RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 WASHC2AQ641Q2 1341 aa12.59□□□□□ -0.39
USP15-202ENST00000312635 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.39
USP15-202ENST00000312635 WAPLQ7Z5K2 1190 aa12.58□□□□□ -0.4
USP15-202ENST00000312635 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
USP15-202ENST00000312635 PLEKHH1Q9ULM0 1364 aa12.58□□□□□ -0.4
USP15-202ENST00000312635 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
USP15-202ENST00000312635 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
USP15-202ENST00000312635 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
USP15-202ENST00000312635 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.42e-8■■■□□ 14.6
USP15-202ENST00000312635 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
USP15-202ENST00000312635 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
USP15-202ENST00000312635 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
USP15-202ENST00000312635 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
USP15-202ENST00000312635 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
USP15-202ENST00000312635 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
USP15-202ENST00000312635 DDX10Q13206 875 aaKnown RBP12.52□□□□□ -0.41
USP15-202ENST00000312635 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
USP15-202ENST00000312635 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.52□□□□□ -0.41
USP15-202ENST00000312635 ADGRL3Q9HAR2 1447 aa12.52□□□□□ -0.41
USP15-202ENST00000312635 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
USP15-202ENST00000312635 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
USP15-202ENST00000312635 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
USP15-202ENST00000312635 CABP2Q9NPB3 220 aa12.49□□□□□ -0.41
USP15-202ENST00000312635 ANKARQ7Z5J8 1434 aa12.49□□□□□ -0.41
USP15-202ENST00000312635 DCCP43146 1447 aa12.48□□□□□ -0.41
USP15-202ENST00000312635 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
USP15-202ENST00000312635 TMEM94Q12767 1356 aa12.48□□□□□ -0.41
USP15-202ENST00000312635 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
USP15-202ENST00000312635 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
USP15-202ENST00000312635 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
USP15-202ENST00000312635 LRRC7Q96NW7 1537 aa12.47□□□□□ -0.41
USP15-202ENST00000312635 NUDT16Q96DE0 195 aaKnown RBP12.46□□□□□ -0.41
USP15-202ENST00000312635 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
USP15-202ENST00000312635 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
USP15-202ENST00000312635 MYOM1P52179 1685 aa12.46□□□□□ -0.42
USP15-202ENST00000312635 ATP7BP35670 1465 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 PANK3Q9H999 370 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
USP15-202ENST00000312635 MSH6P52701 1360 aa12.44□□□□□ -0.42
USP15-202ENST00000312635 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
USP15-202ENST00000312635 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
USP15-202ENST00000312635 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
USP15-202ENST00000312635 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
USP15-202ENST00000312635 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
USP15-202ENST00000312635 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
USP15-202ENST00000312635 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
USP15-202ENST00000312635 ATF3P18847 181 aa12.42□□□□□ -0.42
USP15-202ENST00000312635 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
USP15-202ENST00000312635 CABP1Q9NZU7 370 aa12.42□□□□□ -0.42
USP15-202ENST00000312635 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
USP15-202ENST00000312635 LTBP4Q8N2S1 1624 aa12.42□□□□□ -0.42
USP15-202ENST00000312635 ITSN1Q15811 1721 aa12.41□□□□□ -0.42
USP15-202ENST00000312635 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
USP15-202ENST00000312635 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
USP15-202ENST00000312635 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
USP15-202ENST00000312635 USP32Q8NFA0 1604 aa12.41□□□□□ -0.42
USP15-202ENST00000312635 ANP32CO43423 234 aa12.41□□□□□ -0.42
USP15-202ENST00000312635 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
USP15-202ENST00000312635 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
USP15-202ENST00000312635 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.42
USP15-202ENST00000312635 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
USP15-202ENST00000312635 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
USP15-202ENST00000312635 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
USP15-202ENST00000312635 C1orf167Q5SNV9 1468 aa12.39□□□□□ -0.43
USP15-202ENST00000312635 MST1RQ04912 1400 aa12.39□□□□□ -0.43
USP15-202ENST00000312635 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
USP15-202ENST00000312635 CARD14Q9BXL6 1004 aa12.38□□□□□ -0.43
USP15-202ENST00000312635 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
USP15-202ENST00000312635 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
USP15-202ENST00000312635 NSD2O96028 1365 aa12.38□□□□□ -0.43
USP15-202ENST00000312635 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
USP15-202ENST00000312635 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
USP15-202ENST00000312635 ACEP12821 1306 aa12.37□□□□□ -0.43
USP15-202ENST00000312635 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
USP15-202ENST00000312635 RALBP1Q15311 655 aa12.37□□□□□ -0.43
USP15-202ENST00000312635 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
USP15-202ENST00000312635 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
USP15-202ENST00000312635 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
USP15-202ENST00000312635 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
USP15-202ENST00000312635 ESCO1Q5FWF5 840 aa12.35□□□□□ -0.43
USP15-202ENST00000312635 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
USP15-202ENST00000312635 USP6P35125 1406 aa12.35□□□□□ -0.43
USP15-202ENST00000312635 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
USP15-202ENST00000312635 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
USP15-202ENST00000312635 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
USP15-202ENST00000312635 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
USP15-202ENST00000312635 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
USP15-202ENST00000312635 PARD3Q8TEW0 1356 aa12.33□□□□□ -0.44
USP15-202ENST00000312635 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
USP15-202ENST00000312635 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
USP15-202ENST00000312635 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
USP15-202ENST00000312635 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
USP15-202ENST00000312635 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
USP15-202ENST00000312635 MIER1Q8N108 512 aa12.31□□□□□ -0.44
USP15-202ENST00000312635 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
USP15-202ENST00000312635 PSME1Q06323 249 aa12.3□□□□□ -0.44
USP15-202ENST00000312635 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms