RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
CTC1-201ENST00000315684 NUDT16Q96DE0 195 aaKnown RBP11.22□□□□□ -0.61
CTC1-201ENST00000315684 EPRSP07814 1512 aaKnown RBP11.22□□□□□ -0.61
CTC1-201ENST00000315684 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
CTC1-201ENST00000315684 FANCAO15360 1455 aa11.22□□□□□ -0.61
CTC1-201ENST00000315684 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
CTC1-201ENST00000315684 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
CTC1-201ENST00000315684 AMOTL1Q8IY63 956 aa11.21□□□□□ -0.61
CTC1-201ENST00000315684 PLEKHH2Q8IVE3 1493 aa11.21□□□□□ -0.61
CTC1-201ENST00000315684 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
CTC1-201ENST00000315684 DENND4BO75064 1496 aaPredicted RBP11.21□□□□□ -0.61
CTC1-201ENST00000315684 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.61
CTC1-201ENST00000315684 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
CTC1-201ENST00000315684 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
CTC1-201ENST00000315684 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
CTC1-201ENST00000315684 HSCBQ8IWL3 235 aa11.21□□□□□ -0.62
CTC1-201ENST00000315684 WWC1Q8IX03 1113 aa11.21□□□□□ -0.62
CTC1-201ENST00000315684 ASXL2Q76L83 1435 aa11.21□□□□□ -0.62
CTC1-201ENST00000315684 SPG7Q9UQ90 795 aa11.21□□□□□ -0.62
CTC1-201ENST00000315684 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 PRKAR2BP31323 418 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 IDI1Q13907 227 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 ACSBG1Q96GR2 724 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
CTC1-201ENST00000315684 TCEAL9Q9UHQ7 104 aa11.2□□□□□ -0.62
CTC1-201ENST00000315684 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
CTC1-201ENST00000315684 CCAR1Q8IX12 1150 aaKnown RBP11.19□□□□□ -0.62
CTC1-201ENST00000315684 KIF14Q15058 1648 aa11.19□□□□□ -0.62
CTC1-201ENST00000315684 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
CTC1-201ENST00000315684 GRM1Q13255 1194 aa11.19□□□□□ -0.62
CTC1-201ENST00000315684 CABLES1Q8TDN4 633 aa11.19□□□□□ -0.62
CTC1-201ENST00000315684 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
CTC1-201ENST00000315684 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTC1-201ENST00000315684 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
CTC1-201ENST00000315684 COG6Q9Y2V7 657 aa11.18□□□□□ -0.62
CTC1-201ENST00000315684 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
CTC1-201ENST00000315684 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
CTC1-201ENST00000315684 IKQ13123 557 aaPredicted RBP11.17□□□□□ -0.62
CTC1-201ENST00000315684 EIF5BO60841 1220 aaKnown RBP11.17□□□□□ -0.62
CTC1-201ENST00000315684 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
CTC1-201ENST00000315684 CNNM1Q9NRU3 951 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
CTC1-201ENST00000315684 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
CTC1-201ENST00000315684 FOSBP53539 338 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 ATP2B2Q01814 1243 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 DAPK1P53355 1430 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 RUNDC1Q96C34 613 aa11.16□□□□□ -0.62
CTC1-201ENST00000315684 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 PRM3Q9NNZ6 103 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 MSH6P52701 1360 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
CTC1-201ENST00000315684 BTBD11A6QL63 1104 aa11.15□□□□□ -0.62
CTC1-201ENST00000315684 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.63
CTC1-201ENST00000315684 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.63
CTC1-201ENST00000315684 ZPR1O75312 459 aa11.14□□□□□ -0.63
CTC1-201ENST00000315684 SIL1Q9H173 461 aa11.14□□□□□ -0.63
CTC1-201ENST00000315684 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
CTC1-201ENST00000315684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.13□□□□□ -0.63
CTC1-201ENST00000315684 ZKSCAN2Q63HK3 967 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.635e-8■■■■□ 24.2
CTC1-201ENST00000315684 CUL7Q14999 1698 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 NME9Q86XW9 330 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
CTC1-201ENST00000315684 TNRQ92752 1358 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 EXOC5O00471 708 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 WASHC2AQ641Q2 1341 aa11.13□□□□□ -0.63
CTC1-201ENST00000315684 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
CTC1-201ENST00000315684 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
CTC1-201ENST00000315684 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
CTC1-201ENST00000315684 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
CTC1-201ENST00000315684 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
CTC1-201ENST00000315684 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
CTC1-201ENST00000315684 GNAI1P63096 354 aa11.12□□□□□ -0.63
CTC1-201ENST00000315684 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
CTC1-201ENST00000315684 E9PSI1 815 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 IBSPP21815 317 aaPredicted RBP11.11□□□□□ -0.63
CTC1-201ENST00000315684 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
CTC1-201ENST00000315684 CNKSR2Q8WXI2 1034 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 NFXL1Q6ZNB6 911 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 CCDC61Q9Y6R9 512 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 FBLN1P23142 703 aa11.11□□□□□ -0.63
CTC1-201ENST00000315684 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
CTC1-201ENST00000315684 TRIM44Q96DX7 344 aaPredicted RBP11.11□□□□□ -0.63
CTC1-201ENST00000315684 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 DRC7Q8IY82 874 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 TTLL12Q14166 644 aaPredicted RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 CADPS2Q86UW7 1296 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 ZSCAN29Q8IWY8 852 aaPredicted RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 C1orf115Q9H7X2 142 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms