RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
CHRNA9-201ENST00000310169 TECPR2O15040 1411 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 ADGRB1O14514 1584 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 TIMELESSQ9UNS1 1208 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
CHRNA9-201ENST00000310169 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
CHRNA9-201ENST00000310169 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
CHRNA9-201ENST00000310169 ADGRL3Q9HAR2 1447 aa13.82□□□□□ -0.2
CHRNA9-201ENST00000310169 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
CHRNA9-201ENST00000310169 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
CHRNA9-201ENST00000310169 NALCNQ8IZF0 1738 aa13.81□□□□□ -0.2
CHRNA9-201ENST00000310169 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
CHRNA9-201ENST00000310169 DCCP43146 1447 aa13.8□□□□□ -0.2
CHRNA9-201ENST00000310169 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
CHRNA9-201ENST00000310169 CARD11Q9BXL7 1154 aa13.79□□□□□ -0.2
CHRNA9-201ENST00000310169 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
CHRNA9-201ENST00000310169 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
CHRNA9-201ENST00000310169 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
CHRNA9-201ENST00000310169 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.21
CHRNA9-201ENST00000310169 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
CHRNA9-201ENST00000310169 HSPA1LP34931 641 aa13.75□□□□□ -0.21
CHRNA9-201ENST00000310169 CENPJQ9HC77 1338 aaPredicted RBP13.75□□□□□ -0.21
CHRNA9-201ENST00000310169 MST1RQ04912 1400 aa13.74□□□□□ -0.21
CHRNA9-201ENST00000310169 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
CHRNA9-201ENST00000310169 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
CHRNA9-201ENST00000310169 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
CHRNA9-201ENST00000310169 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
CHRNA9-201ENST00000310169 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
CHRNA9-201ENST00000310169 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
CHRNA9-201ENST00000310169 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
CHRNA9-201ENST00000310169 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
CHRNA9-201ENST00000310169 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
CHRNA9-201ENST00000310169 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
CHRNA9-201ENST00000310169 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
CHRNA9-201ENST00000310169 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
CHRNA9-201ENST00000310169 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
CHRNA9-201ENST00000310169 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
CHRNA9-201ENST00000310169 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
CHRNA9-201ENST00000310169 ADGRB2O60241 1585 aa13.68□□□□□ -0.22
CHRNA9-201ENST00000310169 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
CHRNA9-201ENST00000310169 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
CHRNA9-201ENST00000310169 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
CHRNA9-201ENST00000310169 FOXO3O43524 673 aa13.67□□□□□ -0.22
CHRNA9-201ENST00000310169 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
CHRNA9-201ENST00000310169 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
CHRNA9-201ENST00000310169 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
CHRNA9-201ENST00000310169 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
CHRNA9-201ENST00000310169 NPHP3Q7Z494 1330 aa13.65□□□□□ -0.22
CHRNA9-201ENST00000310169 ANKARQ7Z5J8 1434 aa13.65□□□□□ -0.22
CHRNA9-201ENST00000310169 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
CHRNA9-201ENST00000310169 USP47Q96K76 1375 aa13.65□□□□□ -0.22
CHRNA9-201ENST00000310169 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 XPCQ01831 940 aaPredicted RBP13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 PSME1Q06323 249 aa13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 MIER1Q8N108 512 aa13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 NGDNQ8NEJ9 315 aaKnown RBP13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
CHRNA9-201ENST00000310169 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
CHRNA9-201ENST00000310169 NHSL1Q5SYE7 1610 aa13.62□□□□□ -0.23
CHRNA9-201ENST00000310169 USP32Q8NFA0 1604 aa13.62□□□□□ -0.23
CHRNA9-201ENST00000310169 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
CHRNA9-201ENST00000310169 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
CHRNA9-201ENST00000310169 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
CHRNA9-201ENST00000310169 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
CHRNA9-201ENST00000310169 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
CHRNA9-201ENST00000310169 JCADQ9P266 1359 aa13.61□□□□□ -0.23
CHRNA9-201ENST00000310169 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHRNA9-201ENST00000310169 SOS2Q07890 1332 aaPredicted RBP13.6□□□□□ -0.23
CHRNA9-201ENST00000310169 ATP7BP35670 1465 aa13.6□□□□□ -0.23
CHRNA9-201ENST00000310169 TMF1P82094 1093 aa13.59□□□□□ -0.23
CHRNA9-201ENST00000310169 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
CHRNA9-201ENST00000310169 TESK2Q96S53 571 aa13.59□□□□□ -0.23
CHRNA9-201ENST00000310169 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
CHRNA9-201ENST00000310169 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
CHRNA9-201ENST00000310169 ACEP12821 1306 aa13.57□□□□□ -0.24
CHRNA9-201ENST00000310169 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
CHRNA9-201ENST00000310169 ATAD2Q6PL18 1390 aa13.57□□□□□ -0.24
CHRNA9-201ENST00000310169 PLEKHG3A1L390 1219 aa13.57□□□□□ -0.24
CHRNA9-201ENST00000310169 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
CHRNA9-201ENST00000310169 PXDNQ92626 1479 aa13.56□□□□□ -0.24
CHRNA9-201ENST00000310169 NUTM2BA6NNL0 878 aaPredicted RBP13.56□□□□□ -0.24
CHRNA9-201ENST00000310169 NUTM2EB1AL46 878 aaPredicted RBP13.56□□□□□ -0.24
CHRNA9-201ENST00000310169 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
CHRNA9-201ENST00000310169 NUTM2AQ8IVF1 878 aaPredicted RBP13.56□□□□□ -0.24
CHRNA9-201ENST00000310169 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
CHRNA9-201ENST00000310169 SPATA31A6Q5VVP1 1343 aa13.55□□□□□ -0.24
CHRNA9-201ENST00000310169 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
CHRNA9-201ENST00000310169 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
CHRNA9-201ENST00000310169 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
CHRNA9-201ENST00000310169 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
CHRNA9-201ENST00000310169 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
CHRNA9-201ENST00000310169 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
CHRNA9-201ENST00000310169 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
CHRNA9-201ENST00000310169 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
CHRNA9-201ENST00000310169 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms