RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 PUS7Q96PZ0 661 aaKnown RBP13.72□□□□□ -0.21
PCDHGC4-201ENST00000306593 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC4-201ENST00000306593 TTC37Q6PGP7 1564 aa13.72□□□□□ -0.21
PCDHGC4-201ENST00000306593 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
PCDHGC4-201ENST00000306593 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC4-201ENST00000306593 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
PCDHGC4-201ENST00000306593 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.21
PCDHGC4-201ENST00000306593 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
PCDHGC4-201ENST00000306593 HSP90AB1P08238 724 aaKnown RBP13.71□□□□□ -0.21
PCDHGC4-201ENST00000306593 PIK3C2GO75747 1445 aa13.71□□□□□ -0.22
PCDHGC4-201ENST00000306593 GNAI1P63096 354 aa13.71□□□□□ -0.22
PCDHGC4-201ENST00000306593 NKTRP30414 1462 aaKnown RBP13.7□□□□□ -0.22
PCDHGC4-201ENST00000306593 SOX12O15370 315 aa13.7□□□□□ -0.22
PCDHGC4-201ENST00000306593 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
PCDHGC4-201ENST00000306593 ABCC1P33527 1531 aa13.7□□□□□ -0.22
PCDHGC4-201ENST00000306593 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
PCDHGC4-201ENST00000306593 HMMRO75330 724 aa13.69□□□□□ -0.22
PCDHGC4-201ENST00000306593 STK31Q9BXU1 1019 aa13.69□□□□□ -0.22
PCDHGC4-201ENST00000306593 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
PCDHGC4-201ENST00000306593 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
PCDHGC4-201ENST00000306593 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
PCDHGC4-201ENST00000306593 ARAP3Q8WWN8 1544 aa13.68□□□□□ -0.22
PCDHGC4-201ENST00000306593 AMPHP49418 695 aa13.68□□□□□ -0.22
PCDHGC4-201ENST00000306593 ATP10AO60312 1499 aa13.67□□□□□ -0.22
PCDHGC4-201ENST00000306593 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
PCDHGC4-201ENST00000306593 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
PCDHGC4-201ENST00000306593 IDI1Q13907 227 aa13.67□□□□□ -0.22
PCDHGC4-201ENST00000306593 DUSP27Q5VZP5 1158 aa13.67□□□□□ -0.22
PCDHGC4-201ENST00000306593 PTMSP20962 102 aa13.66□□□□□ -0.22
PCDHGC4-201ENST00000306593 ZCCHC11Q5TAX3 1644 aaKnown RBP13.66□□□□□ -0.22
PCDHGC4-201ENST00000306593 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
PCDHGC4-201ENST00000306593 IQGAP3Q86VI3 1631 aa13.66□□□□□ -0.22
PCDHGC4-201ENST00000306593 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 TRPM2O94759 1503 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 UNC13BO14795 1591 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 BCAR3O75815 825 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
PCDHGC4-201ENST00000306593 MCCP23508 829 aa13.64□□□□□ -0.23
PCDHGC4-201ENST00000306593 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC4-201ENST00000306593 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC4-201ENST00000306593 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
PCDHGC4-201ENST00000306593 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
PCDHGC4-201ENST00000306593 FCHSD2O94868 740 aa13.63□□□□□ -0.23
PCDHGC4-201ENST00000306593 RNF123Q5XPI4 1314 aa13.63□□□□□ -0.23
PCDHGC4-201ENST00000306593 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
PCDHGC4-201ENST00000306593 ANKRD36BQ8N2N9 1353 aa13.63□□□□□ -0.23
PCDHGC4-201ENST00000306593 NCLP19338 710 aaKnown RBP13.63□□□□□ -0.23
PCDHGC4-201ENST00000306593 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 EXOSC9Q06265 439 aaKnown RBP13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 POGZQ7Z3K3 1410 aa13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 PTPRTO14522 1441 aa13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 NEO1Q92859 1461 aa13.61□□□□□ -0.23
PCDHGC4-201ENST00000306593 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
PCDHGC4-201ENST00000306593 GBP4Q96PP9 640 aa13.6□□□□□ -0.23
PCDHGC4-201ENST00000306593 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
PCDHGC4-201ENST00000306593 OS9Q13438 667 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 HMOX1P09601 288 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 SBNO2Q9Y2G9 1366 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 MVPQ14764 893 aaKnown RBP13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 MYOM2P54296 1465 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 PLA2R1Q13018 1463 aa13.59□□□□□ -0.23
PCDHGC4-201ENST00000306593 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 CDC42BPBQ9Y5S2 1711 aa13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 ELL2O00472 640 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC4-201ENST00000306593 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
PCDHGC4-201ENST00000306593 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
PCDHGC4-201ENST00000306593 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
PCDHGC4-201ENST00000306593 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
PCDHGC4-201ENST00000306593 TRIM44Q96DX7 344 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC4-201ENST00000306593 TET3O43151 1660 aa13.56□□□□□ -0.24
PCDHGC4-201ENST00000306593 NPHP1O15259 732 aa13.56□□□□□ -0.24
PCDHGC4-201ENST00000306593 KDM5AP29375 1690 aaKnown RBP13.56□□□□□ -0.24
PCDHGC4-201ENST00000306593 SYNMO15061 1565 aa13.56□□□□□ -0.24
PCDHGC4-201ENST00000306593 IL16Q14005 1332 aa13.56□□□□□ -0.24
PCDHGC4-201ENST00000306593 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
PCDHGC4-201ENST00000306593 TSR2Q969E8 191 aaKnown RBP13.55□□□□□ -0.24
PCDHGC4-201ENST00000306593 TRPM1Q7Z4N2 1603 aa13.55□□□□□ -0.24
PCDHGC4-201ENST00000306593 PDZRN3Q9UPQ7 1066 aa13.55□□□□□ -0.24
PCDHGC4-201ENST00000306593 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
PCDHGC4-201ENST00000306593 NFE2L2Q16236 605 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 FBXO31Q5XUX0 539 aaPredicted RBP13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 ERCC6L2Q5T890 1561 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
PCDHGC4-201ENST00000306593 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
PCDHGC4-201ENST00000306593 CARD14Q9BXL6 1004 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms