RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
SMG8-201ENST00000300917 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
SMG8-201ENST00000300917 SETBP1Q9Y6X0 1596 aa19.24■□□□□ 0.67
SMG8-201ENST00000300917 CGNL1Q0VF96 1302 aa19.24■□□□□ 0.67
SMG8-201ENST00000300917 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
SMG8-201ENST00000300917 ZMYM4Q5VZL5 1548 aa19.24■□□□□ 0.67
SMG8-201ENST00000300917 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
SMG8-201ENST00000300917 FBLN1P23142 703 aa19.23■□□□□ 0.67
SMG8-201ENST00000300917 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
SMG8-201ENST00000300917 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
SMG8-201ENST00000300917 TXNDC2Q86VQ3 553 aa19.22■□□□□ 0.67
SMG8-201ENST00000300917 CLTCQ00610 1675 aaKnown RBP19.22■□□□□ 0.67
SMG8-201ENST00000300917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMG8-201ENST00000300917 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
SMG8-201ENST00000300917 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
SMG8-201ENST00000300917 GOLGA2Q08379 1002 aa19.22■□□□□ 0.67
SMG8-201ENST00000300917 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
SMG8-201ENST00000300917 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
SMG8-201ENST00000300917 NUTM2FA1L443 756 aa19.2■□□□□ 0.66
SMG8-201ENST00000300917 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
SMG8-201ENST00000300917 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
SMG8-201ENST00000300917 NPC1L1Q9UHC9 1359 aa19.2■□□□□ 0.66
SMG8-201ENST00000300917 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
SMG8-201ENST00000300917 ZC3H13Q5T200 1668 aaKnown RBP19.19■□□□□ 0.66
SMG8-201ENST00000300917 RIMS2Q9UQ26 1411 aa19.19■□□□□ 0.66
SMG8-201ENST00000300917 NCKAP5LQ9HCH0 1330 aa19.18■□□□□ 0.66
SMG8-201ENST00000300917 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
SMG8-201ENST00000300917 U2SURPO15042 1029 aaKnown RBP19.18■□□□□ 0.66
SMG8-201ENST00000300917 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
SMG8-201ENST00000300917 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
SMG8-201ENST00000300917 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMG8-201ENST00000300917 CRBNQ96SW2 442 aa19.17■□□□□ 0.66
SMG8-201ENST00000300917 MYO3AQ8NEV4 1616 aa19.16■□□□□ 0.66
SMG8-201ENST00000300917 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
SMG8-201ENST00000300917 SKAP1Q86WV1 359 aa19.15■□□□□ 0.66
SMG8-201ENST00000300917 ANKRD36BQ8N2N9 1353 aa19.15■□□□□ 0.66
SMG8-201ENST00000300917 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
SMG8-201ENST00000300917 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.65
SMG8-201ENST00000300917 ZFYVE9O95405 1425 aa19.14■□□□□ 0.65
SMG8-201ENST00000300917 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 KIF13AQ9H1H9 1805 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 PTPRMP28827 1452 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 METP08581 1390 aa19.13■□□□□ 0.65
SMG8-201ENST00000300917 ALKQ9UM73 1620 aa19.12■□□□□ 0.65
SMG8-201ENST00000300917 TCP11L2Q8N4U5 519 aa19.12■□□□□ 0.65
SMG8-201ENST00000300917 FYB1O15117 783 aa19.12■□□□□ 0.65
SMG8-201ENST00000300917 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
SMG8-201ENST00000300917 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
SMG8-201ENST00000300917 BCAR3O75815 825 aa19.11■□□□□ 0.65
SMG8-201ENST00000300917 AGLP35573 1532 aa19.11■□□□□ 0.65
SMG8-201ENST00000300917 ZNF521Q96K83 1311 aa19.11■□□□□ 0.65
SMG8-201ENST00000300917 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
SMG8-201ENST00000300917 TNRQ92752 1358 aa19.09■□□□□ 0.65
SMG8-201ENST00000300917 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
SMG8-201ENST00000300917 WWC1Q8IX03 1113 aa19.08■□□□□ 0.65
SMG8-201ENST00000300917 ARHGEF40Q8TER5 1519 aa19.08■□□□□ 0.64
SMG8-201ENST00000300917 ATAD2Q6PL18 1390 aa19.07■□□□□ 0.64
SMG8-201ENST00000300917 LTKP29376 864 aa19.06■□□□□ 0.64
SMG8-201ENST00000300917 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
SMG8-201ENST00000300917 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
SMG8-201ENST00000300917 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
SMG8-201ENST00000300917 INSRP06213 1382 aa19.05■□□□□ 0.64
SMG8-201ENST00000300917 FRAT1Q92837 279 aaPredicted RBP19.04■□□□□ 0.64
SMG8-201ENST00000300917 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
SMG8-201ENST00000300917 SOX12O15370 315 aa19.04■□□□□ 0.64
SMG8-201ENST00000300917 NME9Q86XW9 330 aa19.03■□□□□ 0.64
SMG8-201ENST00000300917 PUS7Q96PZ0 661 aaKnown RBP19.03■□□□□ 0.64
SMG8-201ENST00000300917 E9PSI1 815 aa19.03■□□□□ 0.64
SMG8-201ENST00000300917 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
SMG8-201ENST00000300917 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
SMG8-201ENST00000300917 ABCC11Q96J66 1382 aa19.02■□□□□ 0.64
SMG8-201ENST00000300917 NUDT16Q96DE0 195 aaKnown RBP19.01■□□□□ 0.63
SMG8-201ENST00000300917 REREQ9P2R6 1566 aa19.01■□□□□ 0.63
SMG8-201ENST00000300917 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
SMG8-201ENST00000300917 CD163L1Q9NR16 1453 aa18.99■□□□□ 0.63
SMG8-201ENST00000300917 HMOX1P09601 288 aa18.99■□□□□ 0.63
SMG8-201ENST00000300917 TSR2Q969E8 191 aaKnown RBP18.99■□□□□ 0.63
SMG8-201ENST00000300917 EMILIN1Q9Y6C2 1016 aa18.99■□□□□ 0.63
SMG8-201ENST00000300917 TMEM2Q9UHN6 1383 aa18.99■□□□□ 0.63
SMG8-201ENST00000300917 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
SMG8-201ENST00000300917 TRMT2AQ8IZ69 625 aaKnown RBP18.97■□□□□ 0.63
SMG8-201ENST00000300917 DIAPH1O60610 1272 aaKnown RBP18.96■□□□□ 0.63
SMG8-201ENST00000300917 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
SMG8-201ENST00000300917 PANK1Q8TE04 598 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 NSD2O96028 1365 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 MSH5O43196 834 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 CLUAP1Q96AJ1 413 aa18.96■□□□□ 0.63
SMG8-201ENST00000300917 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
SMG8-201ENST00000300917 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
SMG8-201ENST00000300917 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
SMG8-201ENST00000300917 RBM33Q96EV2 1170 aaKnown RBP18.95■□□□□ 0.62
SMG8-201ENST00000300917 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
SMG8-201ENST00000300917 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
SMG8-201ENST00000300917 CCDC61Q9Y6R9 512 aa18.94■□□□□ 0.62
SMG8-201ENST00000300917 PMFBP1Q8TBY8 1022 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms