RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 NAIPQ13075 1403 aa16.3■□□□□ 0.2
NSMCE2-201ENST00000287437 PRAG1Q86YV5 1406 aa16.3■□□□□ 0.2
NSMCE2-201ENST00000287437 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
NSMCE2-201ENST00000287437 ATRNO75882 1429 aa16.29■□□□□ 0.2
NSMCE2-201ENST00000287437 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
NSMCE2-201ENST00000287437 MYOM2P54296 1465 aa16.28■□□□□ 0.2
NSMCE2-201ENST00000287437 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
NSMCE2-201ENST00000287437 EP400Q96L91 3159 aa16.27■□□□□ 0.19
NSMCE2-201ENST00000287437 RPGRIP1LQ68CZ1 1315 aa16.26■□□□□ 0.19
NSMCE2-201ENST00000287437 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
NSMCE2-201ENST00000287437 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
NSMCE2-201ENST00000287437 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
NSMCE2-201ENST00000287437 BCL9LQ86UU0 1499 aa16.25■□□□□ 0.19
NSMCE2-201ENST00000287437 PXDNQ92626 1479 aa16.25■□□□□ 0.19
NSMCE2-201ENST00000287437 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
NSMCE2-201ENST00000287437 PPLO60437 1756 aa16.24■□□□□ 0.19
NSMCE2-201ENST00000287437 FOXO3O43524 673 aa16.24■□□□□ 0.19
NSMCE2-201ENST00000287437 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
NSMCE2-201ENST00000287437 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
NSMCE2-201ENST00000287437 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
NSMCE2-201ENST00000287437 ADGRF5Q8IZF2 1346 aa16.2■□□□□ 0.18
NSMCE2-201ENST00000287437 WAPLQ7Z5K2 1190 aa16.2■□□□□ 0.18
NSMCE2-201ENST00000287437 GJD4Q96KN9 370 aaPredicted RBP16.2■□□□□ 0.18
NSMCE2-201ENST00000287437 STK26Q9P289 416 aa16.2■□□□□ 0.18
NSMCE2-201ENST00000287437 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
NSMCE2-201ENST00000287437 LRPPRCP42704 1394 aaKnown RBP16.18■□□□□ 0.18
NSMCE2-201ENST00000287437 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
NSMCE2-201ENST00000287437 TECPR2O15040 1411 aa16.18■□□□□ 0.18
NSMCE2-201ENST00000287437 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
NSMCE2-201ENST00000287437 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
NSMCE2-201ENST00000287437 GLI3P10071 1580 aa16.16■□□□□ 0.18
NSMCE2-201ENST00000287437 RALGAPBQ86X10 1494 aa16.16■□□□□ 0.18
NSMCE2-201ENST00000287437 SLIT2O94813 1529 aa16.15■□□□□ 0.18
NSMCE2-201ENST00000287437 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
NSMCE2-201ENST00000287437 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
NSMCE2-201ENST00000287437 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.15■□□□□ 0.18
NSMCE2-201ENST00000287437 SPATA31A3Q5VYP0 1347 aa16.15■□□□□ 0.18
NSMCE2-201ENST00000287437 ABCC11Q96J66 1382 aa16.14■□□□□ 0.17
NSMCE2-201ENST00000287437 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
NSMCE2-201ENST00000287437 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
NSMCE2-201ENST00000287437 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
NSMCE2-201ENST00000287437 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
NSMCE2-201ENST00000287437 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
NSMCE2-201ENST00000287437 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
NSMCE2-201ENST00000287437 KNDC1Q76NI1 1749 aa16.12■□□□□ 0.17
NSMCE2-201ENST00000287437 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
NSMCE2-201ENST00000287437 DEFB132Q7Z7B7 95 aa16.1■□□□□ 0.17
NSMCE2-201ENST00000287437 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
NSMCE2-201ENST00000287437 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
NSMCE2-201ENST00000287437 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
NSMCE2-201ENST00000287437 SEPT12Q8IYM1 358 aa16.09■□□□□ 0.17
NSMCE2-201ENST00000287437 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
NSMCE2-201ENST00000287437 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
NSMCE2-201ENST00000287437 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.16
NSMCE2-201ENST00000287437 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
NSMCE2-201ENST00000287437 VPS72Q15906 364 aa16.06■□□□□ 0.16
NSMCE2-201ENST00000287437 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
NSMCE2-201ENST00000287437 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
NSMCE2-201ENST00000287437 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
NSMCE2-201ENST00000287437 PSME1Q06323 249 aa16.05■□□□□ 0.16
NSMCE2-201ENST00000287437 LMOD2Q6P5Q4 547 aa16.05■□□□□ 0.16
NSMCE2-201ENST00000287437 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
NSMCE2-201ENST00000287437 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
NSMCE2-201ENST00000287437 RGPD8O14715 1765 aaPredicted RBP16.04■□□□□ 0.16
NSMCE2-201ENST00000287437 NRXN1Q9ULB1 1477 aa16.03■□□□□ 0.16
NSMCE2-201ENST00000287437 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
NSMCE2-201ENST00000287437 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
NSMCE2-201ENST00000287437 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
NSMCE2-201ENST00000287437 C14orf93Q9H972 538 aaKnown RBP16.03■□□□□ 0.16
NSMCE2-201ENST00000287437 ARHGEF10O15013 1369 aa16.02■□□□□ 0.16
NSMCE2-201ENST00000287437 ONECUT3O60422 494 aaPredicted RBP16.02■□□□□ 0.16
NSMCE2-201ENST00000287437 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
NSMCE2-201ENST00000287437 NWD2Q9ULI1 1742 aa16.02■□□□□ 0.15
NSMCE2-201ENST00000287437 A0A0G2JS52 829 aa16.01■□□□□ 0.15
NSMCE2-201ENST00000287437 FAM83GA6ND36 823 aa16.01■□□□□ 0.15
NSMCE2-201ENST00000287437 MYT1Q01538 1121 aa16.01■□□□□ 0.15
NSMCE2-201ENST00000287437 PRAM1Q96QH2 718 aa16.01■□□□□ 0.15
NSMCE2-201ENST00000287437 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
NSMCE2-201ENST00000287437 PMFBP1Q8TBY8 1022 aa16■□□□□ 0.15
NSMCE2-201ENST00000287437 LRP5O75197 1615 aa15.98■□□□□ 0.15
NSMCE2-201ENST00000287437 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
NSMCE2-201ENST00000287437 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
NSMCE2-201ENST00000287437 ANKARQ7Z5J8 1434 aa15.97■□□□□ 0.15
NSMCE2-201ENST00000287437 BTG4Q9NY30 223 aa15.97■□□□□ 0.15
NSMCE2-201ENST00000287437 POGKQ9P215 609 aa15.97■□□□□ 0.15
NSMCE2-201ENST00000287437 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
NSMCE2-201ENST00000287437 BAG6P46379 1132 aa15.96■□□□□ 0.15
NSMCE2-201ENST00000287437 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
NSMCE2-201ENST00000287437 DLC1Q96QB1 1528 aa15.95■□□□□ 0.14
NSMCE2-201ENST00000287437 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
NSMCE2-201ENST00000287437 ADGRB2O60241 1585 aa15.95■□□□□ 0.14
NSMCE2-201ENST00000287437 TRPM3Q9HCF6 1732 aaPredicted RBP15.94■□□□□ 0.14
NSMCE2-201ENST00000287437 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
NSMCE2-201ENST00000287437 HRCP23327 699 aa15.93■□□□□ 0.14
NSMCE2-201ENST00000287437 PRR36Q9H6K5 1346 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms