RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 MED1Q15648 1581 aaPredicted RBP17.34■□□□□ 0.37
CDK5-201ENST00000297518 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
CDK5-201ENST00000297518 DISP3Q9P2K9 1392 aa17.33■□□□□ 0.36
CDK5-201ENST00000297518 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
CDK5-201ENST00000297518 NEUROD1Q13562 356 aa17.32■□□□□ 0.36
CDK5-201ENST00000297518 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
CDK5-201ENST00000297518 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
CDK5-201ENST00000297518 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
CDK5-201ENST00000297518 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
CDK5-201ENST00000297518 POGKQ9P215 609 aa17.29■□□□□ 0.36
CDK5-201ENST00000297518 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
CDK5-201ENST00000297518 JCADQ9P266 1359 aa17.28■□□□□ 0.36
CDK5-201ENST00000297518 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDK5-201ENST00000297518 ADGRB2O60241 1585 aa17.27■□□□□ 0.35
CDK5-201ENST00000297518 ORAI2Q96SN7 254 aa17.26■□□□□ 0.35
CDK5-201ENST00000297518 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
CDK5-201ENST00000297518 NBPF1Q3BBV0 1214 aa17.24■□□□□ 0.35
CDK5-201ENST00000297518 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
CDK5-201ENST00000297518 TRPM1Q7Z4N2 1603 aa17.24■□□□□ 0.35
CDK5-201ENST00000297518 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
CDK5-201ENST00000297518 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
CDK5-201ENST00000297518 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
CDK5-201ENST00000297518 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
CDK5-201ENST00000297518 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
CDK5-201ENST00000297518 MINK1Q8N4C8 1332 aaPredicted RBP17.21■□□□□ 0.34
CDK5-201ENST00000297518 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
CDK5-201ENST00000297518 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
CDK5-201ENST00000297518 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
CDK5-201ENST00000297518 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
CDK5-201ENST00000297518 NPHP3Q7Z494 1330 aa17.2■□□□□ 0.34
CDK5-201ENST00000297518 USP32Q8NFA0 1604 aa17.19■□□□□ 0.34
CDK5-201ENST00000297518 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
CDK5-201ENST00000297518 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
CDK5-201ENST00000297518 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
CDK5-201ENST00000297518 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
CDK5-201ENST00000297518 PXDNQ92626 1479 aa17.18■□□□□ 0.34
CDK5-201ENST00000297518 TULP4Q9NRJ4 1543 aa17.17■□□□□ 0.34
CDK5-201ENST00000297518 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
CDK5-201ENST00000297518 PNPLA6Q8IY17 1366 aa17.16■□□□□ 0.34
CDK5-201ENST00000297518 WASLO00401 505 aaPredicted RBP17.16■□□□□ 0.34
CDK5-201ENST00000297518 FOXO3O43524 673 aa17.16■□□□□ 0.34
CDK5-201ENST00000297518 LRP6O75581 1613 aa17.16■□□□□ 0.34
CDK5-201ENST00000297518 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
CDK5-201ENST00000297518 QRICH2Q9H0J4 1663 aa17.15■□□□□ 0.34
CDK5-201ENST00000297518 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
CDK5-201ENST00000297518 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.33
CDK5-201ENST00000297518 ILDR2Q71H61 639 aa17.13■□□□□ 0.33
CDK5-201ENST00000297518 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
CDK5-201ENST00000297518 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
CDK5-201ENST00000297518 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
CDK5-201ENST00000297518 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
CDK5-201ENST00000297518 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
CDK5-201ENST00000297518 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
CDK5-201ENST00000297518 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
CDK5-201ENST00000297518 ATP7BP35670 1465 aa17.12■□□□□ 0.33
CDK5-201ENST00000297518 NUTM2BA6NNL0 878 aaPredicted RBP17.11■□□□□ 0.33
CDK5-201ENST00000297518 NUTM2EB1AL46 878 aaPredicted RBP17.11■□□□□ 0.33
CDK5-201ENST00000297518 NUTM2AQ8IVF1 878 aaPredicted RBP17.11■□□□□ 0.33
CDK5-201ENST00000297518 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
CDK5-201ENST00000297518 CDK19Q9BWU1 502 aa17.1■□□□□ 0.33
CDK5-201ENST00000297518 KRT28Q7Z3Y7 464 aa17.09■□□□□ 0.33
CDK5-201ENST00000297518 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
CDK5-201ENST00000297518 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
CDK5-201ENST00000297518 TOPAZ1Q8N9V7 1692 aa17.09■□□□□ 0.33
CDK5-201ENST00000297518 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
CDK5-201ENST00000297518 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CDK5-201ENST00000297518 PSME1Q06323 249 aa17.07■□□□□ 0.32
CDK5-201ENST00000297518 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
CDK5-201ENST00000297518 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
CDK5-201ENST00000297518 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
CDK5-201ENST00000297518 TRPM3Q9HCF6 1732 aaPredicted RBP17.05■□□□□ 0.32
CDK5-201ENST00000297518 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
CDK5-201ENST00000297518 NGDNQ8NEJ9 315 aaKnown RBP17.03■□□□□ 0.32
CDK5-201ENST00000297518 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
CDK5-201ENST00000297518 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
CDK5-201ENST00000297518 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
CDK5-201ENST00000297518 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
CDK5-201ENST00000297518 EVC2Q86UK5 1308 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 ADAMTS2O95450 1211 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
CDK5-201ENST00000297518 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
CDK5-201ENST00000297518 SBNO2Q9Y2G9 1366 aa17.01■□□□□ 0.31
CDK5-201ENST00000297518 AFF2P51816 1311 aa17■□□□□ 0.31
CDK5-201ENST00000297518 ZNF772Q68DY9 489 aaPredicted RBP17■□□□□ 0.31
CDK5-201ENST00000297518 PPIP5K1Q6PFW1 1433 aa17■□□□□ 0.31
CDK5-201ENST00000297518 C8orf37Q96NL8 207 aa17■□□□□ 0.31
CDK5-201ENST00000297518 ABCA3Q99758 1704 aa16.99■□□□□ 0.31
CDK5-201ENST00000297518 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
CDK5-201ENST00000297518 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
CDK5-201ENST00000297518 ACEP12821 1306 aa16.98■□□□□ 0.31
CDK5-201ENST00000297518 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
CDK5-201ENST00000297518 SOCS7O14512 581 aa16.95■□□□□ 0.3
CDK5-201ENST00000297518 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
CDK5-201ENST00000297518 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
CDK5-201ENST00000297518 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
CDK5-201ENST00000297518 CABP1Q9NZU7 370 aa16.94■□□□□ 0.3
CDK5-201ENST00000297518 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms