42.59■■■■■ 4.41
NECTIN3-201ENST00000319792 PRR36Q9H6K5 1346 aa42.58■■■■■ 4.41
NECTIN3-201ENST00000319792 CCDC184Q52MB2 194 aa42.58■■■■■ 4.41
NECTIN3-201ENST00000319792 AKAP12Q02952 1782 aa42.57■■■■■ 4.41
NECTIN3-201ENST00000319792 CCDC61Q9Y6R9 512 aa42.57■■■■■ 4.41
NECTIN3-201ENST00000319792 BRD4O60885 1362 aaPredicted RBP42.55■■■■■ 4.4
NECTIN3-201ENST00000319792 STRCP1A6NGW2 1772 aa42.54■■■■■ 4.4
NECTIN3-201ENST00000319792 CPSF1Q10570 1443 aaKnown RBP42.54■■■■■ 4.4
NECTIN3-201ENST00000319792 ADGRL3Q9HAR2 1447 aa42.54■■■■■ 4.4
NECTIN3-201ENST00000319792 HDGFL2Q7Z4V5 671 aaPredicted RBP42.54■■■■■ 4.4
NECTIN3-201ENST00000319792 MRS2Q9HD23 443 aa42.54■■■■■ 4.4
NECTIN3-201ENST00000319792 MON2Q7Z3U7 1717 aa42.53■■■■■ 4.4
NECTIN3-201ENST00000319792 CGNL1Q0VF96 1302 aa42.52■■■■■ 4.4
NECTIN3-201ENST00000319792 NSD2O96028 1365 aa42.52■■■■■ 4.4
NECTIN3-201ENST00000319792 ANKARQ7Z5J8 1434 aa42.51■■■■■ 4.4
NECTIN3-201ENST00000319792 NLRP13Q86W25 1043 aa42.5■■■■■ 4.39
NECTIN3-201ENST00000319792 ANKRD26Q9UPS8 1709 aa42.49■■■■■ 4.39
NECTIN3-201ENST00000319792 RGPD8O14715 1765 aaPredicted RBP42.49■■■■■ 4.39
NECTIN3-201ENST00000319792 YTHDC1Q96MU7 727 aaKnown RBP42.49■■■■■ 4.39
NECTIN3-201ENST00000319792 KIF20BQ96Q89 1820 aa42.48■■■■■ 4.39
NECTIN3-201ENST00000319792 PLEKHG3A1L390 1219 aa42.43■■■■■ 4.38
NECTIN3-201ENST00000319792 EDC4Q6P2E9 1401 aaKnown RBP42.4■■■■■ 4.38
NECTIN3-201ENST00000319792 PPP2R1AP30153 589 aa42.38■■■■■ 4.37
NECTIN3-201ENST00000319792 NRKQ7Z2Y5 1582 aa42.38■■■■■ 4.37
NECTIN3-201ENST00000319792 PROSER2Q86WR7 435 aaPredicted RBP42.36■■■■■ 4.37
NECTIN3-201ENST00000319792 NCOA3Q9Y6Q9 1424 aa42.36■■■■■ 4.37
NECTIN3-201ENST00000319792 ZNF692Q9BU19 519 aaPredicted RBP42.35■■■■■ 4.37
NECTIN3-201ENST00000319792 NUTM2FA1L443 756 aa42.33■■■■■ 4.37
NECTIN3-201ENST00000319792 RBM33Q96EV2 1170 aaKnown RBP42.32■■■■■ 4.37
NECTIN3-201ENST00000319792 POLR3AO14802 1390 aaPredicted RBP42.31■■■■■ 4.36
NECTIN3-201ENST00000319792 MORC1Q86VD1 984 aa42.31■■■■■ 4.36
NECTIN3-201ENST00000319792 ACEP12821 1306 aa42.29■■■■■ 4.36
NECTIN3-201ENST00000319792 FYB1O15117 783 aa42.29■■■■■ 4.36
NECTIN3-201ENST00000319792 PNISRQ8TF01 805 aaKnown RBP42.29■■■■■ 4.36
NECTIN3-201ENST00000319792 USP6P35125 1406 aa42.26■■■■■ 4.36
NECTIN3-201ENST00000319792 TMEM94Q12767 1356 aa42.25■■■■■ 4.35
NECTIN3-201ENST00000319792 XIRP1Q702N8 1843 aaKnown RBP42.25■■■■■ 4.35
NECTIN3-201ENST00000319792 C14orf37Q86TY3 774 aa42.25■■■■■ 4.35
NECTIN3-201ENST00000319792 DCCP43146 1447 aa42.23■■■■■ 4.35
NECTIN3-201ENST00000319792 FAM9BQ8IZU0 186 aa42.22■■■■■ 4.35
NECTIN3-201ENST00000319792 SSH2Q76I76 1423 aa42.21■■■■■ 4.35
NECTIN3-201ENST00000319792 CENPBP07199 599 aaPredicted RBP42.2■■■■■ 4.35
NECTIN3-201ENST00000319792 GGNBP2Q9H3C7 697 aa42.2■■■■■ 4.35
NECTIN3-201ENST00000319792 C19orf44Q9H6X5 657 aa42.2■■■■■ 4.35
NECTIN3-201ENST00000319792 DMRT2Q9Y5R5 561 aa42.2■■■■■ 4.35
NECTIN3-201ENST00000319792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP42.17■■■■■ 4.34
NECTIN3-201ENST00000319792 PMFBP1Q8TBY8 1022 aa42.15■■■■■ 4.34
NECTIN3-201ENST00000319792 TTC21BQ7Z4L5 1316 aa42.14■■■■■ 4.34
NECTIN3-201ENST00000319792 LRRC7Q96NW7 1537 aa42.14■■■■■ 4.34
NECTIN3-201ENST00000319792 NGDNQ8NEJ9 315 aaKnown RBP42.13■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms