RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 KIDINS220Q9ULH0 1771 aa17.54■□□□□ 0.4
TTC39B-201ENST00000297615 CEP152O94986 1710 aa17.54■□□□□ 0.4
TTC39B-201ENST00000297615 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
TTC39B-201ENST00000297615 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
TTC39B-201ENST00000297615 DAXXQ9UER7 740 aaPredicted RBP17.53■□□□□ 0.4
TTC39B-201ENST00000297615 IGHDP01880 384 aa17.53■□□□□ 0.4
TTC39B-201ENST00000297615 NEFMP07197 916 aa17.53■□□□□ 0.4
TTC39B-201ENST00000297615 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.39
TTC39B-201ENST00000297615 SPHKAPQ2M3C7 1700 aa17.51■□□□□ 0.39
TTC39B-201ENST00000297615 NUTM2GQ5VZR2 741 aa17.51■□□□□ 0.39
TTC39B-201ENST00000297615 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
TTC39B-201ENST00000297615 RLBP1P12271 317 aa17.51■□□□□ 0.39
TTC39B-201ENST00000297615 FYB1O15117 783 aa17.51■□□□□ 0.39
TTC39B-201ENST00000297615 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.51■□□□□ 0.39
TTC39B-201ENST00000297615 PPRC1Q5VV67 1664 aaKnown RBP17.5■□□□□ 0.39
TTC39B-201ENST00000297615 BLMP54132 1417 aaPredicted RBP17.5■□□□□ 0.39
TTC39B-201ENST00000297615 NME9Q86XW9 330 aa17.5■□□□□ 0.39
TTC39B-201ENST00000297615 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
TTC39B-201ENST00000297615 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
TTC39B-201ENST00000297615 ABCA9Q8IUA7 1624 aa17.49■□□□□ 0.39
TTC39B-201ENST00000297615 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
TTC39B-201ENST00000297615 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
TTC39B-201ENST00000297615 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
TTC39B-201ENST00000297615 E9PSI1 815 aa17.47■□□□□ 0.39
TTC39B-201ENST00000297615 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
TTC39B-201ENST00000297615 RIPK4P57078 832 aa17.47■□□□□ 0.39
TTC39B-201ENST00000297615 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
TTC39B-201ENST00000297615 ABCA6Q8N139 1617 aa17.46■□□□□ 0.39
TTC39B-201ENST00000297615 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
TTC39B-201ENST00000297615 MROH1Q8NDA8 1641 aa17.46■□□□□ 0.39
TTC39B-201ENST00000297615 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.39
TTC39B-201ENST00000297615 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
TTC39B-201ENST00000297615 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.38
TTC39B-201ENST00000297615 STAC3Q96MF2 364 aa17.46■□□□□ 0.38
TTC39B-201ENST00000297615 SLC52A1Q9NWF4 448 aa17.46■□□□□ 0.38
TTC39B-201ENST00000297615 A0A1W2PP64 1363 aa17.46■□□□□ 0.38
TTC39B-201ENST00000297615 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
TTC39B-201ENST00000297615 TET3O43151 1660 aa17.45■□□□□ 0.38
TTC39B-201ENST00000297615 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
TTC39B-201ENST00000297615 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
TTC39B-201ENST00000297615 EFCAB6Q5THR3 1501 aa17.44■□□□□ 0.38
TTC39B-201ENST00000297615 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
TTC39B-201ENST00000297615 ZNF521Q96K83 1311 aa17.44■□□□□ 0.38
TTC39B-201ENST00000297615 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
TTC39B-201ENST00000297615 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
TTC39B-201ENST00000297615 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
TTC39B-201ENST00000297615 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
TTC39B-201ENST00000297615 FRMPD1Q5SYB0 1578 aa17.42■□□□□ 0.38
TTC39B-201ENST00000297615 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
TTC39B-201ENST00000297615 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
TTC39B-201ENST00000297615 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
TTC39B-201ENST00000297615 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
TTC39B-201ENST00000297615 MS4A1P11836 297 aa17.41■□□□□ 0.38
TTC39B-201ENST00000297615 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
TTC39B-201ENST00000297615 MAP3K4Q9Y6R4 1608 aa17.41■□□□□ 0.38
TTC39B-201ENST00000297615 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
TTC39B-201ENST00000297615 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
TTC39B-201ENST00000297615 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
TTC39B-201ENST00000297615 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
TTC39B-201ENST00000297615 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.38
TTC39B-201ENST00000297615 ABCC3O15438 1527 aa17.39■□□□□ 0.37
TTC39B-201ENST00000297615 KIF1BO60333 1816 aa17.39■□□□□ 0.37
TTC39B-201ENST00000297615 TMPOP42166 694 aaKnown RBP17.38■□□□□ 0.37
TTC39B-201ENST00000297615 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
TTC39B-201ENST00000297615 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
TTC39B-201ENST00000297615 SEC24BO95487 1268 aa17.38■□□□□ 0.37
TTC39B-201ENST00000297615 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
TTC39B-201ENST00000297615 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
TTC39B-201ENST00000297615 APBB1O00213 710 aa17.37■□□□□ 0.37
TTC39B-201ENST00000297615 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
TTC39B-201ENST00000297615 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
TTC39B-201ENST00000297615 KDM2BQ8NHM5 1336 aa17.36■□□□□ 0.37
TTC39B-201ENST00000297615 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
TTC39B-201ENST00000297615 SSH1Q8WYL5 1049 aa17.35■□□□□ 0.37
TTC39B-201ENST00000297615 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
TTC39B-201ENST00000297615 ARXQ96QS3 562 aa17.35■□□□□ 0.37
TTC39B-201ENST00000297615 IQGAP1P46940 1657 aa17.35■□□□□ 0.37
TTC39B-201ENST00000297615 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
TTC39B-201ENST00000297615 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
TTC39B-201ENST00000297615 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
TTC39B-201ENST00000297615 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
TTC39B-201ENST00000297615 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
TTC39B-201ENST00000297615 METP08581 1390 aa17.34■□□□□ 0.37
TTC39B-201ENST00000297615 TSPYL6Q8N831 410 aa17.33■□□□□ 0.37
TTC39B-201ENST00000297615 NKTRP30414 1462 aaKnown RBP17.33■□□□□ 0.36
TTC39B-201ENST00000297615 C8orf34Q49A92 452 aa17.33■□□□□ 0.36
TTC39B-201ENST00000297615 KDM5AP29375 1690 aaKnown RBP17.33■□□□□ 0.36
TTC39B-201ENST00000297615 VWDEQ8N2E2 1590 aa17.33■□□□□ 0.36
TTC39B-201ENST00000297615 LAMC1P11047 1609 aa17.32■□□□□ 0.36
TTC39B-201ENST00000297615 LTKP29376 864 aa17.32■□□□□ 0.36
TTC39B-201ENST00000297615 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
TTC39B-201ENST00000297615 ARAP3Q8WWN8 1544 aa17.32■□□□□ 0.36
TTC39B-201ENST00000297615 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
TTC39B-201ENST00000297615 TRMT2AQ8IZ69 625 aaKnown RBP17.32■□□□□ 0.36
TTC39B-201ENST00000297615 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
TTC39B-201ENST00000297615 DEPDC5O75140 1603 aa17.31■□□□□ 0.36
TTC39B-201ENST00000297615 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
TTC39B-201ENST00000297615 SYNMO15061 1565 aa17.31■□□□□ 0.36
TTC39B-201ENST00000297615 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
TTC39B-201ENST00000297615 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms