RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TOM1L2Q6ZVM7 507 aa21.83■■□□□ 1.08
CDC42EP3-201ENST00000295324 ATAD2Q6PL18 1390 aa21.82■■□□□ 1.08
CDC42EP3-201ENST00000295324 AIMP1Q12904 312 aaKnown RBP21.82■■□□□ 1.08
CDC42EP3-201ENST00000295324 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
CDC42EP3-201ENST00000295324 SF3B2Q13435 895 aaKnown RBP21.81■■□□□ 1.08
CDC42EP3-201ENST00000295324 BRD4O60885 1362 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP3-201ENST00000295324 RASSF8Q8NHQ8 419 aa21.81■■□□□ 1.08
CDC42EP3-201ENST00000295324 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
CDC42EP3-201ENST00000295324 PPP6R1Q9UPN7 881 aa21.8■■□□□ 1.08
CDC42EP3-201ENST00000295324 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
CDC42EP3-201ENST00000295324 MARCH6O60337 910 aa21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 SLKQ9H2G2 1235 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 DCAF8L1A6NGE4 600 aa21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 SYAP1Q96A49 352 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP3-201ENST00000295324 KIF14Q15058 1648 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 CRBNQ96SW2 442 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 SYNE3Q6ZMZ3 975 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 DRC7Q8IY82 874 aa21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
CDC42EP3-201ENST00000295324 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
CDC42EP3-201ENST00000295324 FBXW7Q969H0 707 aa21.77■■□□□ 1.08
CDC42EP3-201ENST00000295324 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
CDC42EP3-201ENST00000295324 AKAP17AQ02040 695 aaKnown RBP21.77■■□□□ 1.08
CDC42EP3-201ENST00000295324 AKNAQ7Z591 1439 aa21.77■■□□□ 1.07
CDC42EP3-201ENST00000295324 SPG7Q9UQ90 795 aa21.76■■□□□ 1.07
CDC42EP3-201ENST00000295324 VPS53Q5VIR6 699 aa21.76■■□□□ 1.07
CDC42EP3-201ENST00000295324 ADAMTS8Q9UP79 889 aa21.76■■□□□ 1.07
CDC42EP3-201ENST00000295324 CPLX2Q6PUV4 134 aaKnown RBP21.76■■□□□ 1.07
CDC42EP3-201ENST00000295324 CAMSAP2Q08AD1 1489 aa21.75■■□□□ 1.07
CDC42EP3-201ENST00000295324 EXOC6Q8TAG9 804 aa21.75■■□□□ 1.07
CDC42EP3-201ENST00000295324 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
CDC42EP3-201ENST00000295324 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
CDC42EP3-201ENST00000295324 UBTFL1P0CB47 393 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP3-201ENST00000295324 APPP05067 770 aa21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 RBM19Q9Y4C8 960 aaKnown RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 ZKSCAN1P17029 563 aaPredicted RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 PNISRQ8TF01 805 aaKnown RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 KIF6Q6ZMV9 814 aa21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 NUDT16Q96DE0 195 aaKnown RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 CTDP1Q9Y5B0 961 aaPredicted RBP21.73■■□□□ 1.07
CDC42EP3-201ENST00000295324 CHAF1AQ13111 956 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 REC8O95072 547 aa21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 AAMPQ13685 434 aa21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 CABP4P57796 275 aa21.72■■□□□ 1.07
CDC42EP3-201ENST00000295324 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
CDC42EP3-201ENST00000295324 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
CDC42EP3-201ENST00000295324 ERC2O15083 957 aa21.71■■□□□ 1.07
CDC42EP3-201ENST00000295324 KCNH5Q8NCM2 988 aa21.71■■□□□ 1.07
CDC42EP3-201ENST00000295324 FANCAO15360 1455 aa21.71■■□□□ 1.07
CDC42EP3-201ENST00000295324 TPM4P67936 248 aa21.7■■□□□ 1.06
CDC42EP3-201ENST00000295324 SF3A1Q15459 793 aaKnown RBP21.7■■□□□ 1.06
CDC42EP3-201ENST00000295324 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
CDC42EP3-201ENST00000295324 FAM184AQ8NB25 1140 aa21.7■■□□□ 1.06
CDC42EP3-201ENST00000295324 NAIPQ13075 1403 aa21.69■■□□□ 1.06
CDC42EP3-201ENST00000295324 GNAI3P08754 354 aa21.69■■□□□ 1.06
CDC42EP3-201ENST00000295324 TRDNQ13061 729 aa21.69■■□□□ 1.06
CDC42EP3-201ENST00000295324 RAD21O60216 631 aa21.69■■□□□ 1.06
CDC42EP3-201ENST00000295324 NEUROD6Q96NK8 337 aa21.68■■□□□ 1.06
CDC42EP3-201ENST00000295324 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
CDC42EP3-201ENST00000295324 H3BQV1 296 aa21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 IFFO2Q5TF58 517 aa21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 KIAA2012Q0VF49 1180 aa21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 FAM161AQ3B820 660 aa21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 RNF20Q5VTR2 975 aa21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 XPCQ01831 940 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP3-201ENST00000295324 ABCC5O15440 1437 aa21.66■■□□□ 1.06
CDC42EP3-201ENST00000295324 FBXO31Q5XUX0 539 aaPredicted RBP21.66■■□□□ 1.06
CDC42EP3-201ENST00000295324 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
CDC42EP3-201ENST00000295324 WWC1Q8IX03 1113 aa21.65■■□□□ 1.06
CDC42EP3-201ENST00000295324 IDI1Q13907 227 aa21.65■■□□□ 1.06
CDC42EP3-201ENST00000295324 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.06
CDC42EP3-201ENST00000295324 TWISTNBQ3B726 338 aaPredicted RBP21.64■■□□□ 1.06
CDC42EP3-201ENST00000295324 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
CDC42EP3-201ENST00000295324 AMOTL2Q9Y2J4 779 aa21.64■■□□□ 1.05
CDC42EP3-201ENST00000295324 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
CDC42EP3-201ENST00000295324 FOXD4L1Q9NU39 408 aa21.63■■□□□ 1.05
CDC42EP3-201ENST00000295324 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
CDC42EP3-201ENST00000295324 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
CDC42EP3-201ENST00000295324 DHX29Q7Z478 1369 aaKnown RBP21.61■■□□□ 1.05
CDC42EP3-201ENST00000295324 TEX14Q8IWB6 1497 aa21.61■■□□□ 1.05
CDC42EP3-201ENST00000295324 CPLX1O14810 134 aa21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 DHX16O60231 1041 aaKnown RBP21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 CLASRPQ8N2M8 674 aaKnown RBP21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 MSNP26038 577 aaKnown RBP21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 ERICH2A1L162 156 aa21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 TRIM29Q14134 588 aa21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 RRS1Q15050 365 aaKnown RBP21.6■■□□□ 1.05
CDC42EP3-201ENST00000295324 PHF8Q9UPP1 1060 aa21.59■■□□□ 1.05
CDC42EP3-201ENST00000295324 ANO2Q9NQ90 1003 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms