RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
ATG4C-201ENST00000317868 NSD2O96028 1365 aa18.16■□□□□ 0.5
ATG4C-201ENST00000317868 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
ATG4C-201ENST00000317868 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
ATG4C-201ENST00000317868 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
ATG4C-201ENST00000317868 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
ATG4C-201ENST00000317868 SLC52A1Q9NWF4 448 aa18.15■□□□□ 0.5
ATG4C-201ENST00000317868 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
ATG4C-201ENST00000317868 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.5
ATG4C-201ENST00000317868 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
ATG4C-201ENST00000317868 TSPOAP1O95153 1857 aa18.14■□□□□ 0.49
ATG4C-201ENST00000317868 MS4A1P11836 297 aa18.14■□□□□ 0.49
ATG4C-201ENST00000317868 IDI1Q13907 227 aa18.14■□□□□ 0.49
ATG4C-201ENST00000317868 C20orf194Q5TEA3 1177 aa18.14■□□□□ 0.49
ATG4C-201ENST00000317868 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
ATG4C-201ENST00000317868 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
ATG4C-201ENST00000317868 NINLQ9Y2I6 1382 aa18.13■□□□□ 0.49
ATG4C-201ENST00000317868 SPATA31D1Q6ZQQ2 1576 aa18.13■□□□□ 0.49
ATG4C-201ENST00000317868 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
ATG4C-201ENST00000317868 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
ATG4C-201ENST00000317868 APAF1O14727 1248 aa18.12■□□□□ 0.49
ATG4C-201ENST00000317868 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
ATG4C-201ENST00000317868 MED14O60244 1454 aa18.11■□□□□ 0.49
ATG4C-201ENST00000317868 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
ATG4C-201ENST00000317868 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
ATG4C-201ENST00000317868 E9PSI1 815 aa18.1■□□□□ 0.49
ATG4C-201ENST00000317868 NLRP1Q9C000 1473 aa18.09■□□□□ 0.49
ATG4C-201ENST00000317868 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
ATG4C-201ENST00000317868 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
ATG4C-201ENST00000317868 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
ATG4C-201ENST00000317868 CGNL1Q0VF96 1302 aa18.09■□□□□ 0.49
ATG4C-201ENST00000317868 DMRT2Q9Y5R5 561 aa18.08■□□□□ 0.49
ATG4C-201ENST00000317868 KIF13AQ9H1H9 1805 aa18.08■□□□□ 0.48
ATG4C-201ENST00000317868 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
ATG4C-201ENST00000317868 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
ATG4C-201ENST00000317868 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
ATG4C-201ENST00000317868 NRXN3Q9Y4C0 1643 aa18.07■□□□□ 0.48
ATG4C-201ENST00000317868 BACH2Q9BYV9 841 aa18.07■□□□□ 0.48
ATG4C-201ENST00000317868 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
ATG4C-201ENST00000317868 IPO9Q96P70 1041 aaKnown RBP18.05■□□□□ 0.48
ATG4C-201ENST00000317868 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
ATG4C-201ENST00000317868 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
ATG4C-201ENST00000317868 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
ATG4C-201ENST00000317868 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
ATG4C-201ENST00000317868 KNDC1Q76NI1 1749 aa18.05■□□□□ 0.48
ATG4C-201ENST00000317868 PDE4AP27815 886 aa18.04■□□□□ 0.48
ATG4C-201ENST00000317868 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
ATG4C-201ENST00000317868 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
ATG4C-201ENST00000317868 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
ATG4C-201ENST00000317868 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
ATG4C-201ENST00000317868 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
ATG4C-201ENST00000317868 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
ATG4C-201ENST00000317868 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
ATG4C-201ENST00000317868 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
ATG4C-201ENST00000317868 ATAD2Q6PL18 1390 aa18.02■□□□□ 0.48
ATG4C-201ENST00000317868 ERICH6Q7L0X2 663 aa18.02■□□□□ 0.47
ATG4C-201ENST00000317868 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
ATG4C-201ENST00000317868 MTHFSP49914 203 aa18■□□□□ 0.47
ATG4C-201ENST00000317868 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
ATG4C-201ENST00000317868 BCAR3O75815 825 aa17.98■□□□□ 0.47
ATG4C-201ENST00000317868 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
ATG4C-201ENST00000317868 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
ATG4C-201ENST00000317868 PDE3AQ14432 1141 aa17.96■□□□□ 0.47
ATG4C-201ENST00000317868 FBXO31Q5XUX0 539 aaPredicted RBP17.96■□□□□ 0.47
ATG4C-201ENST00000317868 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
ATG4C-201ENST00000317868 MON2Q7Z3U7 1717 aa17.96■□□□□ 0.47
ATG4C-201ENST00000317868 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
ATG4C-201ENST00000317868 ATP7BP35670 1465 aa17.95■□□□□ 0.46
ATG4C-201ENST00000317868 AKAP12Q02952 1782 aa17.95■□□□□ 0.46
ATG4C-201ENST00000317868 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
ATG4C-201ENST00000317868 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
ATG4C-201ENST00000317868 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
ATG4C-201ENST00000317868 SKAP1Q86WV1 359 aa17.94■□□□□ 0.46
ATG4C-201ENST00000317868 PNPLA6Q8IY17 1366 aa17.94■□□□□ 0.46
ATG4C-201ENST00000317868 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
ATG4C-201ENST00000317868 RIMS2Q9UQ26 1411 aa17.92■□□□□ 0.46
ATG4C-201ENST00000317868 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
ATG4C-201ENST00000317868 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
ATG4C-201ENST00000317868 CPS1P31327 1500 aa17.91■□□□□ 0.46
ATG4C-201ENST00000317868 RARSP54136 660 aaKnown RBP17.9■□□□□ 0.46
ATG4C-201ENST00000317868 STK26Q9P289 416 aa17.9■□□□□ 0.46
ATG4C-201ENST00000317868 FYB1O15117 783 aa17.9■□□□□ 0.46
ATG4C-201ENST00000317868 ITSN1Q15811 1721 aa17.89■□□□□ 0.46
ATG4C-201ENST00000317868 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.46
ATG4C-201ENST00000317868 SRPK2P78362 688 aaKnown RBP17.89■□□□□ 0.45
ATG4C-201ENST00000317868 C3P01024 1663 aa17.89■□□□□ 0.45
ATG4C-201ENST00000317868 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
ATG4C-201ENST00000317868 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
ATG4C-201ENST00000317868 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
ATG4C-201ENST00000317868 RRP7AQ9Y3A4 280 aaKnown RBP17.88■□□□□ 0.45
ATG4C-201ENST00000317868 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
ATG4C-201ENST00000317868 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
ATG4C-201ENST00000317868 TECPR2O15040 1411 aa17.87■□□□□ 0.45
ATG4C-201ENST00000317868 AAMPQ13685 434 aa17.87■□□□□ 0.45
ATG4C-201ENST00000317868 TOPAZ1Q8N9V7 1692 aa17.86■□□□□ 0.45
ATG4C-201ENST00000317868 CPSF1Q10570 1443 aaKnown RBP17.86■□□□□ 0.45
ATG4C-201ENST00000317868 CDK19Q9BWU1 502 aa17.85■□□□□ 0.45
ATG4C-201ENST00000317868 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
ATG4C-201ENST00000317868 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
ATG4C-201ENST00000317868 DLG5Q8TDM6 1919 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms