RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
HNF4A-201ENST00000316099 APAF1O14727 1248 aa13.57□□□□□ -0.24
HNF4A-201ENST00000316099 TET3O43151 1660 aa13.57□□□□□ -0.24
HNF4A-201ENST00000316099 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
HNF4A-201ENST00000316099 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
HNF4A-201ENST00000316099 UGGT1Q9NYU2 1555 aa13.57□□□□□ -0.24
HNF4A-201ENST00000316099 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
HNF4A-201ENST00000316099 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
HNF4A-201ENST00000316099 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
HNF4A-201ENST00000316099 NPATQ14207 1427 aa13.55□□□□□ -0.24
HNF4A-201ENST00000316099 NSD3Q9BZ95 1437 aa13.55□□□□□ -0.24
HNF4A-201ENST00000316099 KIF1BO60333 1816 aa13.55□□□□□ -0.24
HNF4A-201ENST00000316099 CEBPAP49715 358 aaPredicted RBP13.55□□□□□ -0.24
HNF4A-201ENST00000316099 MCCP23508 829 aa13.55□□□□□ -0.24
HNF4A-201ENST00000316099 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
HNF4A-201ENST00000316099 SPHKAPQ2M3C7 1700 aa13.54□□□□□ -0.24
HNF4A-201ENST00000316099 COG3Q96JB2 828 aa13.54□□□□□ -0.24
HNF4A-201ENST00000316099 MTHFSP49914 203 aa13.54□□□□□ -0.24
HNF4A-201ENST00000316099 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
HNF4A-201ENST00000316099 COL17A1Q9UMD9 1497 aaPredicted RBP13.53□□□□□ -0.24
HNF4A-201ENST00000316099 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 E9PCH4 1651 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
HNF4A-201ENST00000316099 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.25
HNF4A-201ENST00000316099 CLTCL1P53675 1640 aa13.52□□□□□ -0.25
HNF4A-201ENST00000316099 CDCA7LQ96GN5 454 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 PTPRTO14522 1441 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 PLIN1O60240 522 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 RWDD1Q9H446 243 aaPredicted RBP13.51□□□□□ -0.25
HNF4A-201ENST00000316099 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
HNF4A-201ENST00000316099 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
HNF4A-201ENST00000316099 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
HNF4A-201ENST00000316099 GOLGA6L4A6NEF3 574 aa13.51□□□□□ -0.25
HNF4A-201ENST00000316099 THEMISQ8N1K5 641 aaPredicted RBP13.51□□□□□ -0.25
HNF4A-201ENST00000316099 CEP152O94986 1710 aa13.5□□□□□ -0.25
HNF4A-201ENST00000316099 PMFBP1Q8TBY8 1022 aa13.5□□□□□ -0.25
HNF4A-201ENST00000316099 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
HNF4A-201ENST00000316099 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
HNF4A-201ENST00000316099 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
HNF4A-201ENST00000316099 ATAD2Q6PL18 1390 aa13.49□□□□□ -0.25
HNF4A-201ENST00000316099 TNRQ92752 1358 aa13.49□□□□□ -0.25
HNF4A-201ENST00000316099 DIAPH1O60610 1272 aaKnown RBP13.49□□□□□ -0.25
HNF4A-201ENST00000316099 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
HNF4A-201ENST00000316099 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
HNF4A-201ENST00000316099 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
HNF4A-201ENST00000316099 E9PSI1 815 aa13.48□□□□□ -0.25
HNF4A-201ENST00000316099 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
HNF4A-201ENST00000316099 RIMS2Q9UQ26 1411 aa13.48□□□□□ -0.25
HNF4A-201ENST00000316099 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
HNF4A-201ENST00000316099 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
HNF4A-201ENST00000316099 DRC7Q8IY82 874 aa13.47□□□□□ -0.25
HNF4A-201ENST00000316099 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
HNF4A-201ENST00000316099 ABCC3O15438 1527 aa13.47□□□□□ -0.25
HNF4A-201ENST00000316099 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
HNF4A-201ENST00000316099 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
HNF4A-201ENST00000316099 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.25
HNF4A-201ENST00000316099 PARD3Q8TEW0 1356 aa13.46□□□□□ -0.25
HNF4A-201ENST00000316099 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.25
HNF4A-201ENST00000316099 GSE1Q14687 1217 aa13.46□□□□□ -0.25
HNF4A-201ENST00000316099 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.26
HNF4A-201ENST00000316099 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.26
HNF4A-201ENST00000316099 AMPHP49418 695 aa13.45□□□□□ -0.26
HNF4A-201ENST00000316099 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-201ENST00000316099 HSP90AA2PQ14568 343 aaPredicted RBP13.45□□□□□ -0.26
HNF4A-201ENST00000316099 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
HNF4A-201ENST00000316099 KCNJ4P48050 445 aa13.44□□□□□ -0.26
HNF4A-201ENST00000316099 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
HNF4A-201ENST00000316099 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
HNF4A-201ENST00000316099 FGD1P98174 961 aa13.43□□□□□ -0.26
HNF4A-201ENST00000316099 OS9Q13438 667 aaPredicted RBP13.43□□□□□ -0.26
HNF4A-201ENST00000316099 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
HNF4A-201ENST00000316099 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
HNF4A-201ENST00000316099 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
HNF4A-201ENST00000316099 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
HNF4A-201ENST00000316099 NPHP1O15259 732 aa13.42□□□□□ -0.26
HNF4A-201ENST00000316099 HMOX1P09601 288 aa13.42□□□□□ -0.26
HNF4A-201ENST00000316099 MYOM2P54296 1465 aa13.42□□□□□ -0.26
HNF4A-201ENST00000316099 KDM5AP29375 1690 aaKnown RBP13.42□□□□□ -0.26
HNF4A-201ENST00000316099 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
HNF4A-201ENST00000316099 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
HNF4A-201ENST00000316099 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
HNF4A-201ENST00000316099 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
HNF4A-201ENST00000316099 RIPK4P57078 832 aa13.41□□□□□ -0.26
HNF4A-201ENST00000316099 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
HNF4A-201ENST00000316099 BCL2L13Q9BXK5 485 aa13.41□□□□□ -0.26
HNF4A-201ENST00000316099 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
HNF4A-201ENST00000316099 PDE4AP27815 886 aa13.4□□□□□ -0.26
HNF4A-201ENST00000316099 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
HNF4A-201ENST00000316099 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
HNF4A-201ENST00000316099 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
HNF4A-201ENST00000316099 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
HNF4A-201ENST00000316099 ANKLE2Q86XL3 938 aa13.4□□□□□ -0.26
HNF4A-201ENST00000316099 MADDQ8WXG6 1647 aa13.4□□□□□ -0.27
HNF4A-201ENST00000316099 NUTM2GQ5VZR2 741 aa13.39□□□□□ -0.27
HNF4A-201ENST00000316099 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms