RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 MYL6BP14649 208 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 C19orf44Q9H6X5 657 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.24
NBPF3-201ENST00000318220 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
NBPF3-201ENST00000318220 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
NBPF3-201ENST00000318220 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
NBPF3-201ENST00000318220 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
NBPF3-201ENST00000318220 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
NBPF3-201ENST00000318220 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
NBPF3-201ENST00000318220 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
NBPF3-201ENST00000318220 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
NBPF3-201ENST00000318220 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
NBPF3-201ENST00000318220 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
NBPF3-201ENST00000318220 GPATCH3Q96I76 525 aa16.56■□□□□ 0.24
NBPF3-201ENST00000318220 NPHP3Q7Z494 1330 aa16.56■□□□□ 0.24
NBPF3-201ENST00000318220 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
NBPF3-201ENST00000318220 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
NBPF3-201ENST00000318220 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
NBPF3-201ENST00000318220 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
NBPF3-201ENST00000318220 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
NBPF3-201ENST00000318220 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
NBPF3-201ENST00000318220 PLCH2O75038 1416 aa16.54■□□□□ 0.24
NBPF3-201ENST00000318220 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
NBPF3-201ENST00000318220 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
NBPF3-201ENST00000318220 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
NBPF3-201ENST00000318220 TRAPPC8Q9Y2L5 1435 aa16.53■□□□□ 0.24
NBPF3-201ENST00000318220 PHF14O94880 888 aa16.52■□□□□ 0.24
NBPF3-201ENST00000318220 APPP05067 770 aa16.52■□□□□ 0.24
NBPF3-201ENST00000318220 CAMSAP2Q08AD1 1489 aa16.52■□□□□ 0.24
NBPF3-201ENST00000318220 FBLN1P23142 703 aa16.52■□□□□ 0.24
NBPF3-201ENST00000318220 GNAI1P63096 354 aa16.52■□□□□ 0.23
NBPF3-201ENST00000318220 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.23
NBPF3-201ENST00000318220 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
NBPF3-201ENST00000318220 FYB1O15117 783 aa16.51■□□□□ 0.23
NBPF3-201ENST00000318220 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
NBPF3-201ENST00000318220 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
NBPF3-201ENST00000318220 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
NBPF3-201ENST00000318220 ABCC5O15440 1437 aa16.5■□□□□ 0.23
NBPF3-201ENST00000318220 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
NBPF3-201ENST00000318220 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
NBPF3-201ENST00000318220 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
NBPF3-201ENST00000318220 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 KIF14Q15058 1648 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 LRPPRCP42704 1394 aaKnown RBP16.49■□□□□ 0.23
NBPF3-201ENST00000318220 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 CUL7Q14999 1698 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 A2MP01023 1474 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
NBPF3-201ENST00000318220 ZPR1O75312 459 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 BECN1Q14457 450 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 ACEP12821 1306 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 G3BP1Q13283 466 aaKnown RBP eCLIP16.48■□□□□ 0.23
NBPF3-201ENST00000318220 ANP32EQ9BTT0 268 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 COG6Q9Y2V7 657 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 MCCP23508 829 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
NBPF3-201ENST00000318220 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
NBPF3-201ENST00000318220 NOS1P29475 1434 aa16.47■□□□□ 0.23
NBPF3-201ENST00000318220 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
NBPF3-201ENST00000318220 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
NBPF3-201ENST00000318220 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
NBPF3-201ENST00000318220 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
NBPF3-201ENST00000318220 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
NBPF3-201ENST00000318220 SPRYD3Q8NCJ5 442 aa16.46■□□□□ 0.23
NBPF3-201ENST00000318220 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
NBPF3-201ENST00000318220 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
NBPF3-201ENST00000318220 ABCC2Q92887 1545 aa16.46■□□□□ 0.23
NBPF3-201ENST00000318220 DDB1Q16531 1140 aa16.46■□□□□ 0.22
NBPF3-201ENST00000318220 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.22
NBPF3-201ENST00000318220 MTMR7Q9Y216 660 aa16.46■□□□□ 0.22
NBPF3-201ENST00000318220 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
NBPF3-201ENST00000318220 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
NBPF3-201ENST00000318220 E9PSI1 815 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 STARD3NLO95772 234 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 AK7Q96M32 723 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 GPATCH8Q9UKJ3 1502 aaKnown RBP16.44■□□□□ 0.22
NBPF3-201ENST00000318220 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.22
NBPF3-201ENST00000318220 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
NBPF3-201ENST00000318220 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
NBPF3-201ENST00000318220 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
NBPF3-201ENST00000318220 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
NBPF3-201ENST00000318220 NBR1Q14596 966 aa16.43■□□□□ 0.22
NBPF3-201ENST00000318220 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
NBPF3-201ENST00000318220 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
NBPF3-201ENST00000318220 AMOTL1Q8IY63 956 aa16.42■□□□□ 0.22
NBPF3-201ENST00000318220 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
NBPF3-201ENST00000318220 CCAR1Q8IX12 1150 aaKnown RBP16.42■□□□□ 0.22
NBPF3-201ENST00000318220 TIAM1Q13009 1591 aa16.42■□□□□ 0.22
NBPF3-201ENST00000318220 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
NBPF3-201ENST00000318220 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
NBPF3-201ENST00000318220 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms