RNA–Protein interactions for RNA: ENST00000305031.4

CHSY3-201, Transcript of chondroitin sulfate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY3, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY3-201ENST00000305031 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
CHSY3-201ENST00000305031 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
CHSY3-201ENST00000305031 ASXL2Q76L83 1435 aa20.19■□□□□ 0.82
CHSY3-201ENST00000305031 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
CHSY3-201ENST00000305031 SHANK2Q9UPX8 1470 aa20.19■□□□□ 0.82
CHSY3-201ENST00000305031 DIAPH1O60610 1272 aaKnown RBP20.19■□□□□ 0.82
CHSY3-201ENST00000305031 CARD14Q9BXL6 1004 aa20.19■□□□□ 0.82
CHSY3-201ENST00000305031 ERCC6L2Q5T890 1561 aa20.19■□□□□ 0.82
CHSY3-201ENST00000305031 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
CHSY3-201ENST00000305031 CFAP65Q6ZU64 1925 aaKnown RBP20.18■□□□□ 0.82
CHSY3-201ENST00000305031 DUSP27Q5VZP5 1158 aa20.18■□□□□ 0.82
CHSY3-201ENST00000305031 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
CHSY3-201ENST00000305031 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
CHSY3-201ENST00000305031 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
CHSY3-201ENST00000305031 KDM5BQ9UGL1 1544 aa20.18■□□□□ 0.82
CHSY3-201ENST00000305031 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
CHSY3-201ENST00000305031 LTV1Q96GA3 475 aaPredicted RBP20.18■□□□□ 0.82
CHSY3-201ENST00000305031 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
CHSY3-201ENST00000305031 WWC1Q8IX03 1113 aa20.17■□□□□ 0.82
CHSY3-201ENST00000305031 GBP4Q96PP9 640 aa20.17■□□□□ 0.82
CHSY3-201ENST00000305031 ABCA8O94911 1581 aa20.17■□□□□ 0.82
CHSY3-201ENST00000305031 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
CHSY3-201ENST00000305031 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
CHSY3-201ENST00000305031 UHRF1BP1Q6BDS2 1440 aa20.16■□□□□ 0.82
CHSY3-201ENST00000305031 TRAK2O60296 914 aa20.16■□□□□ 0.82
CHSY3-201ENST00000305031 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
CHSY3-201ENST00000305031 DUOX2Q9NRD8 1548 aa20.15■□□□□ 0.82
CHSY3-201ENST00000305031 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.82
CHSY3-201ENST00000305031 EXOSC9Q06265 439 aaKnown RBP20.14■□□□□ 0.81
CHSY3-201ENST00000305031 SCAF11Q99590 1463 aaKnown RBP20.14■□□□□ 0.81
CHSY3-201ENST00000305031 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
CHSY3-201ENST00000305031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHSY3-201ENST00000305031 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
CHSY3-201ENST00000305031 NECTIN2Q92692 538 aa20.12■□□□□ 0.81
CHSY3-201ENST00000305031 PANK2Q9BZ23 570 aa20.12■□□□□ 0.81
CHSY3-201ENST00000305031 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
CHSY3-201ENST00000305031 COG3Q96JB2 828 aa20.11■□□□□ 0.81
CHSY3-201ENST00000305031 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
CHSY3-201ENST00000305031 NUTM2GQ5VZR2 741 aa20.11■□□□□ 0.81
CHSY3-201ENST00000305031 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
CHSY3-201ENST00000305031 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
CHSY3-201ENST00000305031 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
CHSY3-201ENST00000305031 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
CHSY3-201ENST00000305031 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
CHSY3-201ENST00000305031 C14orf93Q9H972 538 aaKnown RBP20.1■□□□□ 0.81
CHSY3-201ENST00000305031 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
CHSY3-201ENST00000305031 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
CHSY3-201ENST00000305031 PLEKHH1Q9ULM0 1364 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 SLC26A8Q96RN1 970 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 WDR7Q9Y4E6 1490 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
CHSY3-201ENST00000305031 FAM13BQ9NYF5 915 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 ARHGEF12Q9NZN5 1544 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 PLA2R1Q13018 1463 aa20.09■□□□□ 0.81
CHSY3-201ENST00000305031 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
CHSY3-201ENST00000305031 RNF214Q8ND24 703 aa20.07■□□□□ 0.8
CHSY3-201ENST00000305031 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
CHSY3-201ENST00000305031 CASC1Q6TDU7 716 aa20.06■□□□□ 0.8
CHSY3-201ENST00000305031 RBM10P98175 930 aaKnown RBP20.06■□□□□ 0.8
CHSY3-201ENST00000305031 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
CHSY3-201ENST00000305031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.05■□□□□ 0.8
CHSY3-201ENST00000305031 TBC1D2Q9BYX2 928 aa20.05■□□□□ 0.8
CHSY3-201ENST00000305031 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
CHSY3-201ENST00000305031 TRIM6-TRIM34B2RNG4 842 aa20.04■□□□□ 0.8
CHSY3-201ENST00000305031 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
CHSY3-201ENST00000305031 AMPHP49418 695 aa20.03■□□□□ 0.8
CHSY3-201ENST00000305031 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
CHSY3-201ENST00000305031 MCTP1Q6DN14 999 aa20.03■□□□□ 0.8
CHSY3-201ENST00000305031 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
CHSY3-201ENST00000305031 CDC42BPAQ5VT25 1732 aa20.02■□□□□ 0.8
CHSY3-201ENST00000305031 MCM4P33991 863 aa20.02■□□□□ 0.8
CHSY3-201ENST00000305031 COL17A1Q9UMD9 1497 aaPredicted RBP20.02■□□□□ 0.8
CHSY3-201ENST00000305031 RLBP1P12271 317 aa20.01■□□□□ 0.79
CHSY3-201ENST00000305031 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
CHSY3-201ENST00000305031 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
CHSY3-201ENST00000305031 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
CHSY3-201ENST00000305031 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
CHSY3-201ENST00000305031 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
CHSY3-201ENST00000305031 BCORL1Q5H9F3 1711 aa20■□□□□ 0.79
CHSY3-201ENST00000305031 CHMP3Q9Y3E7 222 aa20■□□□□ 0.79
CHSY3-201ENST00000305031 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
CHSY3-201ENST00000305031 OS9Q13438 667 aaPredicted RBP19.99■□□□□ 0.79
CHSY3-201ENST00000305031 KDM5CP41229 1560 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 NGEFQ8N5V2 710 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 RILPL2Q969X0 211 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
CHSY3-201ENST00000305031 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 PDE3AQ14432 1141 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 DDX19BQ9UMR2 479 aa19.98■□□□□ 0.79
CHSY3-201ENST00000305031 NME9Q86XW9 330 aa19.97■□□□□ 0.79
CHSY3-201ENST00000305031 GPRASP1Q5JY77 1395 aa19.97■□□□□ 0.79
CHSY3-201ENST00000305031 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
CHSY3-201ENST00000305031 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
CHSY3-201ENST00000305031 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
CHSY3-201ENST00000305031 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
CHSY3-201ENST00000305031 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
CHSY3-201ENST00000305031 KCNJ4P48050 445 aa19.96■□□□□ 0.79
CHSY3-201ENST00000305031 R3HCC1Q9Y3T6 440 aaKnown RBP19.95■□□□□ 0.78
CHSY3-201ENST00000305031 CHD1O14646 1710 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms