RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 PDZRN3Q9UPQ7 1066 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 RALGAPBQ86X10 1494 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 TSPYL4Q9UJ04 414 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 CARD14Q9BXL6 1004 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 KIF16BQ96L93 1317 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 NME9Q86XW9 330 aa7.74□□□□□ -1.17
PRKDC-201ENST00000314191 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 TWISTNBQ3B726 338 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 DUSP27Q5VZP5 1158 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 TAOK2Q9UL54 1235 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 ESCO1Q5FWF5 840 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 TRIM6-TRIM34B2RNG4 842 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 NOL8Q76FK4 1167 aaKnown RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 WDR63Q8IWG1 891 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 NOB1Q9ULX3 412 aaKnown RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 RBM33Q96EV2 1170 aaKnown RBP7.73□□□□□ -1.17
PRKDC-201ENST00000314191 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
PRKDC-201ENST00000314191 BACH2Q9BYV9 841 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 CCDC61Q9Y6R9 512 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 ATF7IPQ6VMQ6 1270 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 PROSER2Q86WR7 435 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-201ENST00000314191 TMPOP42166 694 aaKnown RBP7.72□□□□□ -1.17
PRKDC-201ENST00000314191 C1orf141Q5JVX7 400 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 CFAP44Q96MT7 982 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 FAM135AQ9P2D6 1515 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 WDR7Q9Y4E6 1490 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 FCHSD2O94868 740 aa7.72□□□□□ -1.17
PRKDC-201ENST00000314191 RARSP54136 660 aaKnown RBP7.71□□□□□ -1.17
PRKDC-201ENST00000314191 DCTN1Q14203 1278 aa7.71□□□□□ -1.17
PRKDC-201ENST00000314191 ABTB2Q8N961 1025 aa7.71□□□□□ -1.17
PRKDC-201ENST00000314191 TRIM44Q96DX7 344 aaPredicted RBP7.71□□□□□ -1.17
PRKDC-201ENST00000314191 MCCP23508 829 aa7.71□□□□□ -1.18
PRKDC-201ENST00000314191 CHMP4AQ9BY43 222 aa7.71□□□□□ -1.18
PRKDC-201ENST00000314191 ADGRL2O95490 1459 aa7.71□□□□□ -1.18
PRKDC-201ENST00000314191 KDM5BQ9UGL1 1544 aa7.71□□□□□ -1.18
PRKDC-201ENST00000314191 A2MP01023 1474 aa7.71□□□□□ -1.18
PRKDC-201ENST00000314191 RILPL2Q969X0 211 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 PARD3Q8TEW0 1356 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 TEX14Q8IWB6 1497 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 MBD5Q9P267 1494 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 SAMD9Q5K651 1589 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 UHRF1BP1Q6BDS2 1440 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-201ENST00000314191 MSH5O43196 834 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 NAP1L2Q9ULW6 460 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-201ENST00000314191 FGD1P98174 961 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
PRKDC-201ENST00000314191 FYB1O15117 783 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 NLRP2Q9NX02 1062 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 NFE2L2Q16236 605 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 TARBP1Q13395 1621 aaKnown RBP7.69□□□□□ -1.18
PRKDC-201ENST00000314191 ABCC2Q92887 1545 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 SHANK2Q9UPX8 1470 aa7.69□□□□□ -1.18
PRKDC-201ENST00000314191 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 CCDC9Q9Y3X0 531 aaKnown RBP7.68□□□□□ -1.18
PRKDC-201ENST00000314191 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 AAMPQ13685 434 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 MVPQ14764 893 aaKnown RBP7.68□□□□□ -1.18
PRKDC-201ENST00000314191 CFAP43Q8NDM7 1665 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 CEP170Q5SW79 1584 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 PLCB2Q00722 1185 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
PRKDC-201ENST00000314191 TNNQ9UQP3 1299 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 ABCC10Q5T3U5 1492 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 RAPGEF4Q8WZA2 1011 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 ZRANB1Q9UGI0 708 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 KIAA1211Q6ZU35 1233 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 NCKAP5LQ9HCH0 1330 aa7.68□□□□□ -1.18
PRKDC-201ENST00000314191 SPINK5Q9NQ38 1064 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-201ENST00000314191 MIS18AQ9NYP9 233 aa7.67□□□□□ -1.18
PRKDC-201ENST00000314191 MCM10Q7L590 875 aa7.67□□□□□ -1.18
PRKDC-201ENST00000314191 FOXD4L5Q5VV16 416 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-201ENST00000314191 FOXD4L4Q8WXT5 416 aaPredicted RBP7.67□□□□□ -1.18
PRKDC-201ENST00000314191 AIMP1Q12904 312 aaKnown RBP7.67□□□□□ -1.18
PRKDC-201ENST00000314191 HDAC5Q9UQL6 1122 aa7.67□□□□□ -1.18
PRKDC-201ENST00000314191 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
PRKDC-201ENST00000314191 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 ZNF518AQ6AHZ1 1483 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 GPRASP1Q5JY77 1395 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 IGHDP01880 384 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 C22orf23Q9BZE7 217 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 C9orf78Q9NZ63 289 aaPredicted RBP7.66□□□□□ -1.18
PRKDC-201ENST00000314191 ATF3P18847 181 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 TTC5Q8N0Z6 440 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 ACEP12821 1306 aa7.66□□□□□ -1.18
PRKDC-201ENST00000314191 GBP4Q96PP9 640 aa7.65□□□□□ -1.18
PRKDC-201ENST00000314191 SPATA31E1Q6ZUB1 1445 aa7.65□□□□□ -1.18
PRKDC-201ENST00000314191 ZC3H6P61129 1189 aaKnown RBP7.65□□□□□ -1.18
PRKDC-201ENST00000314191 PLEKHH1Q9ULM0 1364 aa7.65□□□□□ -1.18
PRKDC-201ENST00000314191 CCDC30Q5VVM6 783 aa7.65□□□□□ -1.18
PRKDC-201ENST00000314191 GORABQ5T7V8 394 aa7.65□□□□□ -1.18
PRKDC-201ENST00000314191 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms