RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
CLCC1-201ENST00000302500 USP32Q8NFA0 1604 aa16.6■□□□□ 0.25
CLCC1-201ENST00000302500 LRP6O75581 1613 aa16.6■□□□□ 0.25
CLCC1-201ENST00000302500 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.25
CLCC1-201ENST00000302500 ATF3P18847 181 aa16.58■□□□□ 0.24
CLCC1-201ENST00000302500 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
CLCC1-201ENST00000302500 STAC3Q96MF2 364 aa16.57■□□□□ 0.24
CLCC1-201ENST00000302500 RGS17Q9UGC6 210 aaPredicted RBP16.57■□□□□ 0.24
CLCC1-201ENST00000302500 PXDNQ92626 1479 aa16.55■□□□□ 0.24
CLCC1-201ENST00000302500 JCADQ9P266 1359 aa16.55■□□□□ 0.24
CLCC1-201ENST00000302500 COL22A1Q8NFW1 1626 aaPredicted RBP16.55■□□□□ 0.24
CLCC1-201ENST00000302500 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
CLCC1-201ENST00000302500 DCAF11Q8TEB1 546 aa16.53■□□□□ 0.24
CLCC1-201ENST00000302500 ORAI2Q96SN7 254 aa16.52■□□□□ 0.24
CLCC1-201ENST00000302500 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.24
CLCC1-201ENST00000302500 SOS2Q07890 1332 aaPredicted RBP16.52■□□□□ 0.23
CLCC1-201ENST00000302500 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
CLCC1-201ENST00000302500 STK26Q9P289 416 aa16.51■□□□□ 0.23
CLCC1-201ENST00000302500 KIF1AQ12756 1690 aa16.51■□□□□ 0.23
CLCC1-201ENST00000302500 PNPLA6Q8IY17 1366 aa16.49■□□□□ 0.23
CLCC1-201ENST00000302500 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
CLCC1-201ENST00000302500 TRPM3Q9HCF6 1732 aaPredicted RBP16.47■□□□□ 0.23
CLCC1-201ENST00000302500 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
CLCC1-201ENST00000302500 PRAM1Q96QH2 718 aa16.46■□□□□ 0.23
CLCC1-201ENST00000302500 SIN3AQ96ST3 1273 aa16.46■□□□□ 0.23
CLCC1-201ENST00000302500 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.23
CLCC1-201ENST00000302500 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
CLCC1-201ENST00000302500 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
CLCC1-201ENST00000302500 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
CLCC1-201ENST00000302500 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
CLCC1-201ENST00000302500 ABCA3Q99758 1704 aa16.44■□□□□ 0.22
CLCC1-201ENST00000302500 ATP7BP35670 1465 aa16.44■□□□□ 0.22
CLCC1-201ENST00000302500 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
CLCC1-201ENST00000302500 NBPF1Q3BBV0 1214 aa16.44■□□□□ 0.22
CLCC1-201ENST00000302500 MARF1Q9Y4F3 1742 aaKnown RBP16.43■□□□□ 0.22
CLCC1-201ENST00000302500 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
CLCC1-201ENST00000302500 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
CLCC1-201ENST00000302500 ALS2Q96Q42 1657 aa16.41■□□□□ 0.22
CLCC1-201ENST00000302500 GPRASP1Q5JY77 1395 aa16.4■□□□□ 0.22
CLCC1-201ENST00000302500 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
CLCC1-201ENST00000302500 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
CLCC1-201ENST00000302500 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
CLCC1-201ENST00000302500 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
CLCC1-201ENST00000302500 NPHP3Q7Z494 1330 aa16.38■□□□□ 0.21
CLCC1-201ENST00000302500 SOCS7O14512 581 aa16.38■□□□□ 0.21
CLCC1-201ENST00000302500 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
CLCC1-201ENST00000302500 NBPF8Q3BBV2 869 aa16.37■□□□□ 0.21
CLCC1-201ENST00000302500 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
CLCC1-201ENST00000302500 FOXO3O43524 673 aa16.36■□□□□ 0.21
CLCC1-201ENST00000302500 SAFB2Q14151 953 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLCC1-201ENST00000302500 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
CLCC1-201ENST00000302500 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
CLCC1-201ENST00000302500 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
CLCC1-201ENST00000302500 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.21
CLCC1-201ENST00000302500 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.2
CLCC1-201ENST00000302500 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
CLCC1-201ENST00000302500 SBNO1A3KN83 1393 aa16.33■□□□□ 0.2
CLCC1-201ENST00000302500 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
CLCC1-201ENST00000302500 POGKQ9P215 609 aa16.32■□□□□ 0.2
CLCC1-201ENST00000302500 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
CLCC1-201ENST00000302500 POLR3AO14802 1390 aaPredicted RBP16.31■□□□□ 0.2
CLCC1-201ENST00000302500 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
CLCC1-201ENST00000302500 EIF3AQ14152 1382 aaKnown RBP16.3■□□□□ 0.2
CLCC1-201ENST00000302500 EP400Q96L91 3159 aa16.3■□□□□ 0.2
CLCC1-201ENST00000302500 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
CLCC1-201ENST00000302500 SLIT2O94813 1529 aa16.28■□□□□ 0.2
CLCC1-201ENST00000302500 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
CLCC1-201ENST00000302500 CDK12Q9NYV4 1490 aaPredicted RBP16.28■□□□□ 0.2
CLCC1-201ENST00000302500 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
CLCC1-201ENST00000302500 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
CLCC1-201ENST00000302500 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
CLCC1-201ENST00000302500 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.19
CLCC1-201ENST00000302500 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.19
CLCC1-201ENST00000302500 NRAPQ86VF7 1730 aa16.27■□□□□ 0.19
CLCC1-201ENST00000302500 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
CLCC1-201ENST00000302500 AFF2P51816 1311 aa16.26■□□□□ 0.19
CLCC1-201ENST00000302500 NWD2Q9ULI1 1742 aa16.26■□□□□ 0.19
CLCC1-201ENST00000302500 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
CLCC1-201ENST00000302500 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
CLCC1-201ENST00000302500 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
CLCC1-201ENST00000302500 PMFBP1Q8TBY8 1022 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
CLCC1-201ENST00000302500 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 AKAP12Q02952 1782 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 ROCK2O75116 1388 aaKnown RBP16.25■□□□□ 0.19
CLCC1-201ENST00000302500 ATRNO75882 1429 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
CLCC1-201ENST00000302500 PLEKHG3A1L390 1219 aa16.24■□□□□ 0.19
CLCC1-201ENST00000302500 ZNF772Q68DY9 489 aaPredicted RBP16.22■□□□□ 0.19
CLCC1-201ENST00000302500 GLI3P10071 1580 aa16.22■□□□□ 0.19
CLCC1-201ENST00000302500 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
CLCC1-201ENST00000302500 RGS12O14924 1447 aa16.21■□□□□ 0.19
CLCC1-201ENST00000302500 CCDC61Q9Y6R9 512 aa16.2■□□□□ 0.18
CLCC1-201ENST00000302500 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
CLCC1-201ENST00000302500 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 ADAMTS2O95450 1211 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
CLCC1-201ENST00000302500 CD163L1Q9NR16 1453 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms