RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 SPATA31E1Q6ZUB1 1445 aa22.56■■□□□ 1.2
PDE6D-201ENST00000287600 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
PDE6D-201ENST00000287600 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
PDE6D-201ENST00000287600 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
PDE6D-201ENST00000287600 KNDC1Q76NI1 1749 aa22.54■■□□□ 1.2
PDE6D-201ENST00000287600 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
PDE6D-201ENST00000287600 SOS2Q07890 1332 aaPredicted RBP22.54■■□□□ 1.2
PDE6D-201ENST00000287600 RAB3GAP2Q9H2M9 1393 aa22.52■■□□□ 1.2
PDE6D-201ENST00000287600 ACIN1Q9UKV3 1341 aaKnown RBP22.52■■□□□ 1.2
PDE6D-201ENST00000287600 TECPR2O15040 1411 aa22.51■■□□□ 1.19
PDE6D-201ENST00000287600 ADAMTS2O95450 1211 aa22.51■■□□□ 1.19
PDE6D-201ENST00000287600 COL22A1Q8NFW1 1626 aaPredicted RBP22.5■■□□□ 1.19
PDE6D-201ENST00000287600 UPF1Q92900 1129 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDE6D-201ENST00000287600 STK26Q9P289 416 aa22.5■■□□□ 1.19
PDE6D-201ENST00000287600 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
PDE6D-201ENST00000287600 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
PDE6D-201ENST00000287600 RGS12O14924 1447 aa22.48■■□□□ 1.19
PDE6D-201ENST00000287600 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
PDE6D-201ENST00000287600 NGLY1Q96IV0 654 aa22.48■■□□□ 1.19
PDE6D-201ENST00000287600 QTRT2Q9H974 415 aaKnown RBP22.47■■□□□ 1.19
PDE6D-201ENST00000287600 NPHP3Q7Z494 1330 aa22.47■■□□□ 1.19
PDE6D-201ENST00000287600 RBM6P78332 1123 aaKnown RBP22.46■■□□□ 1.19
PDE6D-201ENST00000287600 TMEM132EQ6IEE7 984 aa22.45■■□□□ 1.18
PDE6D-201ENST00000287600 WAPLQ7Z5K2 1190 aa22.45■■□□□ 1.18
PDE6D-201ENST00000287600 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
PDE6D-201ENST00000287600 PXDNQ92626 1479 aa22.45■■□□□ 1.18
PDE6D-201ENST00000287600 FMN2Q9NZ56 1722 aa22.45■■□□□ 1.18
PDE6D-201ENST00000287600 YTHDC2Q9H6S0 1430 aaKnown RBP22.44■■□□□ 1.18
PDE6D-201ENST00000287600 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
PDE6D-201ENST00000287600 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
PDE6D-201ENST00000287600 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
PDE6D-201ENST00000287600 MYOM2P54296 1465 aa22.42■■□□□ 1.18
PDE6D-201ENST00000287600 MARF1Q9Y4F3 1742 aaKnown RBP22.42■■□□□ 1.18
PDE6D-201ENST00000287600 FOXO3O43524 673 aa22.41■■□□□ 1.18
PDE6D-201ENST00000287600 HRCP23327 699 aa22.41■■□□□ 1.18
PDE6D-201ENST00000287600 XPCQ01831 940 aaPredicted RBP22.41■■□□□ 1.18
PDE6D-201ENST00000287600 USP21Q9UK80 565 aa22.41■■□□□ 1.18
PDE6D-201ENST00000287600 NRXN1Q9ULB1 1477 aa22.39■■□□□ 1.17
PDE6D-201ENST00000287600 TRPC5Q9UL62 973 aaPredicted RBP22.38■■□□□ 1.17
PDE6D-201ENST00000287600 FNBP4Q8N3X1 1017 aaPredicted RBP22.36■■□□□ 1.17
PDE6D-201ENST00000287600 ATRNO75882 1429 aa22.35■■□□□ 1.17
PDE6D-201ENST00000287600 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
PDE6D-201ENST00000287600 C14orf93Q9H972 538 aaKnown RBP22.34■■□□□ 1.17
PDE6D-201ENST00000287600 RGPD8O14715 1765 aaPredicted RBP22.34■■□□□ 1.17
PDE6D-201ENST00000287600 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.17
PDE6D-201ENST00000287600 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
PDE6D-201ENST00000287600 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
PDE6D-201ENST00000287600 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.31■■□□□ 1.16
PDE6D-201ENST00000287600 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
PDE6D-201ENST00000287600 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
PDE6D-201ENST00000287600 USP32Q8NFA0 1604 aa22.29■■□□□ 1.16
PDE6D-201ENST00000287600 SAFB2Q14151 953 aaKnown RBP eCLIP22.29■■□□□ 1.16
PDE6D-201ENST00000287600 DLC1Q96QB1 1528 aa22.29■■□□□ 1.16
PDE6D-201ENST00000287600 SPATA31A3Q5VYP0 1347 aa22.29■■□□□ 1.16
PDE6D-201ENST00000287600 PRAM1Q96QH2 718 aa22.28■■□□□ 1.16
PDE6D-201ENST00000287600 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
PDE6D-201ENST00000287600 KRT28Q7Z3Y7 464 aa22.27■■□□□ 1.16
PDE6D-201ENST00000287600 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
PDE6D-201ENST00000287600 CNKSR2Q8WXI2 1034 aa22.26■■□□□ 1.15
PDE6D-201ENST00000287600 PHF8Q9UPP1 1060 aa22.26■■□□□ 1.15
PDE6D-201ENST00000287600 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
PDE6D-201ENST00000287600 POGKQ9P215 609 aa22.25■■□□□ 1.15
PDE6D-201ENST00000287600 ABCA3Q99758 1704 aa22.24■■□□□ 1.15
PDE6D-201ENST00000287600 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
PDE6D-201ENST00000287600 PSME1Q06323 249 aa22.23■■□□□ 1.15
PDE6D-201ENST00000287600 SLIT2O94813 1529 aa22.22■■□□□ 1.15
PDE6D-201ENST00000287600 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
PDE6D-201ENST00000287600 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
PDE6D-201ENST00000287600 PLEKHG5O94827 1062 aa22.21■■□□□ 1.15
PDE6D-201ENST00000287600 GJD4Q96KN9 370 aaPredicted RBP22.21■■□□□ 1.15
PDE6D-201ENST00000287600 GLI3P10071 1580 aa22.21■■□□□ 1.15
PDE6D-201ENST00000287600 SBNO1A3KN83 1393 aa22.2■■□□□ 1.14
PDE6D-201ENST00000287600 LMOD2Q6P5Q4 547 aa22.19■■□□□ 1.14
PDE6D-201ENST00000287600 UNC5CLQ8IV45 518 aa22.19■■□□□ 1.14
PDE6D-201ENST00000287600 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
PDE6D-201ENST00000287600 ARHGEF10O15013 1369 aa22.19■■□□□ 1.14
PDE6D-201ENST00000287600 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
PDE6D-201ENST00000287600 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
PDE6D-201ENST00000287600 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
PDE6D-201ENST00000287600 PMFBP1Q8TBY8 1022 aa22.17■■□□□ 1.14
PDE6D-201ENST00000287600 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
PDE6D-201ENST00000287600 EIF3AQ14152 1382 aaKnown RBP22.16■■□□□ 1.14
PDE6D-201ENST00000287600 CABLES1Q8TDN4 633 aa22.16■■□□□ 1.14
PDE6D-201ENST00000287600 HIRIP3Q9BW71 556 aaPredicted RBP22.16■■□□□ 1.14
PDE6D-201ENST00000287600 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
PDE6D-201ENST00000287600 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
PDE6D-201ENST00000287600 MINK1Q8N4C8 1332 aaPredicted RBP22.15■■□□□ 1.14
PDE6D-201ENST00000287600 ARHGEF28Q8N1W1 1705 aaKnown RBP22.14■■□□□ 1.13
PDE6D-201ENST00000287600 BRWD3Q6RI45 1802 aa22.13■■□□□ 1.13
PDE6D-201ENST00000287600 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
PDE6D-201ENST00000287600 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
PDE6D-201ENST00000287600 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
PDE6D-201ENST00000287600 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
PDE6D-201ENST00000287600 STAC3Q96MF2 364 aa22.1■■□□□ 1.13
PDE6D-201ENST00000287600 CCDC9Q9Y3X0 531 aaKnown RBP22.1■■□□□ 1.13
PDE6D-201ENST00000287600 PRR36Q9H6K5 1346 aa22.09■■□□□ 1.13
PDE6D-201ENST00000287600 VPS72Q15906 364 aa22.09■■□□□ 1.13
PDE6D-201ENST00000287600 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
PDE6D-201ENST00000287600 EP400Q96L91 3159 aa22.08■■□□□ 1.13
PDE6D-201ENST00000287600 WASLO00401 505 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms