RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 C9orf78Q9NZ63 289 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 SLC3A2P08195 630 aaKnown RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
PCNX1-201ENST00000304743 CT47B1P0C2W7 299 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 POTEJP0CG39 1038 aa9.69□□□□□ -0.86
PCNX1-201ENST00000304743 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 CWC15Q9P013 229 aaKnown RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 FOXD4L6Q3SYB3 417 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
PCNX1-201ENST00000304743 FOXD4L3Q6VB84 417 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-201ENST00000304743 RAB3IL1Q8TBN0 382 aa9.69□□□□□ -0.86
PCNX1-201ENST00000304743 OLFM4Q6UX06 510 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 BICD2Q8TD16 824 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 ZHX3Q9H4I2 956 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-201ENST00000304743 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 RSPH6AQ9H0K4 717 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 TTLL5Q6EMB2 1281 aa9.68□□□□□ -0.86
PCNX1-201ENST00000304743 SSR1P43307 286 aaKnown RBP9.68□□□□□ -0.86
PCNX1-201ENST00000304743 SMARCE1Q969G3 411 aa9.67□□□□□ -0.86
PCNX1-201ENST00000304743 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
PCNX1-201ENST00000304743 CETN2P41208 172 aa9.66□□□□□ -0.86
PCNX1-201ENST00000304743 MAPK8IP2Q13387 824 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 WDR78Q5VTH9 848 aa9.66□□□□□ -0.86
PCNX1-201ENST00000304743 TTLL12Q14166 644 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 NOC2LQ9Y3T9 749 aaKnown RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
PCNX1-201ENST00000304743 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 TIGD1Q96MW7 591 aa9.66□□□□□ -0.86
PCNX1-201ENST00000304743 CENPJQ9HC77 1338 aaPredicted RBP9.66□□□□□ -0.86
PCNX1-201ENST00000304743 C16orf71Q8IYS4 520 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-201ENST00000304743 SEPT6Q14141 434 aa9.65□□□□□ -0.86
PCNX1-201ENST00000304743 ZSCAN29Q8IWY8 852 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-201ENST00000304743 BMS1Q14692 1282 aaKnown RBP9.65□□□□□ -0.87
PCNX1-201ENST00000304743 DDX58O95786 925 aaKnown RBP9.65□□□□□ -0.87
PCNX1-201ENST00000304743 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.87
PCNX1-201ENST00000304743 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 FILIP1LQ4L180 1135 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 PDILTQ8N807 584 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 HMGB2P26583 209 aaKnown RBP9.64□□□□□ -0.87
PCNX1-201ENST00000304743 FERMT1Q9BQL6 677 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 TANGO6Q9C0B7 1094 aa9.64□□□□□ -0.87
PCNX1-201ENST00000304743 TXLNBQ8N3L3 684 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 KIAA0754O94854 1291 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 ARL1P40616 181 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-201ENST00000304743 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 LRRC45Q96CN5 670 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
PCNX1-201ENST00000304743 TRIM5Q9C035 493 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 NAT10Q9H0A0 1025 aaKnown RBP9.63□□□□□ -0.87
PCNX1-201ENST00000304743 DDX11L8A8MPP1 907 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 IFIT2P09913 472 aaKnown RBP9.63□□□□□ -0.87
PCNX1-201ENST00000304743 CENPHQ9H3R5 247 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 SH3BP5O60239 455 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 LEKR1Q6ZMV7 388 aa9.63□□□□□ -0.87
PCNX1-201ENST00000304743 CCDC73Q6ZRK6 1079 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
PCNX1-201ENST00000304743 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 TAF3Q5VWG9 929 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 WASHC4Q2M389 1173 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 TNIP1Q15025 636 aa9.62□□□□□ -0.87
PCNX1-201ENST00000304743 PLIN1O60240 522 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 BCL2L13Q9BXK5 485 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 BMP2KQ9NSY1 1161 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-201ENST00000304743 MAP2K1Q02750 393 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-201ENST00000304743 SLC26A8Q96RN1 970 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 VTI1AQ96AJ9 217 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-201ENST00000304743 TRIM22Q8IYM9 498 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 ANO2Q9NQ90 1003 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-201ENST00000304743 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
PCNX1-201ENST00000304743 PIP4K2AP48426 406 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-201ENST00000304743 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
PCNX1-201ENST00000304743 CCDC39Q9UFE4 941 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 ZNF76P36508 570 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 ATP6V1E1P36543 226 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 JAKMIP3Q5VZ66 844 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 TMOD2Q9NZR1 351 aa9.6□□□□□ -0.87
PCNX1-201ENST00000304743 G3BP1Q13283 466 aaKnown RBP eCLIP9.6□□□□□ -0.87
PCNX1-201ENST00000304743 GRM1Q13255 1194 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 ZNF354CQ86Y25 554 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 EIF2S2P20042 333 aaKnown RBP9.59□□□□□ -0.87
PCNX1-201ENST00000304743 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.59□□□□□ -0.87
PCNX1-201ENST00000304743 DDX49Q9Y6V7 483 aaKnown RBP9.59□□□□□ -0.87
PCNX1-201ENST00000304743 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
PCNX1-201ENST00000304743 CGNL1Q0VF96 1302 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 E9PSI1 815 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 STIM1Q13586 685 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 OPA1O60313 960 aa9.59□□□□□ -0.87
PCNX1-201ENST00000304743 RIOK3O14730 519 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms