RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
RPP40-201ENST00000319533 TECPR2O15040 1411 aa21.33■■□□□ 1.01
RPP40-201ENST00000319533 RGS12O14924 1447 aa21.31■■□□□ 1
RPP40-201ENST00000319533 COL22A1Q8NFW1 1626 aaPredicted RBP21.31■■□□□ 1
RPP40-201ENST00000319533 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
RPP40-201ENST00000319533 IFT172Q9UG01 1749 aa21.3■■□□□ 1
RPP40-201ENST00000319533 NGLY1Q96IV0 654 aa21.3■■□□□ 1
RPP40-201ENST00000319533 MPHOSPH9Q99550 1183 aa21.3■■□□□ 1
RPP40-201ENST00000319533 LRPPRCP42704 1394 aaKnown RBP21.29■■□□□ 1
RPP40-201ENST00000319533 ABCC11Q96J66 1382 aa21.29■■□□□ 1
RPP40-201ENST00000319533 ADAMTS2O95450 1211 aa21.29■■□□□ 1
RPP40-201ENST00000319533 FNBP4Q8N3X1 1017 aaPredicted RBP21.28■■□□□ 1
RPP40-201ENST00000319533 NPHP3Q7Z494 1330 aa21.28■■□□□ 1
RPP40-201ENST00000319533 PXDNQ92626 1479 aa21.27■■□□□ 1
RPP40-201ENST00000319533 MSH5O43196 834 aa21.27■■□□□ 1
RPP40-201ENST00000319533 MYOM2P54296 1465 aa21.26■□□□□ 0.99
RPP40-201ENST00000319533 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
RPP40-201ENST00000319533 ESCO1Q5FWF5 840 aa21.26■□□□□ 0.99
RPP40-201ENST00000319533 PIK3C2GO75747 1445 aa21.26■□□□□ 0.99
RPP40-201ENST00000319533 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
RPP40-201ENST00000319533 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
RPP40-201ENST00000319533 USP21Q9UK80 565 aa21.24■□□□□ 0.99
RPP40-201ENST00000319533 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
RPP40-201ENST00000319533 STK26Q9P289 416 aa21.23■□□□□ 0.99
RPP40-201ENST00000319533 TRPC5Q9UL62 973 aaPredicted RBP21.23■□□□□ 0.99
RPP40-201ENST00000319533 ATRNO75882 1429 aa21.22■□□□□ 0.99
RPP40-201ENST00000319533 SIRT1Q96EB6 747 aa21.22■□□□□ 0.99
RPP40-201ENST00000319533 FOXO3O43524 673 aa21.21■□□□□ 0.99
RPP40-201ENST00000319533 TMEM132EQ6IEE7 984 aa21.21■□□□□ 0.99
RPP40-201ENST00000319533 PLEKHH1Q9ULM0 1364 aa21.21■□□□□ 0.99
RPP40-201ENST00000319533 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
RPP40-201ENST00000319533 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
RPP40-201ENST00000319533 NRXN1Q9ULB1 1477 aa21.19■□□□□ 0.98
RPP40-201ENST00000319533 FMN2Q9NZ56 1722 aa21.18■□□□□ 0.98
RPP40-201ENST00000319533 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
RPP40-201ENST00000319533 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
RPP40-201ENST00000319533 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
RPP40-201ENST00000319533 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
RPP40-201ENST00000319533 KIF1AQ12756 1690 aa21.15■□□□□ 0.98
RPP40-201ENST00000319533 SPATA31A3Q5VYP0 1347 aa21.14■□□□□ 0.97
RPP40-201ENST00000319533 NUTM2FA1L443 756 aa21.14■□□□□ 0.97
RPP40-201ENST00000319533 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
RPP40-201ENST00000319533 CFAP70Q5T0N1 1121 aa21.11■□□□□ 0.97
RPP40-201ENST00000319533 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.1■□□□□ 0.97
RPP40-201ENST00000319533 SLIT2O94813 1529 aa21.09■□□□□ 0.97
RPP40-201ENST00000319533 KRT28Q7Z3Y7 464 aa21.09■□□□□ 0.97
RPP40-201ENST00000319533 GJD4Q96KN9 370 aaPredicted RBP21.09■□□□□ 0.97
RPP40-201ENST00000319533 DLC1Q96QB1 1528 aa21.08■□□□□ 0.96
RPP40-201ENST00000319533 PHF8Q9UPP1 1060 aa21.07■□□□□ 0.96
RPP40-201ENST00000319533 EP400Q96L91 3159 aa21.06■□□□□ 0.96
RPP40-201ENST00000319533 RGPD8O14715 1765 aaPredicted RBP21.06■□□□□ 0.96
RPP40-201ENST00000319533 UNC5CLQ8IV45 518 aa21.06■□□□□ 0.96
RPP40-201ENST00000319533 TNS3Q68CZ2 1445 aa21.05■□□□□ 0.96
RPP40-201ENST00000319533 USP32Q8NFA0 1604 aa21.05■□□□□ 0.96
RPP40-201ENST00000319533 PRAM1Q96QH2 718 aa21.05■□□□□ 0.96
RPP40-201ENST00000319533 SBNO1A3KN83 1393 aa21.05■□□□□ 0.96
RPP40-201ENST00000319533 PSME1Q06323 249 aa21.04■□□□□ 0.96
RPP40-201ENST00000319533 CCDC125Q86Z20 511 aa21.04■□□□□ 0.96
RPP40-201ENST00000319533 RAB3GAP2Q9H2M9 1393 aa21.04■□□□□ 0.96
RPP40-201ENST00000319533 ANKARQ7Z5J8 1434 aa21.04■□□□□ 0.96
RPP40-201ENST00000319533 ADGRB1O14514 1584 aa21.03■□□□□ 0.96
RPP40-201ENST00000319533 GLI3P10071 1580 aa21.03■□□□□ 0.96
RPP40-201ENST00000319533 RALGAPBQ86X10 1494 aa21.03■□□□□ 0.96
RPP40-201ENST00000319533 ADGRB2O60241 1585 aa21.02■□□□□ 0.96
RPP40-201ENST00000319533 ARHGEF10O15013 1369 aa20.99■□□□□ 0.95
RPP40-201ENST00000319533 SRCAPQ6ZRS2 3230 aa20.99■□□□□ 0.95
RPP40-201ENST00000319533 SAFB2Q14151 953 aaKnown RBP eCLIP20.98■□□□□ 0.95
RPP40-201ENST00000319533 VPS72Q15906 364 aa20.98■□□□□ 0.95
RPP40-201ENST00000319533 POGKQ9P215 609 aa20.98■□□□□ 0.95
RPP40-201ENST00000319533 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
RPP40-201ENST00000319533 STAC3Q96MF2 364 aa20.97■□□□□ 0.95
RPP40-201ENST00000319533 ABCA3Q99758 1704 aa20.97■□□□□ 0.95
RPP40-201ENST00000319533 NWD2Q9ULI1 1742 aa20.97■□□□□ 0.95
RPP40-201ENST00000319533 ONECUT3O60422 494 aaPredicted RBP20.96■□□□□ 0.95
RPP40-201ENST00000319533 PLCH1Q4KWH8 1693 aa20.94■□□□□ 0.94
RPP40-201ENST00000319533 HRCP23327 699 aa20.94■□□□□ 0.94
RPP40-201ENST00000319533 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
RPP40-201ENST00000319533 PMFBP1Q8TBY8 1022 aa20.94■□□□□ 0.94
RPP40-201ENST00000319533 ZRANB1Q9UGI0 708 aa20.94■□□□□ 0.94
RPP40-201ENST00000319533 TRPM3Q9HCF6 1732 aaPredicted RBP20.94■□□□□ 0.94
RPP40-201ENST00000319533 EIF3AQ14152 1382 aaKnown RBP20.94■□□□□ 0.94
RPP40-201ENST00000319533 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
RPP40-201ENST00000319533 BLMP54132 1417 aaPredicted RBP20.93■□□□□ 0.94
RPP40-201ENST00000319533 BRWD3Q6RI45 1802 aa20.92■□□□□ 0.94
RPP40-201ENST00000319533 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
RPP40-201ENST00000319533 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
RPP40-201ENST00000319533 TULP4Q9NRJ4 1543 aa20.92■□□□□ 0.94
RPP40-201ENST00000319533 FAM83GA6ND36 823 aa20.91■□□□□ 0.94
RPP40-201ENST00000319533 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
RPP40-201ENST00000319533 ALS2Q96Q42 1657 aa20.91■□□□□ 0.94
RPP40-201ENST00000319533 WASLO00401 505 aaPredicted RBP20.9■□□□□ 0.94
RPP40-201ENST00000319533 LMOD2Q6P5Q4 547 aa20.9■□□□□ 0.94
RPP40-201ENST00000319533 MINK1Q8N4C8 1332 aaPredicted RBP20.89■□□□□ 0.93
RPP40-201ENST00000319533 HIRIP3Q9BW71 556 aaPredicted RBP20.89■□□□□ 0.93
RPP40-201ENST00000319533 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
RPP40-201ENST00000319533 GPRASP1Q5JY77 1395 aa20.88■□□□□ 0.93
RPP40-201ENST00000319533 NRAPQ86VF7 1730 aa20.87■□□□□ 0.93
RPP40-201ENST00000319533 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
RPP40-201ENST00000319533 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
RPP40-201ENST00000319533 CCDC9Q9Y3X0 531 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms