RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
TTC17-202ENST00000299240 SYNMO15061 1565 aa16.68■□□□□ 0.26
TTC17-202ENST00000299240 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
TTC17-202ENST00000299240 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
TTC17-202ENST00000299240 GLI2P10070 1586 aa16.67■□□□□ 0.26
TTC17-202ENST00000299240 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
TTC17-202ENST00000299240 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
TTC17-202ENST00000299240 KIF1BO60333 1816 aa16.67■□□□□ 0.26
TTC17-202ENST00000299240 CAMSAP1Q5T5Y3 1602 aa16.66■□□□□ 0.26
TTC17-202ENST00000299240 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
TTC17-202ENST00000299240 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
TTC17-202ENST00000299240 DEPDC5O75140 1603 aa16.66■□□□□ 0.26
TTC17-202ENST00000299240 SIGLEC1Q9BZZ2 1709 aa16.66■□□□□ 0.26
TTC17-202ENST00000299240 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
TTC17-202ENST00000299240 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
TTC17-202ENST00000299240 FYB1O15117 783 aa16.64■□□□□ 0.25
TTC17-202ENST00000299240 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
TTC17-202ENST00000299240 ANKLE2Q86XL3 938 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
TTC17-202ENST00000299240 TCERG1O14776 1098 aaKnown RBP16.63■□□□□ 0.25
TTC17-202ENST00000299240 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
TTC17-202ENST00000299240 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
TTC17-202ENST00000299240 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
TTC17-202ENST00000299240 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
TTC17-202ENST00000299240 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
TTC17-202ENST00000299240 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
TTC17-202ENST00000299240 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
TTC17-202ENST00000299240 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
TTC17-202ENST00000299240 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
TTC17-202ENST00000299240 THUMPD2Q9BTF0 503 aaKnown RBP16.6■□□□□ 0.25
TTC17-202ENST00000299240 LMTK2Q8IWU2 1503 aa16.6■□□□□ 0.25
TTC17-202ENST00000299240 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
TTC17-202ENST00000299240 ARHGAP31Q2M1Z3 1444 aa16.59■□□□□ 0.25
TTC17-202ENST00000299240 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
TTC17-202ENST00000299240 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
TTC17-202ENST00000299240 FOXO3O43524 673 aa16.59■□□□□ 0.25
TTC17-202ENST00000299240 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
TTC17-202ENST00000299240 PELP1Q8IZL8 1130 aaKnown RBP16.58■□□□□ 0.25
TTC17-202ENST00000299240 TCP11L2Q8N4U5 519 aa16.58■□□□□ 0.25
TTC17-202ENST00000299240 COG3Q96JB2 828 aa16.58■□□□□ 0.25
TTC17-202ENST00000299240 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
TTC17-202ENST00000299240 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
TTC17-202ENST00000299240 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
TTC17-202ENST00000299240 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
TTC17-202ENST00000299240 ACEP12821 1306 aa16.57■□□□□ 0.24
TTC17-202ENST00000299240 MYOM2P54296 1465 aa16.57■□□□□ 0.24
TTC17-202ENST00000299240 NLRP6P59044 892 aa16.57■□□□□ 0.24
TTC17-202ENST00000299240 MAPK8IP3Q9UPT6 1336 aa16.56■□□□□ 0.24
TTC17-202ENST00000299240 PRR36Q9H6K5 1346 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 NEFMP07197 916 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 TSR2Q969E8 191 aaKnown RBP16.55■□□□□ 0.24
TTC17-202ENST00000299240 NEXMIFQ5QGS0 1516 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 MYO5BQ9ULV0 1848 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 EXOC6Q8TAG9 804 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
TTC17-202ENST00000299240 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
TTC17-202ENST00000299240 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
TTC17-202ENST00000299240 PSME1Q06323 249 aa16.52■□□□□ 0.24
TTC17-202ENST00000299240 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
TTC17-202ENST00000299240 ARHGEF40Q8TER5 1519 aa16.52■□□□□ 0.24
TTC17-202ENST00000299240 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
TTC17-202ENST00000299240 ZMYM4Q5VZL5 1548 aa16.52■□□□□ 0.23
TTC17-202ENST00000299240 BCAR3O75815 825 aa16.52■□□□□ 0.23
TTC17-202ENST00000299240 ORAI2Q96SN7 254 aa16.52■□□□□ 0.23
TTC17-202ENST00000299240 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.23
TTC17-202ENST00000299240 PPIP5K1Q6PFW1 1433 aa16.52■□□□□ 0.23
TTC17-202ENST00000299240 AMPHP49418 695 aa16.51■□□□□ 0.23
TTC17-202ENST00000299240 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
TTC17-202ENST00000299240 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
TTC17-202ENST00000299240 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
TTC17-202ENST00000299240 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
TTC17-202ENST00000299240 HSP90AB2PQ58FF8 381 aa16.5■□□□□ 0.23
TTC17-202ENST00000299240 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
TTC17-202ENST00000299240 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
TTC17-202ENST00000299240 RIPK4P57078 832 aa16.49■□□□□ 0.23
TTC17-202ENST00000299240 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
TTC17-202ENST00000299240 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
TTC17-202ENST00000299240 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
TTC17-202ENST00000299240 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
TTC17-202ENST00000299240 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
TTC17-202ENST00000299240 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.23
TTC17-202ENST00000299240 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.23
TTC17-202ENST00000299240 PTPRMP28827 1452 aa16.46■□□□□ 0.23
TTC17-202ENST00000299240 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
TTC17-202ENST00000299240 CABLES1Q8TDN4 633 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
TTC17-202ENST00000299240 ABCC11Q96J66 1382 aa16.44■□□□□ 0.22
TTC17-202ENST00000299240 TBX22Q9Y458 520 aa16.44■□□□□ 0.22
TTC17-202ENST00000299240 AGLP35573 1532 aa16.44■□□□□ 0.22
TTC17-202ENST00000299240 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms