RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 HSCBQ8IWL3 235 aa18.83■□□□□ 0.61
SPIDR-201ENST00000297423 DEPDC5O75140 1603 aa18.83■□□□□ 0.6
SPIDR-201ENST00000297423 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.6
SPIDR-201ENST00000297423 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
SPIDR-201ENST00000297423 NPATQ14207 1427 aa18.82■□□□□ 0.6
SPIDR-201ENST00000297423 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
SPIDR-201ENST00000297423 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
SPIDR-201ENST00000297423 SLC52A1Q9NWF4 448 aa18.81■□□□□ 0.6
SPIDR-201ENST00000297423 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SPIDR-201ENST00000297423 PLPPR3Q6T4P5 718 aa18.8■□□□□ 0.6
SPIDR-201ENST00000297423 MCM4P33991 863 aa18.8■□□□□ 0.6
SPIDR-201ENST00000297423 SPHKAPQ2M3C7 1700 aa18.8■□□□□ 0.6
SPIDR-201ENST00000297423 CFAP65Q6ZU64 1925 aaKnown RBP18.8■□□□□ 0.6
SPIDR-201ENST00000297423 DIP2CQ9Y2E4 1556 aa18.8■□□□□ 0.6
SPIDR-201ENST00000297423 TBC1D2Q9BYX2 928 aa18.8■□□□□ 0.6
SPIDR-201ENST00000297423 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
SPIDR-201ENST00000297423 ESPNB1AK53 854 aa18.79■□□□□ 0.6
SPIDR-201ENST00000297423 FTSJ3Q8IY81 847 aaKnown RBP18.79■□□□□ 0.6
SPIDR-201ENST00000297423 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
SPIDR-201ENST00000297423 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
SPIDR-201ENST00000297423 UGGT1Q9NYU2 1555 aa18.78■□□□□ 0.6
SPIDR-201ENST00000297423 RRP9O43818 475 aaKnown RBP18.78■□□□□ 0.6
SPIDR-201ENST00000297423 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
SPIDR-201ENST00000297423 IDI1Q13907 227 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 RPGRIP1LQ68CZ1 1315 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 CLTCL1P53675 1640 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
SPIDR-201ENST00000297423 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.6
SPIDR-201ENST00000297423 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.59
SPIDR-201ENST00000297423 FBXO31Q5XUX0 539 aaPredicted RBP18.76■□□□□ 0.59
SPIDR-201ENST00000297423 ABCC3O15438 1527 aa18.76■□□□□ 0.59
SPIDR-201ENST00000297423 LMTK2Q8IWU2 1503 aa18.76■□□□□ 0.59
SPIDR-201ENST00000297423 CEP152O94986 1710 aa18.76■□□□□ 0.59
SPIDR-201ENST00000297423 GPRASP1Q5JY77 1395 aa18.76■□□□□ 0.59
SPIDR-201ENST00000297423 MROH1Q8NDA8 1641 aa18.76■□□□□ 0.59
SPIDR-201ENST00000297423 GRPEL1Q9HAV7 217 aa18.75■□□□□ 0.59
SPIDR-201ENST00000297423 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
SPIDR-201ENST00000297423 NOS1P29475 1434 aa18.75■□□□□ 0.59
SPIDR-201ENST00000297423 MRE11P49959 708 aa18.74■□□□□ 0.59
SPIDR-201ENST00000297423 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
SPIDR-201ENST00000297423 RNF17Q9BXT8 1623 aaKnown RBP18.74■□□□□ 0.59
SPIDR-201ENST00000297423 PPRC1Q5VV67 1664 aaKnown RBP18.74■□□□□ 0.59
SPIDR-201ENST00000297423 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
SPIDR-201ENST00000297423 CHMP5Q9NZZ3 219 aa18.74■□□□□ 0.59
SPIDR-201ENST00000297423 PDZRN3Q9UPQ7 1066 aa18.74■□□□□ 0.59
SPIDR-201ENST00000297423 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
SPIDR-201ENST00000297423 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
SPIDR-201ENST00000297423 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
SPIDR-201ENST00000297423 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
SPIDR-201ENST00000297423 SPINK5Q9NQ38 1064 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-201ENST00000297423 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
SPIDR-201ENST00000297423 CLCN1P35523 988 aa18.71■□□□□ 0.59
SPIDR-201ENST00000297423 DNTTIP2Q5QJE6 756 aaKnown RBP18.71■□□□□ 0.59
SPIDR-201ENST00000297423 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
SPIDR-201ENST00000297423 R3HCC1Q9Y3T6 440 aaKnown RBP18.71■□□□□ 0.59
SPIDR-201ENST00000297423 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
SPIDR-201ENST00000297423 TRPM1Q7Z4N2 1603 aa18.7■□□□□ 0.58
SPIDR-201ENST00000297423 SCAF11Q99590 1463 aaKnown RBP18.7■□□□□ 0.58
SPIDR-201ENST00000297423 STK26Q9P289 416 aa18.69■□□□□ 0.58
SPIDR-201ENST00000297423 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
SPIDR-201ENST00000297423 TESK2Q96S53 571 aa18.69■□□□□ 0.58
SPIDR-201ENST00000297423 KIF1BO60333 1816 aa18.68■□□□□ 0.58
SPIDR-201ENST00000297423 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
SPIDR-201ENST00000297423 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
SPIDR-201ENST00000297423 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
SPIDR-201ENST00000297423 ZMYM4Q5VZL5 1548 aa18.68■□□□□ 0.58
SPIDR-201ENST00000297423 CGNL1Q0VF96 1302 aa18.67■□□□□ 0.58
SPIDR-201ENST00000297423 FOXD4L5Q5VV16 416 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-201ENST00000297423 FOXD4L4Q8WXT5 416 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-201ENST00000297423 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
SPIDR-201ENST00000297423 DISP3Q9P2K9 1392 aa18.67■□□□□ 0.58
SPIDR-201ENST00000297423 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
SPIDR-201ENST00000297423 PTMAP06454 111 aaKnown RBP18.66■□□□□ 0.58
SPIDR-201ENST00000297423 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
SPIDR-201ENST00000297423 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
SPIDR-201ENST00000297423 PRDM10Q9NQV6 1147 aa18.66■□□□□ 0.58
SPIDR-201ENST00000297423 ARHGAP31Q2M1Z3 1444 aa18.66■□□□□ 0.58
SPIDR-201ENST00000297423 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■■□ 22
SPIDR-201ENST00000297423 MPNDQ8N594 471 aa18.66■□□□□ 0.58
SPIDR-201ENST00000297423 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
SPIDR-201ENST00000297423 DDX49Q9Y6V7 483 aaKnown RBP18.66■□□□□ 0.58
SPIDR-201ENST00000297423 GBP4Q96PP9 640 aa18.65■□□□□ 0.58
SPIDR-201ENST00000297423 BCORL1Q5H9F3 1711 aa18.65■□□□□ 0.58
SPIDR-201ENST00000297423 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
SPIDR-201ENST00000297423 HDGFP51858 240 aaKnown RBP18.64■□□□□ 0.57
SPIDR-201ENST00000297423 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
SPIDR-201ENST00000297423 E9PSI1 815 aa18.64■□□□□ 0.57
SPIDR-201ENST00000297423 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-201ENST00000297423 MYOM2P54296 1465 aa18.63■□□□□ 0.57
SPIDR-201ENST00000297423 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
SPIDR-201ENST00000297423 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
SPIDR-201ENST00000297423 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-201ENST00000297423 NASPP49321 788 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-201ENST00000297423 PCDHB15Q9Y5E8 787 aa18.6■□□□□ 0.57
SPIDR-201ENST00000297423 PLCB2Q00722 1185 aa18.6■□□□□ 0.57
SPIDR-201ENST00000297423 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
SPIDR-201ENST00000297423 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
SPIDR-201ENST00000297423 ADGRB3O60242 1522 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms