RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MROH2AA6NES4 1674 aa13.15□□□□□ -0.3
FOXN4-201ENST00000299162 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
FOXN4-201ENST00000299162 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
FOXN4-201ENST00000299162 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
FOXN4-201ENST00000299162 KIF1BO60333 1816 aa13.14□□□□□ -0.31
FOXN4-201ENST00000299162 FRMPD1Q5SYB0 1578 aa13.14□□□□□ -0.31
FOXN4-201ENST00000299162 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 TSPOAP1O95153 1857 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 VWDEQ8N2E2 1590 aa13.13□□□□□ -0.31
FOXN4-201ENST00000299162 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
FOXN4-201ENST00000299162 SOX12O15370 315 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 SLC4A3P48751 1232 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 ARXQ96QS3 562 aa13.12□□□□□ -0.31
FOXN4-201ENST00000299162 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
FOXN4-201ENST00000299162 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
FOXN4-201ENST00000299162 ABCC3O15438 1527 aa13.11□□□□□ -0.31
FOXN4-201ENST00000299162 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
FOXN4-201ENST00000299162 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
FOXN4-201ENST00000299162 PIK3C2GO75747 1445 aa13.1□□□□□ -0.31
FOXN4-201ENST00000299162 LAMC1P11047 1609 aa13.1□□□□□ -0.31
FOXN4-201ENST00000299162 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
FOXN4-201ENST00000299162 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
FOXN4-201ENST00000299162 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
FOXN4-201ENST00000299162 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 MYOM2P54296 1465 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
FOXN4-201ENST00000299162 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.32
FOXN4-201ENST00000299162 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
FOXN4-201ENST00000299162 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
FOXN4-201ENST00000299162 SYNMO15061 1565 aa13.08□□□□□ -0.32
FOXN4-201ENST00000299162 PDE4AP27815 886 aa13.07□□□□□ -0.32
FOXN4-201ENST00000299162 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
FOXN4-201ENST00000299162 E9PSI1 815 aa13.06□□□□□ -0.32
FOXN4-201ENST00000299162 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
FOXN4-201ENST00000299162 ZMYM4Q5VZL5 1548 aa13.06□□□□□ -0.32
FOXN4-201ENST00000299162 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
FOXN4-201ENST00000299162 NEO1Q92859 1461 aa13.05□□□□□ -0.32
FOXN4-201ENST00000299162 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
FOXN4-201ENST00000299162 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
FOXN4-201ENST00000299162 HMOX1P09601 288 aa13.04□□□□□ -0.32
FOXN4-201ENST00000299162 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
FOXN4-201ENST00000299162 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
FOXN4-201ENST00000299162 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
FOXN4-201ENST00000299162 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
FOXN4-201ENST00000299162 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
FOXN4-201ENST00000299162 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
FOXN4-201ENST00000299162 MYOM1P52179 1685 aa13.03□□□□□ -0.32
FOXN4-201ENST00000299162 FYB1O15117 783 aa13.03□□□□□ -0.32
FOXN4-201ENST00000299162 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
FOXN4-201ENST00000299162 SIGLEC1Q9BZZ2 1709 aa13.03□□□□□ -0.32
FOXN4-201ENST00000299162 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
FOXN4-201ENST00000299162 LMTK2Q8IWU2 1503 aa13.02□□□□□ -0.33
FOXN4-201ENST00000299162 ELL2O00472 640 aaPredicted RBP13.01□□□□□ -0.33
FOXN4-201ENST00000299162 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
FOXN4-201ENST00000299162 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
FOXN4-201ENST00000299162 CAMSAP1Q5T5Y3 1602 aa13□□□□□ -0.33
FOXN4-201ENST00000299162 ADGRB1O14514 1584 aa13□□□□□ -0.33
FOXN4-201ENST00000299162 CFAP74Q9C0B2 1584 aa13□□□□□ -0.33
FOXN4-201ENST00000299162 NPC1L1Q9UHC9 1359 aa13□□□□□ -0.33
FOXN4-201ENST00000299162 NRXN1Q9ULB1 1477 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
FOXN4-201ENST00000299162 RRS1Q15050 365 aaKnown RBP12.99□□□□□ -0.33
FOXN4-201ENST00000299162 NME9Q86XW9 330 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 GLI2P10070 1586 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
FOXN4-201ENST00000299162 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
FOXN4-201ENST00000299162 IGHDP01880 384 aa12.98□□□□□ -0.33
FOXN4-201ENST00000299162 RIPK4P57078 832 aa12.98□□□□□ -0.33
FOXN4-201ENST00000299162 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
FOXN4-201ENST00000299162 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
FOXN4-201ENST00000299162 NKTRP30414 1462 aaKnown RBP12.98□□□□□ -0.33
FOXN4-201ENST00000299162 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
FOXN4-201ENST00000299162 RLBP1P12271 317 aa12.98□□□□□ -0.33
FOXN4-201ENST00000299162 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
FOXN4-201ENST00000299162 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
FOXN4-201ENST00000299162 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
FOXN4-201ENST00000299162 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
FOXN4-201ENST00000299162 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
FOXN4-201ENST00000299162 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
FOXN4-201ENST00000299162 PPLO60437 1756 aa12.97□□□□□ -0.33
FOXN4-201ENST00000299162 SMC4Q9NTJ3 1288 aa12.97□□□□□ -0.33
FOXN4-201ENST00000299162 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.34
FOXN4-201ENST00000299162 CENPQQ7L2Z9 268 aaPredicted RBP12.96□□□□□ -0.34
FOXN4-201ENST00000299162 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
FOXN4-201ENST00000299162 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
FOXN4-201ENST00000299162 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
FOXN4-201ENST00000299162 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms