RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 PRAM1Q96QH2 718 aa33.7■■■□□ 2.99
GBX1-201ENST00000297537 BRINP3Q76B58 766 aa33.67■■■□□ 2.98
GBX1-201ENST00000297537 CDC42BPGQ6DT37 1551 aa33.65■■■□□ 2.98
GBX1-201ENST00000297537 C1orf167Q5SNV9 1468 aa33.65■■■□□ 2.98
GBX1-201ENST00000297537 TONSLQ96HA7 1378 aa33.64■■■□□ 2.98
GBX1-201ENST00000297537 CLSPNQ9HAW4 1339 aa33.64■■■□□ 2.98
GBX1-201ENST00000297537 POGKQ9P215 609 aa33.63■■■□□ 2.97
GBX1-201ENST00000297537 NBPF8Q3BBV2 869 aa33.61■■■□□ 2.97
GBX1-201ENST00000297537 SAFB2Q14151 953 aaKnown RBP eCLIP33.6■■■□□ 2.97
GBX1-201ENST00000297537 TRPM1Q7Z4N2 1603 aa33.56■■■□□ 2.96
GBX1-201ENST00000297537 AHDC1Q5TGY3 1603 aaPredicted RBP33.55■■■□□ 2.96
GBX1-201ENST00000297537 ORAI2Q96SN7 254 aa33.55■■■□□ 2.96
GBX1-201ENST00000297537 ARHGEF28Q8N1W1 1705 aaKnown RBP33.55■■■□□ 2.96
GBX1-201ENST00000297537 PHLPP1O60346 1717 aa33.51■■■□□ 2.96
GBX1-201ENST00000297537 ADGRB2O60241 1585 aa33.51■■■□□ 2.95
GBX1-201ENST00000297537 FMN2Q9NZ56 1722 aa33.5■■■□□ 2.95
GBX1-201ENST00000297537 COL16A1Q07092 1604 aaPredicted RBP33.49■■■□□ 2.95
GBX1-201ENST00000297537 MINK1Q8N4C8 1332 aaPredicted RBP33.49■■■□□ 2.95
GBX1-201ENST00000297537 ROCK2O75116 1388 aaKnown RBP33.48■■■□□ 2.95
GBX1-201ENST00000297537 GPRASP1Q5JY77 1395 aa33.48■■■□□ 2.95
GBX1-201ENST00000297537 NUTM2FA1L443 756 aa33.48■■■□□ 2.95
GBX1-201ENST00000297537 HIRIP3Q9BW71 556 aaPredicted RBP33.48■■■□□ 2.95
GBX1-201ENST00000297537 NHSL1Q5SYE7 1610 aa33.46■■■□□ 2.95
GBX1-201ENST00000297537 ESCO1Q5FWF5 840 aa33.46■■■□□ 2.95
GBX1-201ENST00000297537 DDX17Q92841 729 aaKnown RBP33.46■■■□□ 2.95
GBX1-201ENST00000297537 TIMELESSQ9UNS1 1208 aa33.46■■■□□ 2.95
GBX1-201ENST00000297537 CCER1Q8TC90 406 aaPredicted RBP33.45■■■□□ 2.95
GBX1-201ENST00000297537 WASLO00401 505 aaPredicted RBP33.44■■■□□ 2.94
GBX1-201ENST00000297537 RALGAPBQ86X10 1494 aa33.41■■■□□ 2.94
GBX1-201ENST00000297537 JCADQ9P266 1359 aa33.4■■■□□ 2.94
GBX1-201ENST00000297537 CENPJQ9HC77 1338 aaPredicted RBP33.4■■■□□ 2.94
GBX1-201ENST00000297537 ANKARQ7Z5J8 1434 aa33.39■■■□□ 2.94
GBX1-201ENST00000297537 SOS2Q07890 1332 aaPredicted RBP33.39■■■□□ 2.94
GBX1-201ENST00000297537 USP32Q8NFA0 1604 aa33.36■■■□□ 2.93
GBX1-201ENST00000297537 LRRC59Q96AG4 307 aaKnown RBP33.36■■■□□ 2.93
GBX1-201ENST00000297537 NPHP3Q7Z494 1330 aa33.35■■■□□ 2.93
GBX1-201ENST00000297537 PRR36Q9H6K5 1346 aa33.35■■■□□ 2.93
GBX1-201ENST00000297537 FOXO3O43524 673 aa33.35■■■□□ 2.93
GBX1-201ENST00000297537 CARD11Q9BXL7 1154 aa33.35■■■□□ 2.93
GBX1-201ENST00000297537 EIF3AQ14152 1382 aaKnown RBP33.34■■■□□ 2.93
GBX1-201ENST00000297537 TULP4Q9NRJ4 1543 aa33.34■■■□□ 2.93
GBX1-201ENST00000297537 RGPD8O14715 1765 aaPredicted RBP33.34■■■□□ 2.93
GBX1-201ENST00000297537 CDK19Q9BWU1 502 aa33.33■■■□□ 2.93
GBX1-201ENST00000297537 PHF8Q9UPP1 1060 aa33.33■■■□□ 2.93
GBX1-201ENST00000297537 MED1Q15648 1581 aaPredicted RBP33.31■■■□□ 2.92
GBX1-201ENST00000297537 KIF1AQ12756 1690 aa33.29■■■□□ 2.92
GBX1-201ENST00000297537 PXDNQ92626 1479 aa33.29■■■□□ 2.92
GBX1-201ENST00000297537 SHPRHQ149N8 1683 aa33.27■■■□□ 2.92
GBX1-201ENST00000297537 NUDT16Q96DE0 195 aaKnown RBP33.27■■■□□ 2.92
GBX1-201ENST00000297537 SPATA31A6Q5VVP1 1343 aa33.27■■■□□ 2.92
GBX1-201ENST00000297537 QRICH2Q9H0J4 1663 aa33.26■■■□□ 2.92
GBX1-201ENST00000297537 ATP7BP35670 1465 aa33.25■■■□□ 2.91
GBX1-201ENST00000297537 DISP3Q9P2K9 1392 aa33.24■■■□□ 2.91
GBX1-201ENST00000297537 PMFBP1Q8TBY8 1022 aa33.24■■■□□ 2.91
GBX1-201ENST00000297537 PNPLA6Q8IY17 1366 aa33.23■■■□□ 2.91
GBX1-201ENST00000297537 XPCQ01831 940 aaPredicted RBP33.23■■■□□ 2.91
GBX1-201ENST00000297537 KRT28Q7Z3Y7 464 aa33.22■■■□□ 2.91
GBX1-201ENST00000297537 CCDC61Q9Y6R9 512 aa33.2■■■□□ 2.91
GBX1-201ENST00000297537 SBNO2Q9Y2G9 1366 aa33.2■■■□□ 2.9
GBX1-201ENST00000297537 CABP2Q9NPB3 220 aa33.18■■■□□ 2.9
GBX1-201ENST00000297537 SRPK2P78362 688 aaKnown RBP33.17■■■□□ 2.9
GBX1-201ENST00000297537 EVC2Q86UK5 1308 aa33.17■■■□□ 2.9
GBX1-201ENST00000297537 PSME1Q06323 249 aa33.16■■■□□ 2.9
GBX1-201ENST00000297537 SPATA31A3Q5VYP0 1347 aa33.16■■■□□ 2.9
GBX1-201ENST00000297537 LRP6O75581 1613 aa33.16■■■□□ 2.9
GBX1-201ENST00000297537 PLEKHG3A1L390 1219 aa33.15■■■□□ 2.9
GBX1-201ENST00000297537 ITSN1Q15811 1721 aa33.13■■■□□ 2.89
GBX1-201ENST00000297537 TOPAZ1Q8N9V7 1692 aa33.13■■■□□ 2.89
GBX1-201ENST00000297537 SBNO1A3KN83 1393 aa33.12■■■□□ 2.89
GBX1-201ENST00000297537 NGDNQ8NEJ9 315 aaKnown RBP33.11■■■□□ 2.89
GBX1-201ENST00000297537 POLR3AO14802 1390 aaPredicted RBP33.1■■■□□ 2.89
GBX1-201ENST00000297537 COL22A1Q8NFW1 1626 aaPredicted RBP33.1■■■□□ 2.89
GBX1-201ENST00000297537 ST20-MTHFSA0A0A6YYL1 179 aa33.09■■■□□ 2.89
GBX1-201ENST00000297537 RGS17Q9UGC6 210 aaPredicted RBP33.09■■■□□ 2.89
GBX1-201ENST00000297537 NUTM2BA6NNL0 878 aaPredicted RBP33.08■■■□□ 2.89
GBX1-201ENST00000297537 NUTM2EB1AL46 878 aaPredicted RBP33.08■■■□□ 2.89
GBX1-201ENST00000297537 NUTM2AQ8IVF1 878 aaPredicted RBP33.08■■■□□ 2.89
GBX1-201ENST00000297537 TESK2Q96S53 571 aa33.08■■■□□ 2.89
GBX1-201ENST00000297537 PHF23Q9BUL5 403 aaPredicted RBP33.07■■■□□ 2.88
GBX1-201ENST00000297537 TNS3Q68CZ2 1445 aa33.07■■■□□ 2.88
GBX1-201ENST00000297537 ACEP12821 1306 aa33.06■■■□□ 2.88
GBX1-201ENST00000297537 PPIP5K1Q6PFW1 1433 aa33.06■■■□□ 2.88
GBX1-201ENST00000297537 CABP1Q9NZU7 370 aa33.04■■■□□ 2.88
GBX1-201ENST00000297537 TRPM3Q9HCF6 1732 aaPredicted RBP33.04■■■□□ 2.88
GBX1-201ENST00000297537 USP47Q96K76 1375 aa33.04■■■□□ 2.88
GBX1-201ENST00000297537 SLC24A1O60721 1099 aa33■■■□□ 2.87
GBX1-201ENST00000297537 MEX3CQ5U5Q3 659 aaKnown RBP33■■■□□ 2.87
GBX1-201ENST00000297537 ARHGEF10O15013 1369 aa32.99■■■□□ 2.87
GBX1-201ENST00000297537 ATAD2Q6PL18 1390 aa32.99■■■□□ 2.87
GBX1-201ENST00000297537 PUS7Q96PZ0 661 aaKnown RBP32.99■■■□□ 2.87
GBX1-201ENST00000297537 ILDR2Q71H61 639 aa32.96■■■□□ 2.87
GBX1-201ENST00000297537 ALS2Q96Q42 1657 aa32.96■■■□□ 2.87
GBX1-201ENST00000297537 ADAMTS2O95450 1211 aa32.94■■■□□ 2.86
GBX1-201ENST00000297537 LMOD2Q6P5Q4 547 aa32.94■■■□□ 2.86
GBX1-201ENST00000297537 PAK3O75914 559 aaPredicted RBP32.93■■■□□ 2.86
GBX1-201ENST00000297537 BRD4O60885 1362 aaPredicted RBP32.91■■■□□ 2.86
GBX1-201ENST00000297537 CABLES1Q8TDN4 633 aa32.9■■■□□ 2.86
GBX1-201ENST00000297537 C8orf37Q96NL8 207 aa32.9■■■□□ 2.86
GBX1-201ENST00000297537 POTEAQ6S8J7 498 aa32.89■■■□□ 2.86
GBX1-201ENST00000297537 ZNF692Q9BU19 519 aaPredicted RBP32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms