RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 DLC1Q96QB1 1528 aa28.49■■■□□ 2.15
TIMP4-201ENST00000287814 SAFB2Q14151 953 aaKnown RBP eCLIP28.48■■■□□ 2.15
TIMP4-201ENST00000287814 DCCP43146 1447 aa28.47■■■□□ 2.15
TIMP4-201ENST00000287814 TRPM1Q7Z4N2 1603 aa28.46■■■□□ 2.15
TIMP4-201ENST00000287814 POGKQ9P215 609 aa28.45■■■□□ 2.15
TIMP4-201ENST00000287814 ROCK2O75116 1388 aaKnown RBP28.42■■■□□ 2.14
TIMP4-201ENST00000287814 TIMELESSQ9UNS1 1208 aa28.42■■■□□ 2.14
TIMP4-201ENST00000287814 MST1RQ04912 1400 aa28.41■■■□□ 2.14
TIMP4-201ENST00000287814 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
TIMP4-201ENST00000287814 HSPA1LP34931 641 aa28.38■■■□□ 2.13
TIMP4-201ENST00000287814 GPRASP1Q5JY77 1395 aa28.37■■■□□ 2.13
TIMP4-201ENST00000287814 CDC42BPGQ6DT37 1551 aa28.36■■■□□ 2.13
TIMP4-201ENST00000287814 ROBO1Q9Y6N7 1651 aa28.36■■■□□ 2.13
TIMP4-201ENST00000287814 HIRIP3Q9BW71 556 aaPredicted RBP28.36■■■□□ 2.13
TIMP4-201ENST00000287814 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
TIMP4-201ENST00000287814 RALGAPBQ86X10 1494 aa28.35■■■□□ 2.13
TIMP4-201ENST00000287814 BRINP3Q76B58 766 aa28.35■■■□□ 2.13
TIMP4-201ENST00000287814 C1orf167Q5SNV9 1468 aa28.35■■■□□ 2.13
TIMP4-201ENST00000287814 NUTM2FA1L443 756 aa28.34■■■□□ 2.13
TIMP4-201ENST00000287814 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
TIMP4-201ENST00000287814 CARD11Q9BXL7 1154 aa28.32■■■□□ 2.12
TIMP4-201ENST00000287814 CENPJQ9HC77 1338 aaPredicted RBP28.29■■■□□ 2.12
TIMP4-201ENST00000287814 ADGRB2O60241 1585 aa28.27■■■□□ 2.12
TIMP4-201ENST00000287814 WASLO00401 505 aaPredicted RBP28.26■■■□□ 2.11
TIMP4-201ENST00000287814 FMN2Q9NZ56 1722 aa28.25■■■□□ 2.11
TIMP4-201ENST00000287814 ESCO1Q5FWF5 840 aa28.24■■■□□ 2.11
TIMP4-201ENST00000287814 DDX17Q92841 729 aaKnown RBP28.24■■■□□ 2.11
TIMP4-201ENST00000287814 PRR36Q9H6K5 1346 aa28.2■■■□□ 2.1
TIMP4-201ENST00000287814 CDK19Q9BWU1 502 aa28.19■■■□□ 2.1
TIMP4-201ENST00000287814 EIF3AQ14152 1382 aaKnown RBP28.18■■■□□ 2.1
TIMP4-201ENST00000287814 AHDC1Q5TGY3 1603 aaPredicted RBP28.18■■■□□ 2.1
TIMP4-201ENST00000287814 QRICH2Q9H0J4 1663 aa28.18■■■□□ 2.1
TIMP4-201ENST00000287814 USP32Q8NFA0 1604 aa28.17■■■□□ 2.1
TIMP4-201ENST00000287814 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
TIMP4-201ENST00000287814 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
TIMP4-201ENST00000287814 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
TIMP4-201ENST00000287814 TULP4Q9NRJ4 1543 aa28.15■■■□□ 2.1
TIMP4-201ENST00000287814 FOXO3O43524 673 aa28.14■■■□□ 2.1
TIMP4-201ENST00000287814 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.09
TIMP4-201ENST00000287814 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
TIMP4-201ENST00000287814 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
TIMP4-201ENST00000287814 PHF8Q9UPP1 1060 aa28.13■■■□□ 2.09
TIMP4-201ENST00000287814 ST20-MTHFSA0A0A6YYL1 179 aa28.11■■■□□ 2.09
TIMP4-201ENST00000287814 PMFBP1Q8TBY8 1022 aa28.11■■■□□ 2.09
TIMP4-201ENST00000287814 CABP2Q9NPB3 220 aa28.11■■■□□ 2.09
TIMP4-201ENST00000287814 ATP7BP35670 1465 aa28.1■■■□□ 2.09
TIMP4-201ENST00000287814 SOS2Q07890 1332 aaPredicted RBP28.09■■■□□ 2.09
TIMP4-201ENST00000287814 SRPK2P78362 688 aaKnown RBP28.09■■■□□ 2.09
TIMP4-201ENST00000287814 XPCQ01831 940 aaPredicted RBP28.09■■■□□ 2.09
TIMP4-201ENST00000287814 USP47Q96K76 1375 aa28.09■■■□□ 2.09
TIMP4-201ENST00000287814 SBNO2Q9Y2G9 1366 aa28.08■■■□□ 2.09
TIMP4-201ENST00000287814 NPHP3Q7Z494 1330 aa28.08■■■□□ 2.08
TIMP4-201ENST00000287814 EVC2Q86UK5 1308 aa28.08■■■□□ 2.08
TIMP4-201ENST00000287814 TESK2Q96S53 571 aa28.07■■■□□ 2.08
TIMP4-201ENST00000287814 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
TIMP4-201ENST00000287814 PXDNQ92626 1479 aa28.04■■■□□ 2.08
TIMP4-201ENST00000287814 KIF1AQ12756 1690 aa28.04■■■□□ 2.08
TIMP4-201ENST00000287814 LRRC59Q96AG4 307 aaKnown RBP28.03■■■□□ 2.08
TIMP4-201ENST00000287814 JCADQ9P266 1359 aa28.03■■■□□ 2.08
TIMP4-201ENST00000287814 KRT28Q7Z3Y7 464 aa28.01■■■□□ 2.07
TIMP4-201ENST00000287814 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
TIMP4-201ENST00000287814 PSME1Q06323 249 aa27.99■■■□□ 2.07
TIMP4-201ENST00000287814 NGDNQ8NEJ9 315 aaKnown RBP27.98■■■□□ 2.07
TIMP4-201ENST00000287814 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
TIMP4-201ENST00000287814 CABP1Q9NZU7 370 aa27.97■■■□□ 2.07
TIMP4-201ENST00000287814 PPIP5K1Q6PFW1 1433 aa27.96■■■□□ 2.07
TIMP4-201ENST00000287814 ACEP12821 1306 aa27.96■■■□□ 2.07
TIMP4-201ENST00000287814 PNPLA6Q8IY17 1366 aa27.96■■■□□ 2.07
TIMP4-201ENST00000287814 ITSN1Q15811 1721 aa27.95■■■□□ 2.07
TIMP4-201ENST00000287814 POLR3AO14802 1390 aaPredicted RBP27.94■■■□□ 2.06
TIMP4-201ENST00000287814 SPATA31A3Q5VYP0 1347 aa27.93■■■□□ 2.06
TIMP4-201ENST00000287814 SHPRHQ149N8 1683 aa27.92■■■□□ 2.06
TIMP4-201ENST00000287814 HSPA5P11021 654 aaKnown RBP27.92■■■□□ 2.06
TIMP4-201ENST00000287814 DISP3Q9P2K9 1392 aa27.92■■■□□ 2.06
TIMP4-201ENST00000287814 EIF4G2P78344 907 aaKnown RBP eCLIP27.91■■■□□ 2.06
TIMP4-201ENST00000287814 ATAD2Q6PL18 1390 aa27.9■■■□□ 2.06
TIMP4-201ENST00000287814 SPATA31A6Q5VVP1 1343 aa27.9■■■□□ 2.06
TIMP4-201ENST00000287814 SBNO1A3KN83 1393 aa27.89■■■□□ 2.06
TIMP4-201ENST00000287814 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
TIMP4-201ENST00000287814 SLC24A1O60721 1099 aa27.88■■■□□ 2.05
TIMP4-201ENST00000287814 TMF1P82094 1093 aa27.87■■■□□ 2.05
TIMP4-201ENST00000287814 PUS7Q96PZ0 661 aaKnown RBP27.87■■■□□ 2.05
TIMP4-201ENST00000287814 LRP6O75581 1613 aa27.87■■■□□ 2.05
TIMP4-201ENST00000287814 NUTM2BA6NNL0 878 aaPredicted RBP27.87■■■□□ 2.05
TIMP4-201ENST00000287814 NUTM2EB1AL46 878 aaPredicted RBP27.87■■■□□ 2.05
TIMP4-201ENST00000287814 NUTM2AQ8IVF1 878 aaPredicted RBP27.87■■■□□ 2.05
TIMP4-201ENST00000287814 TNS3Q68CZ2 1445 aa27.86■■■□□ 2.05
TIMP4-201ENST00000287814 TRPM3Q9HCF6 1732 aaPredicted RBP27.86■■■□□ 2.05
TIMP4-201ENST00000287814 LMOD2Q6P5Q4 547 aa27.84■■■□□ 2.05
TIMP4-201ENST00000287814 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
TIMP4-201ENST00000287814 PAK3O75914 559 aaPredicted RBP27.84■■■□□ 2.05
TIMP4-201ENST00000287814 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
TIMP4-201ENST00000287814 COL22A1Q8NFW1 1626 aaPredicted RBP27.81■■■□□ 2.04
TIMP4-201ENST00000287814 CPSF1Q10570 1443 aaKnown RBP27.79■■■□□ 2.04
TIMP4-201ENST00000287814 PLEKHG5O94827 1062 aa27.79■■■□□ 2.04
TIMP4-201ENST00000287814 CABLES1Q8TDN4 633 aa27.79■■■□□ 2.04
TIMP4-201ENST00000287814 USP6P35125 1406 aa27.79■■■□□ 2.04
TIMP4-201ENST00000287814 CD163L1Q9NR16 1453 aa27.79■■■□□ 2.04
TIMP4-201ENST00000287814 ARHGEF10O15013 1369 aa27.78■■■□□ 2.04
TIMP4-201ENST00000287814 ALS2Q96Q42 1657 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms