RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 ATF3P18847 181 aa21.72■■□□□ 1.07
NCK1-201ENST00000288986 TOM1O60784 492 aa21.71■■□□□ 1.07
NCK1-201ENST00000288986 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
NCK1-201ENST00000288986 CADPS2Q86UW7 1296 aa21.69■■□□□ 1.06
NCK1-201ENST00000288986 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
NCK1-201ENST00000288986 MINK1Q8N4C8 1332 aaPredicted RBP21.68■■□□□ 1.06
NCK1-201ENST00000288986 CENPJQ9HC77 1338 aaPredicted RBP21.68■■□□□ 1.06
NCK1-201ENST00000288986 EIF3AQ14152 1382 aaKnown RBP21.68■■□□□ 1.06
NCK1-201ENST00000288986 ARHGEF28Q8N1W1 1705 aaKnown RBP21.66■■□□□ 1.06
NCK1-201ENST00000288986 PIP4K2BP78356 416 aa21.66■■□□□ 1.06
NCK1-201ENST00000288986 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
NCK1-201ENST00000288986 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.65■■□□□ 1.06
NCK1-201ENST00000288986 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
NCK1-201ENST00000288986 NALCNQ8IZF0 1738 aa21.64■■□□□ 1.06
NCK1-201ENST00000288986 DCCP43146 1447 aa21.64■■□□□ 1.05
NCK1-201ENST00000288986 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
NCK1-201ENST00000288986 USP47Q96K76 1375 aa21.61■■□□□ 1.05
NCK1-201ENST00000288986 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
NCK1-201ENST00000288986 FBXO41Q8TF61 875 aa21.6■■□□□ 1.05
NCK1-201ENST00000288986 WASLO00401 505 aaPredicted RBP21.59■■□□□ 1.05
NCK1-201ENST00000288986 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
NCK1-201ENST00000288986 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
NCK1-201ENST00000288986 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
NCK1-201ENST00000288986 MST1RQ04912 1400 aa21.57■■□□□ 1.04
NCK1-201ENST00000288986 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
NCK1-201ENST00000288986 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
NCK1-201ENST00000288986 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
NCK1-201ENST00000288986 EVC2Q86UK5 1308 aa21.54■■□□□ 1.04
NCK1-201ENST00000288986 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
NCK1-201ENST00000288986 C1orf167Q5SNV9 1468 aa21.54■■□□□ 1.04
NCK1-201ENST00000288986 ADGRB2O60241 1585 aa21.53■■□□□ 1.04
NCK1-201ENST00000288986 HSPA5P11021 654 aaKnown RBP21.52■■□□□ 1.04
NCK1-201ENST00000288986 BRINP3Q76B58 766 aa21.52■■□□□ 1.04
NCK1-201ENST00000288986 TESK2Q96S53 571 aa21.52■■□□□ 1.04
NCK1-201ENST00000288986 CABP2Q9NPB3 220 aa21.52■■□□□ 1.04
NCK1-201ENST00000288986 SBNO2Q9Y2G9 1366 aa21.51■■□□□ 1.03
NCK1-201ENST00000288986 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
NCK1-201ENST00000288986 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
NCK1-201ENST00000288986 FMN2Q9NZ56 1722 aa21.49■■□□□ 1.03
NCK1-201ENST00000288986 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
NCK1-201ENST00000288986 PRR36Q9H6K5 1346 aa21.48■■□□□ 1.03
NCK1-201ENST00000288986 TMF1P82094 1093 aa21.47■■□□□ 1.03
NCK1-201ENST00000288986 ANKARQ7Z5J8 1434 aa21.47■■□□□ 1.03
NCK1-201ENST00000288986 TULP4Q9NRJ4 1543 aa21.47■■□□□ 1.03
NCK1-201ENST00000288986 ROBO1Q9Y6N7 1651 aa21.47■■□□□ 1.03
NCK1-201ENST00000288986 PMFBP1Q8TBY8 1022 aa21.46■■□□□ 1.03
NCK1-201ENST00000288986 CCDC61Q9Y6R9 512 aa21.46■■□□□ 1.03
NCK1-201ENST00000288986 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
NCK1-201ENST00000288986 FOXO3O43524 673 aa21.45■■□□□ 1.02
NCK1-201ENST00000288986 DDX17Q92841 729 aaKnown RBP21.45■■□□□ 1.02
NCK1-201ENST00000288986 ILDR1Q86SU0 546 aaPredicted RBP21.44■■□□□ 1.02
NCK1-201ENST00000288986 ATP7BP35670 1465 aa21.43■■□□□ 1.02
NCK1-201ENST00000288986 HSPA1LP34931 641 aa21.43■■□□□ 1.02
NCK1-201ENST00000288986 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
NCK1-201ENST00000288986 USP32Q8NFA0 1604 aa21.42■■□□□ 1.02
NCK1-201ENST00000288986 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
NCK1-201ENST00000288986 NGDNQ8NEJ9 315 aaKnown RBP21.41■■□□□ 1.02
NCK1-201ENST00000288986 CABP1Q9NZU7 370 aa21.41■■□□□ 1.02
NCK1-201ENST00000288986 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
NCK1-201ENST00000288986 ATAD2Q6PL18 1390 aa21.4■■□□□ 1.02
NCK1-201ENST00000288986 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
NCK1-201ENST00000288986 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.01
NCK1-201ENST00000288986 TMC1Q8TDI8 760 aa21.39■■□□□ 1.01
NCK1-201ENST00000288986 PPIP5K1Q6PFW1 1433 aa21.38■■□□□ 1.01
NCK1-201ENST00000288986 PSME1Q06323 249 aa21.38■■□□□ 1.01
NCK1-201ENST00000288986 PUS7Q96PZ0 661 aaKnown RBP21.38■■□□□ 1.01
NCK1-201ENST00000288986 POLR3GLQ9BT43 218 aa21.37■■□□□ 1.01
NCK1-201ENST00000288986 PLEKHG3A1L390 1219 aa21.37■■□□□ 1.01
NCK1-201ENST00000288986 ACEP12821 1306 aa21.36■■□□□ 1.01
NCK1-201ENST00000288986 KRT28Q7Z3Y7 464 aa21.35■■□□□ 1.01
NCK1-201ENST00000288986 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
NCK1-201ENST00000288986 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1.01
NCK1-201ENST00000288986 KIF1AQ12756 1690 aa21.33■■□□□ 1.01
NCK1-201ENST00000288986 ITSN1Q15811 1721 aa21.33■■□□□ 1.01
NCK1-201ENST00000288986 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1
NCK1-201ENST00000288986 LRRC59Q96AG4 307 aaKnown RBP21.33■■□□□ 1
NCK1-201ENST00000288986 C11orf95C9JLR9 678 aaPredicted RBP21.32■■□□□ 1
NCK1-201ENST00000288986 PHLPP1O60346 1717 aa21.32■■□□□ 1
NCK1-201ENST00000288986 NHSL1Q5SYE7 1610 aa21.31■■□□□ 1
NCK1-201ENST00000288986 TOPAZ1Q8N9V7 1692 aa21.31■■□□□ 1
NCK1-201ENST00000288986 POLR3AO14802 1390 aaPredicted RBP21.31■■□□□ 1
NCK1-201ENST00000288986 PAK3O75914 559 aaPredicted RBP21.29■■□□□ 1
NCK1-201ENST00000288986 ZNF692Q9BU19 519 aaPredicted RBP21.29■■□□□ 1
NCK1-201ENST00000288986 LMOD2Q6P5Q4 547 aa21.28■■□□□ 1
NCK1-201ENST00000288986 PXDNQ92626 1479 aa21.28■■□□□ 1
NCK1-201ENST00000288986 HDGFL2Q7Z4V5 671 aaPredicted RBP21.27■■□□□ 1
NCK1-201ENST00000288986 TERF2IPQ9NYB0 399 aa21.27■■□□□ 1
NCK1-201ENST00000288986 COL16A1Q07092 1604 aaPredicted RBP21.27■□□□□ 0.99
NCK1-201ENST00000288986 NINLQ9Y2I6 1382 aa21.26■□□□□ 0.99
NCK1-201ENST00000288986 KIF7Q2M1P5 1343 aa21.26■□□□□ 0.99
NCK1-201ENST00000288986 SPATA31A3Q5VYP0 1347 aa21.24■□□□□ 0.99
NCK1-201ENST00000288986 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
NCK1-201ENST00000288986 JCADQ9P266 1359 aa21.23■□□□□ 0.99
NCK1-201ENST00000288986 CPSF1Q10570 1443 aaKnown RBP21.23■□□□□ 0.99
NCK1-201ENST00000288986 SBNO1A3KN83 1393 aa21.23■□□□□ 0.99
NCK1-201ENST00000288986 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
NCK1-201ENST00000288986 USP6P35125 1406 aa21.22■□□□□ 0.99
NCK1-201ENST00000288986 A0A1W2PP64 1363 aa21.22■□□□□ 0.99
NCK1-201ENST00000288986 PLEKHG5O94827 1062 aa21.21■□□□□ 0.99
NCK1-201ENST00000288986 CD163L1Q9NR16 1453 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms