RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 SRCAPQ6ZRS2 3230 aa17.92■□□□□ 0.46
ABCD3-201ENST00000315713 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
ABCD3-201ENST00000315713 ORAI2Q96SN7 254 aa17.92■□□□□ 0.46
ABCD3-201ENST00000315713 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
ABCD3-201ENST00000315713 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
ABCD3-201ENST00000315713 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
ABCD3-201ENST00000315713 PXDNQ92626 1479 aa17.91■□□□□ 0.46
ABCD3-201ENST00000315713 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
ABCD3-201ENST00000315713 MYOM2P54296 1465 aa17.9■□□□□ 0.46
ABCD3-201ENST00000315713 NGLY1Q96IV0 654 aa17.9■□□□□ 0.46
ABCD3-201ENST00000315713 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
ABCD3-201ENST00000315713 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
ABCD3-201ENST00000315713 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
ABCD3-201ENST00000315713 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
ABCD3-201ENST00000315713 ATRNO75882 1429 aa17.88■□□□□ 0.45
ABCD3-201ENST00000315713 ABCA3Q99758 1704 aa17.87■□□□□ 0.45
ABCD3-201ENST00000315713 FOXD1Q16676 465 aa17.87■□□□□ 0.45
ABCD3-201ENST00000315713 TECPR2O15040 1411 aa17.85■□□□□ 0.45
ABCD3-201ENST00000315713 HRCP23327 699 aa17.85■□□□□ 0.45
ABCD3-201ENST00000315713 ATAD2Q6PL18 1390 aa17.85■□□□□ 0.45
ABCD3-201ENST00000315713 USP21Q9UK80 565 aa17.85■□□□□ 0.45
ABCD3-201ENST00000315713 USP32Q8NFA0 1604 aa17.83■□□□□ 0.45
ABCD3-201ENST00000315713 CCDC144AA2RUR9 1427 aa17.83■□□□□ 0.45
ABCD3-201ENST00000315713 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.45
ABCD3-201ENST00000315713 NPHP3Q7Z494 1330 aa17.83■□□□□ 0.44
ABCD3-201ENST00000315713 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
ABCD3-201ENST00000315713 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
ABCD3-201ENST00000315713 PLCH1Q4KWH8 1693 aa17.83■□□□□ 0.44
ABCD3-201ENST00000315713 XPCQ01831 940 aaPredicted RBP17.82■□□□□ 0.44
ABCD3-201ENST00000315713 TRPC5Q9UL62 973 aaPredicted RBP17.82■□□□□ 0.44
ABCD3-201ENST00000315713 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
ABCD3-201ENST00000315713 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
ABCD3-201ENST00000315713 FNBP4Q8N3X1 1017 aaPredicted RBP17.81■□□□□ 0.44
ABCD3-201ENST00000315713 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
ABCD3-201ENST00000315713 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
ABCD3-201ENST00000315713 GLI3P10071 1580 aa17.8■□□□□ 0.44
ABCD3-201ENST00000315713 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
ABCD3-201ENST00000315713 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
ABCD3-201ENST00000315713 STK26Q9P289 416 aa17.78■□□□□ 0.44
ABCD3-201ENST00000315713 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
ABCD3-201ENST00000315713 FOXO3O43524 673 aa17.77■□□□□ 0.44
ABCD3-201ENST00000315713 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
ABCD3-201ENST00000315713 ANKRD30BQ9BXX2 1392 aa17.77■□□□□ 0.43
ABCD3-201ENST00000315713 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
ABCD3-201ENST00000315713 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
ABCD3-201ENST00000315713 SLIT2O94813 1529 aa17.74■□□□□ 0.43
ABCD3-201ENST00000315713 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
ABCD3-201ENST00000315713 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
ABCD3-201ENST00000315713 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
ABCD3-201ENST00000315713 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
ABCD3-201ENST00000315713 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
ABCD3-201ENST00000315713 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
ABCD3-201ENST00000315713 TNS3Q68CZ2 1445 aa17.71■□□□□ 0.43
ABCD3-201ENST00000315713 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
ABCD3-201ENST00000315713 SPATA31A3Q5VYP0 1347 aa17.7■□□□□ 0.42
ABCD3-201ENST00000315713 GJD4Q96KN9 370 aaPredicted RBP17.69■□□□□ 0.42
ABCD3-201ENST00000315713 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
ABCD3-201ENST00000315713 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
ABCD3-201ENST00000315713 UNC5CLQ8IV45 518 aa17.66■□□□□ 0.42
ABCD3-201ENST00000315713 DLC1Q96QB1 1528 aa17.66■□□□□ 0.42
ABCD3-201ENST00000315713 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.42
ABCD3-201ENST00000315713 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
ABCD3-201ENST00000315713 ZRANB1Q9UGI0 708 aa17.64■□□□□ 0.41
ABCD3-201ENST00000315713 ADGRB1O14514 1584 aa17.63■□□□□ 0.41
ABCD3-201ENST00000315713 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
ABCD3-201ENST00000315713 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
ABCD3-201ENST00000315713 ITSN1Q15811 1721 aa17.63■□□□□ 0.41
ABCD3-201ENST00000315713 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
ABCD3-201ENST00000315713 COL14A1Q05707 1796 aaKnown RBP17.62■□□□□ 0.41
ABCD3-201ENST00000315713 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
ABCD3-201ENST00000315713 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
ABCD3-201ENST00000315713 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
ABCD3-201ENST00000315713 CFAP70Q5T0N1 1121 aa17.61■□□□□ 0.41
ABCD3-201ENST00000315713 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
ABCD3-201ENST00000315713 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
ABCD3-201ENST00000315713 SBNO1A3KN83 1393 aa17.61■□□□□ 0.41
ABCD3-201ENST00000315713 DHX57Q6P158 1386 aaKnown RBP17.61■□□□□ 0.41
ABCD3-201ENST00000315713 LRP5O75197 1615 aa17.61■□□□□ 0.41
ABCD3-201ENST00000315713 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
ABCD3-201ENST00000315713 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
ABCD3-201ENST00000315713 ARHGEF10O15013 1369 aa17.6■□□□□ 0.41
ABCD3-201ENST00000315713 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
ABCD3-201ENST00000315713 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
ABCD3-201ENST00000315713 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
ABCD3-201ENST00000315713 PCGF6Q9BYE7 350 aa17.58■□□□□ 0.4
ABCD3-201ENST00000315713 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 PSME1Q06323 249 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 VPS72Q15906 364 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 LMOD2Q6P5Q4 547 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 DEFB132Q7Z7B7 95 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
ABCD3-201ENST00000315713 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
ABCD3-201ENST00000315713 THSD7AQ9UPZ6 1657 aa17.56■□□□□ 0.4
ABCD3-201ENST00000315713 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
ABCD3-201ENST00000315713 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
ABCD3-201ENST00000315713 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
ABCD3-201ENST00000315713 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
ABCD3-201ENST00000315713 POGKQ9P215 609 aa17.53■□□□□ 0.4
ABCD3-201ENST00000315713 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
ABCD3-201ENST00000315713 HIRIP3Q9BW71 556 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms