RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
ACTC1-201ENST00000290378 NUTM2GQ5VZR2 741 aa13.77□□□□□ -0.21
ACTC1-201ENST00000290378 MCM4P33991 863 aa13.76□□□□□ -0.21
ACTC1-201ENST00000290378 GBP4Q96PP9 640 aa13.76□□□□□ -0.21
ACTC1-201ENST00000290378 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
ACTC1-201ENST00000290378 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
ACTC1-201ENST00000290378 CHMP5Q9NZZ3 219 aa13.76□□□□□ -0.21
ACTC1-201ENST00000290378 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
ACTC1-201ENST00000290378 ABCC10Q5T3U5 1492 aa13.75□□□□□ -0.21
ACTC1-201ENST00000290378 ABCA8O94911 1581 aa13.75□□□□□ -0.21
ACTC1-201ENST00000290378 IGHDP01880 384 aa13.75□□□□□ -0.21
ACTC1-201ENST00000290378 MRE11P49959 708 aa13.75□□□□□ -0.21
ACTC1-201ENST00000290378 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
ACTC1-201ENST00000290378 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
ACTC1-201ENST00000290378 HMOX1P09601 288 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 BRD4O60885 1362 aaPredicted RBP13.74□□□□□ -0.21
ACTC1-201ENST00000290378 NOS1P29475 1434 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
ACTC1-201ENST00000290378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.74□□□□□ -0.21
ACTC1-201ENST00000290378 TBC1D2Q9BYX2 928 aa13.73□□□□□ -0.21
ACTC1-201ENST00000290378 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
ACTC1-201ENST00000290378 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
ACTC1-201ENST00000290378 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
ACTC1-201ENST00000290378 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
ACTC1-201ENST00000290378 PMFBP1Q8TBY8 1022 aa13.72□□□□□ -0.21
ACTC1-201ENST00000290378 FBLN1P23142 703 aa13.72□□□□□ -0.21
ACTC1-201ENST00000290378 LRRIQ1Q96JM4 1722 aa13.71□□□□□ -0.21
ACTC1-201ENST00000290378 RNF214Q8ND24 703 aa13.71□□□□□ -0.21
ACTC1-201ENST00000290378 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
ACTC1-201ENST00000290378 STAC3Q96MF2 364 aa13.71□□□□□ -0.22
ACTC1-201ENST00000290378 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 PDE4CQ08493 712 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 LNPKQ9C0E8 428 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 CLCN1P35523 988 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
ACTC1-201ENST00000290378 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
ACTC1-201ENST00000290378 TESK2Q96S53 571 aa13.69□□□□□ -0.22
ACTC1-201ENST00000290378 TTC37Q6PGP7 1564 aa13.69□□□□□ -0.22
ACTC1-201ENST00000290378 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
ACTC1-201ENST00000290378 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
ACTC1-201ENST00000290378 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
ACTC1-201ENST00000290378 A2MP01023 1474 aa13.68□□□□□ -0.22
ACTC1-201ENST00000290378 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
ACTC1-201ENST00000290378 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
ACTC1-201ENST00000290378 COG3Q96JB2 828 aa13.67□□□□□ -0.22
ACTC1-201ENST00000290378 TPM2P07951 284 aa13.67□□□□□ -0.22
ACTC1-201ENST00000290378 AMPHP49418 695 aa13.67□□□□□ -0.22
ACTC1-201ENST00000290378 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
ACTC1-201ENST00000290378 PDCL3Q9H2J4 239 aa13.66□□□□□ -0.22
ACTC1-201ENST00000290378 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
ACTC1-201ENST00000290378 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
ACTC1-201ENST00000290378 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
ACTC1-201ENST00000290378 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
ACTC1-201ENST00000290378 CAVIN1Q6NZI2 390 aaKnown RBP13.65□□□□□ -0.22
ACTC1-201ENST00000290378 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
ACTC1-201ENST00000290378 E9PSI1 815 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 XPCQ01831 940 aaPredicted RBP13.64□□□□□ -0.23
ACTC1-201ENST00000290378 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 ZNF518AQ6AHZ1 1483 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 RIPK4P57078 832 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
ACTC1-201ENST00000290378 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
ACTC1-201ENST00000290378 RALGAPBQ86X10 1494 aa13.63□□□□□ -0.23
ACTC1-201ENST00000290378 RRS1Q15050 365 aaKnown RBP13.63□□□□□ -0.23
ACTC1-201ENST00000290378 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
ACTC1-201ENST00000290378 C14orf93Q9H972 538 aaKnown RBP13.62□□□□□ -0.23
ACTC1-201ENST00000290378 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
ACTC1-201ENST00000290378 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
ACTC1-201ENST00000290378 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
ACTC1-201ENST00000290378 UQCRHLA0A096LP55 91 aa13.61□□□□□ -0.23
ACTC1-201ENST00000290378 UQCRHP07919 91 aa13.61□□□□□ -0.23
ACTC1-201ENST00000290378 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.61□□□□□ -0.23
ACTC1-201ENST00000290378 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
ACTC1-201ENST00000290378 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
ACTC1-201ENST00000290378 NECTIN2Q92692 538 aa13.6□□□□□ -0.23
ACTC1-201ENST00000290378 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
ACTC1-201ENST00000290378 IGSF3O75054 1194 aa13.59□□□□□ -0.23
ACTC1-201ENST00000290378 RPGRIP1LQ68CZ1 1315 aa13.59□□□□□ -0.23
ACTC1-201ENST00000290378 SCAF11Q99590 1463 aaKnown RBP13.59□□□□□ -0.23
ACTC1-201ENST00000290378 SLFN5Q08AF3 891 aa13.58□□□□□ -0.23
ACTC1-201ENST00000290378 CDC42BPAQ5VT25 1732 aa13.58□□□□□ -0.23
ACTC1-201ENST00000290378 ATP7AQ04656 1500 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 PRKAR2BP31323 418 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 NLRP6P59044 892 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 CBX1P83916 185 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 YEATS2Q9ULM3 1422 aa13.58□□□□□ -0.24
ACTC1-201ENST00000290378 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
ACTC1-201ENST00000290378 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
ACTC1-201ENST00000290378 C1orf115Q9H7X2 142 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 UGGT1Q9NYU2 1555 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 CSB-PGBD3P0DP91 1061 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
ACTC1-201ENST00000290378 NME9Q86XW9 330 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms