RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 TRAK1Q9UPV9 953 aa32.62■■■□□ 2.81
GFRA4-201ENST00000290417 BRINP3Q76B58 766 aa32.61■■■□□ 2.81
GFRA4-201ENST00000290417 PRAM1Q96QH2 718 aa32.61■■■□□ 2.81
GFRA4-201ENST00000290417 SAFB2Q14151 953 aaKnown RBP eCLIP32.6■■■□□ 2.81
GFRA4-201ENST00000290417 C1orf167Q5SNV9 1468 aa32.59■■■□□ 2.81
GFRA4-201ENST00000290417 POGKQ9P215 609 aa32.59■■■□□ 2.81
GFRA4-201ENST00000290417 AHDC1Q5TGY3 1603 aaPredicted RBP32.56■■■□□ 2.8
GFRA4-201ENST00000290417 ARHGEF28Q8N1W1 1705 aaKnown RBP32.54■■■□□ 2.8
GFRA4-201ENST00000290417 COL16A1Q07092 1604 aaPredicted RBP32.54■■■□□ 2.8
GFRA4-201ENST00000290417 NBPF1Q3BBV0 1214 aa32.53■■■□□ 2.8
GFRA4-201ENST00000290417 FMN2Q9NZ56 1722 aa32.52■■■□□ 2.8
GFRA4-201ENST00000290417 NHSL1Q5SYE7 1610 aa32.52■■■□□ 2.8
GFRA4-201ENST00000290417 TONSLQ96HA7 1378 aa32.51■■■□□ 2.8
GFRA4-201ENST00000290417 NUTM2FA1L443 756 aa32.5■■■□□ 2.79
GFRA4-201ENST00000290417 ORAI2Q96SN7 254 aa32.5■■■□□ 2.79
GFRA4-201ENST00000290417 TRPM1Q7Z4N2 1603 aa32.49■■■□□ 2.79
GFRA4-201ENST00000290417 MED1Q15648 1581 aaPredicted RBP32.47■■■□□ 2.79
GFRA4-201ENST00000290417 DDX17Q92841 729 aaKnown RBP32.46■■■□□ 2.79
GFRA4-201ENST00000290417 DISP3Q9P2K9 1392 aa32.46■■■□□ 2.79
GFRA4-201ENST00000290417 ESCO1Q5FWF5 840 aa32.45■■■□□ 2.79
GFRA4-201ENST00000290417 MINK1Q8N4C8 1332 aaPredicted RBP32.45■■■□□ 2.79
GFRA4-201ENST00000290417 ADGRB2O60241 1585 aa32.45■■■□□ 2.79
GFRA4-201ENST00000290417 HIRIP3Q9BW71 556 aaPredicted RBP32.44■■■□□ 2.78
GFRA4-201ENST00000290417 RGPD8O14715 1765 aaPredicted RBP32.44■■■□□ 2.78
GFRA4-201ENST00000290417 JCADQ9P266 1359 aa32.42■■■□□ 2.78
GFRA4-201ENST00000290417 NBPF8Q3BBV2 869 aa32.4■■■□□ 2.78
GFRA4-201ENST00000290417 ROCK2O75116 1388 aaKnown RBP32.37■■■□□ 2.77
GFRA4-201ENST00000290417 SHPRHQ149N8 1683 aa32.36■■■□□ 2.77
GFRA4-201ENST00000290417 USP32Q8NFA0 1604 aa32.34■■■□□ 2.77
GFRA4-201ENST00000290417 KIF1AQ12756 1690 aa32.34■■■□□ 2.77
GFRA4-201ENST00000290417 WASLO00401 505 aaPredicted RBP32.33■■■□□ 2.77
GFRA4-201ENST00000290417 LRRC59Q96AG4 307 aaKnown RBP32.33■■■□□ 2.77
GFRA4-201ENST00000290417 NPHP3Q7Z494 1330 aa32.31■■■□□ 2.76
GFRA4-201ENST00000290417 CLSPNQ9HAW4 1339 aa32.31■■■□□ 2.76
GFRA4-201ENST00000290417 ANKARQ7Z5J8 1434 aa32.31■■■□□ 2.76
GFRA4-201ENST00000290417 FOXO3O43524 673 aa32.31■■■□□ 2.76
GFRA4-201ENST00000290417 SOS2Q07890 1332 aaPredicted RBP32.3■■■□□ 2.76
GFRA4-201ENST00000290417 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
GFRA4-201ENST00000290417 QRICH2Q9H0J4 1663 aa32.3■■■□□ 2.76
GFRA4-201ENST00000290417 CENPJQ9HC77 1338 aaPredicted RBP32.3■■■□□ 2.76
GFRA4-201ENST00000290417 TULP4Q9NRJ4 1543 aa32.29■■■□□ 2.76
GFRA4-201ENST00000290417 PHF8Q9UPP1 1060 aa32.28■■■□□ 2.76
GFRA4-201ENST00000290417 CCER1Q8TC90 406 aaPredicted RBP32.27■■■□□ 2.76
GFRA4-201ENST00000290417 PHF23Q9BUL5 403 aaPredicted RBP32.27■■■□□ 2.76
GFRA4-201ENST00000290417 SPATA31A6Q5VVP1 1343 aa32.27■■■□□ 2.76
GFRA4-201ENST00000290417 XPCQ01831 940 aaPredicted RBP32.26■■■□□ 2.76
GFRA4-201ENST00000290417 RALGAPBQ86X10 1494 aa32.25■■■□□ 2.75
GFRA4-201ENST00000290417 PXDNQ92626 1479 aa32.25■■■□□ 2.75
GFRA4-201ENST00000290417 GPRASP1Q5JY77 1395 aa32.25■■■□□ 2.75
GFRA4-201ENST00000290417 PRR36Q9H6K5 1346 aa32.24■■■□□ 2.75
GFRA4-201ENST00000290417 CDK19Q9BWU1 502 aa32.23■■■□□ 2.75
GFRA4-201ENST00000290417 PNPLA6Q8IY17 1366 aa32.22■■■□□ 2.75
GFRA4-201ENST00000290417 CARD11Q9BXL7 1154 aa32.22■■■□□ 2.75
GFRA4-201ENST00000290417 PMFBP1Q8TBY8 1022 aa32.21■■■□□ 2.75
GFRA4-201ENST00000290417 LRP6O75581 1613 aa32.21■■■□□ 2.75
GFRA4-201ENST00000290417 ITSN1Q15811 1721 aa32.21■■■□□ 2.75
GFRA4-201ENST00000290417 NUTM2BA6NNL0 878 aaPredicted RBP32.19■■■□□ 2.74
GFRA4-201ENST00000290417 NUTM2EB1AL46 878 aaPredicted RBP32.19■■■□□ 2.74
GFRA4-201ENST00000290417 NUTM2AQ8IVF1 878 aaPredicted RBP32.19■■■□□ 2.74
GFRA4-201ENST00000290417 ATP7BP35670 1465 aa32.18■■■□□ 2.74
GFRA4-201ENST00000290417 KRT28Q7Z3Y7 464 aa32.17■■■□□ 2.74
GFRA4-201ENST00000290417 NUDT16Q96DE0 195 aaKnown RBP32.17■■■□□ 2.74
GFRA4-201ENST00000290417 MEX3CQ5U5Q3 659 aaKnown RBP32.16■■■□□ 2.74
GFRA4-201ENST00000290417 PSME1Q06323 249 aa32.14■■■□□ 2.74
GFRA4-201ENST00000290417 TIMELESSQ9UNS1 1208 aa32.14■■■□□ 2.74
GFRA4-201ENST00000290417 SRPK2P78362 688 aaKnown RBP32.13■■■□□ 2.73
GFRA4-201ENST00000290417 TOPAZ1Q8N9V7 1692 aa32.13■■■□□ 2.73
GFRA4-201ENST00000290417 COL22A1Q8NFW1 1626 aaPredicted RBP32.12■■■□□ 2.73
GFRA4-201ENST00000290417 CABP2Q9NPB3 220 aa32.1■■■□□ 2.73
GFRA4-201ENST00000290417 ILDR2Q71H61 639 aa32.09■■■□□ 2.73
GFRA4-201ENST00000290417 NGDNQ8NEJ9 315 aaKnown RBP32.09■■■□□ 2.73
GFRA4-201ENST00000290417 SPATA31A3Q5VYP0 1347 aa32.09■■■□□ 2.73
GFRA4-201ENST00000290417 RGS17Q9UGC6 210 aaPredicted RBP32.08■■■□□ 2.73
GFRA4-201ENST00000290417 CCDC61Q9Y6R9 512 aa32.08■■■□□ 2.73
GFRA4-201ENST00000290417 EVC2Q86UK5 1308 aa32.07■■■□□ 2.72
GFRA4-201ENST00000290417 TNS3Q68CZ2 1445 aa32.06■■■□□ 2.72
GFRA4-201ENST00000290417 TRPM3Q9HCF6 1732 aaPredicted RBP32.05■■■□□ 2.72
GFRA4-201ENST00000290417 SBNO1A3KN83 1393 aa32.05■■■□□ 2.72
GFRA4-201ENST00000290417 ADAMTS2O95450 1211 aa32.02■■■□□ 2.72
GFRA4-201ENST00000290417 LMOD2Q6P5Q4 547 aa32.02■■■□□ 2.72
GFRA4-201ENST00000290417 PPIP5K1Q6PFW1 1433 aa32.01■■■□□ 2.72
GFRA4-201ENST00000290417 SBNO2Q9Y2G9 1366 aa32■■■□□ 2.71
GFRA4-201ENST00000290417 PLEKHG3A1L390 1219 aa32■■■□□ 2.71
GFRA4-201ENST00000290417 ACEP12821 1306 aa31.99■■■□□ 2.71
GFRA4-201ENST00000290417 C8orf37Q96NL8 207 aa31.98■■■□□ 2.71
GFRA4-201ENST00000290417 POLR3AO14802 1390 aaPredicted RBP31.98■■■□□ 2.71
GFRA4-201ENST00000290417 ALS2Q96Q42 1657 aa31.97■■■□□ 2.71
GFRA4-201ENST00000290417 ARHGEF10O15013 1369 aa31.97■■■□□ 2.71
GFRA4-201ENST00000290417 MARF1Q9Y4F3 1742 aaKnown RBP31.96■■■□□ 2.71
GFRA4-201ENST00000290417 PAK3O75914 559 aaPredicted RBP31.96■■■□□ 2.71
GFRA4-201ENST00000290417 PLEKHG5O94827 1062 aa31.96■■■□□ 2.71
GFRA4-201ENST00000290417 POTEAQ6S8J7 498 aa31.94■■■□□ 2.7
GFRA4-201ENST00000290417 AFF2P51816 1311 aa31.93■■■□□ 2.7
GFRA4-201ENST00000290417 ST20-MTHFSA0A0A6YYL1 179 aa31.93■■■□□ 2.7
GFRA4-201ENST00000290417 CABP1Q9NZU7 370 aa31.93■■■□□ 2.7
GFRA4-201ENST00000290417 USP47Q96K76 1375 aa31.92■■■□□ 2.7
GFRA4-201ENST00000290417 ABCA3Q99758 1704 aa31.92■■■□□ 2.7
GFRA4-201ENST00000290417 ZNF772Q68DY9 489 aaPredicted RBP31.92■■■□□ 2.7
GFRA4-201ENST00000290417 NGLY1Q96IV0 654 aa31.92■■■□□ 2.7
GFRA4-201ENST00000290417 HAP1P54257 671 aaPredicted RBP31.91■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms