RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
XCR1-201ENST00000309285 PRAM1Q96QH2 718 aa11.63□□□□□ -0.55
XCR1-201ENST00000309285 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
XCR1-201ENST00000309285 PREX2Q70Z35 1606 aa11.62□□□□□ -0.55
XCR1-201ENST00000309285 MSH5O43196 834 aa11.62□□□□□ -0.55
XCR1-201ENST00000309285 NRDCO43847 1150 aa11.62□□□□□ -0.55
XCR1-201ENST00000309285 PDE4AP27815 886 aa11.62□□□□□ -0.55
XCR1-201ENST00000309285 MYO5CQ9NQX4 1742 aa11.62□□□□□ -0.55
XCR1-201ENST00000309285 ZNF518AQ6AHZ1 1483 aa11.61□□□□□ -0.55
XCR1-201ENST00000309285 FBXO31Q5XUX0 539 aaPredicted RBP11.61□□□□□ -0.55
XCR1-201ENST00000309285 PARD3Q8TEW0 1356 aa11.61□□□□□ -0.55
XCR1-201ENST00000309285 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
XCR1-201ENST00000309285 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
XCR1-201ENST00000309285 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
XCR1-201ENST00000309285 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
XCR1-201ENST00000309285 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
XCR1-201ENST00000309285 KIAA2012Q0VF49 1180 aa11.6□□□□□ -0.55
XCR1-201ENST00000309285 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
XCR1-201ENST00000309285 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
XCR1-201ENST00000309285 GPRASP1Q5JY77 1395 aa11.59□□□□□ -0.55
XCR1-201ENST00000309285 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
XCR1-201ENST00000309285 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
XCR1-201ENST00000309285 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
XCR1-201ENST00000309285 MAST1Q9Y2H9 1570 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 NSD3Q9BZ95 1437 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 GBP4Q96PP9 640 aa11.58□□□□□ -0.56
XCR1-201ENST00000309285 COL17A1Q9UMD9 1497 aaPredicted RBP11.57□□□□□ -0.56
XCR1-201ENST00000309285 MS4A1P11836 297 aa11.57□□□□□ -0.56
XCR1-201ENST00000309285 CFAP65Q6ZU64 1925 aaKnown RBP11.57□□□□□ -0.56
XCR1-201ENST00000309285 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
XCR1-201ENST00000309285 ZCCHC11Q5TAX3 1644 aaKnown RBP11.56□□□□□ -0.56
XCR1-201ENST00000309285 EID1Q9Y6B2 187 aa11.56□□□□□ -0.56
XCR1-201ENST00000309285 KDM5CP41229 1560 aa11.56□□□□□ -0.56
XCR1-201ENST00000309285 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
XCR1-201ENST00000309285 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
XCR1-201ENST00000309285 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
XCR1-201ENST00000309285 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
XCR1-201ENST00000309285 CENPQQ7L2Z9 268 aaPredicted RBP11.55□□□□□ -0.56
XCR1-201ENST00000309285 ABCC1P33527 1531 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 BCAR3O75815 825 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 ZNF771Q7L3S4 317 aaPredicted RBP11.55□□□□□ -0.56
XCR1-201ENST00000309285 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 CCDC9Q9Y3X0 531 aaKnown RBP11.55□□□□□ -0.56
XCR1-201ENST00000309285 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
XCR1-201ENST00000309285 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 FAM43AQ8N2R8 423 aa11.55□□□□□ -0.56
XCR1-201ENST00000309285 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
XCR1-201ENST00000309285 CROCC2H7BZ55 1655 aa11.54□□□□□ -0.56
XCR1-201ENST00000309285 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
XCR1-201ENST00000309285 RIPK4P57078 832 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
XCR1-201ENST00000309285 PANK1Q8TE04 598 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 COG3Q96JB2 828 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 ATP10AO60312 1499 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 ELL2O00472 640 aaPredicted RBP11.53□□□□□ -0.56
XCR1-201ENST00000309285 SLFN5Q08AF3 891 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 C20orf194Q5TEA3 1177 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 LRPPRCP42704 1394 aaKnown RBP11.53□□□□□ -0.56
XCR1-201ENST00000309285 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
XCR1-201ENST00000309285 CHMP4BQ9H444 224 aaKnown RBP11.53□□□□□ -0.56
XCR1-201ENST00000309285 GOLGA6L4A6NEF3 574 aa11.52□□□□□ -0.56
XCR1-201ENST00000309285 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.56
XCR1-201ENST00000309285 DRC7Q8IY82 874 aa11.52□□□□□ -0.56
XCR1-201ENST00000309285 CLSTN1O94985 981 aa11.52□□□□□ -0.57
XCR1-201ENST00000309285 HMOX1P09601 288 aa11.52□□□□□ -0.57
XCR1-201ENST00000309285 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
XCR1-201ENST00000309285 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
XCR1-201ENST00000309285 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
XCR1-201ENST00000309285 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
XCR1-201ENST00000309285 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
XCR1-201ENST00000309285 BCORL1Q5H9F3 1711 aa11.51□□□□□ -0.57
XCR1-201ENST00000309285 RBM10P98175 930 aaKnown RBP11.5□□□□□ -0.57
XCR1-201ENST00000309285 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
XCR1-201ENST00000309285 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
XCR1-201ENST00000309285 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
XCR1-201ENST00000309285 ASXL1Q8IXJ9 1541 aa11.49□□□□□ -0.57
XCR1-201ENST00000309285 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
XCR1-201ENST00000309285 SKAP1Q86WV1 359 aa11.49□□□□□ -0.57
XCR1-201ENST00000309285 LTV1Q96GA3 475 aaPredicted RBP11.49□□□□□ -0.57
XCR1-201ENST00000309285 ATAD2Q6PL18 1390 aa11.49□□□□□ -0.57
XCR1-201ENST00000309285 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
XCR1-201ENST00000309285 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
XCR1-201ENST00000309285 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
XCR1-201ENST00000309285 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
XCR1-201ENST00000309285 NPATQ14207 1427 aa11.48□□□□□ -0.57
XCR1-201ENST00000309285 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
XCR1-201ENST00000309285 SLC26A8Q96RN1 970 aa11.47□□□□□ -0.57
XCR1-201ENST00000309285 ZFYVE16Q7Z3T8 1539 aa11.47□□□□□ -0.57
XCR1-201ENST00000309285 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
XCR1-201ENST00000309285 MFAP1P55081 439 aaKnown RBP11.47□□□□□ -0.57
XCR1-201ENST00000309285 CHMP3Q9Y3E7 222 aa11.47□□□□□ -0.57
XCR1-201ENST00000309285 FAM161AQ3B820 660 aa11.46□□□□□ -0.57
XCR1-201ENST00000309285 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
XCR1-201ENST00000309285 PTPRTO14522 1441 aa11.46□□□□□ -0.57
XCR1-201ENST00000309285 PLEKHH1Q9ULM0 1364 aa11.46□□□□□ -0.57
XCR1-201ENST00000309285 DZIP1LQ8IYY4 767 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms