RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
CSF1R-201ENST00000286301 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
CSF1R-201ENST00000286301 PTPRTO14522 1441 aa12.03□□□□□ -0.48
CSF1R-201ENST00000286301 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
CSF1R-201ENST00000286301 NUTM2GQ5VZR2 741 aa12.03□□□□□ -0.48
CSF1R-201ENST00000286301 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
CSF1R-201ENST00000286301 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
CSF1R-201ENST00000286301 COG3Q96JB2 828 aa12.03□□□□□ -0.48
CSF1R-201ENST00000286301 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
CSF1R-201ENST00000286301 TRPM2O94759 1503 aa12.02□□□□□ -0.48
CSF1R-201ENST00000286301 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.48
CSF1R-201ENST00000286301 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.48
CSF1R-201ENST00000286301 ARXQ96QS3 562 aa12.02□□□□□ -0.48
CSF1R-201ENST00000286301 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
CSF1R-201ENST00000286301 LTV1Q96GA3 475 aaPredicted RBP12.02□□□□□ -0.49
CSF1R-201ENST00000286301 RIPK4P57078 832 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 NEO1Q92859 1461 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 E9PCH4 1651 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
CSF1R-201ENST00000286301 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
CSF1R-201ENST00000286301 RRS1Q15050 365 aaKnown RBP12□□□□□ -0.49
CSF1R-201ENST00000286301 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
CSF1R-201ENST00000286301 ARAP3Q8WWN8 1544 aa12□□□□□ -0.49
CSF1R-201ENST00000286301 TRPM1Q7Z4N2 1603 aa11.99□□□□□ -0.49
CSF1R-201ENST00000286301 ASXL1Q8IXJ9 1541 aa11.98□□□□□ -0.49
CSF1R-201ENST00000286301 NME9Q86XW9 330 aa11.98□□□□□ -0.49
CSF1R-201ENST00000286301 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
CSF1R-201ENST00000286301 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
CSF1R-201ENST00000286301 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
CSF1R-201ENST00000286301 PKNOX2Q96KN3 472 aa11.98□□□□□ -0.49
CSF1R-201ENST00000286301 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
CSF1R-201ENST00000286301 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 SPINK5Q9NQ38 1064 aaPredicted RBP11.97□□□□□ -0.49
CSF1R-201ENST00000286301 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 PLEKHH1Q9ULM0 1364 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 ITPRIPQ8IWB1 547 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 TET3O43151 1660 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
CSF1R-201ENST00000286301 FYB1O15117 783 aa11.96□□□□□ -0.49
CSF1R-201ENST00000286301 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
CSF1R-201ENST00000286301 ATAD2Q6PL18 1390 aa11.96□□□□□ -0.49
CSF1R-201ENST00000286301 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.5
CSF1R-201ENST00000286301 AMPHP49418 695 aa11.96□□□□□ -0.5
CSF1R-201ENST00000286301 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
CSF1R-201ENST00000286301 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
CSF1R-201ENST00000286301 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
CSF1R-201ENST00000286301 SPHKAPQ2M3C7 1700 aa11.95□□□□□ -0.5
CSF1R-201ENST00000286301 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
CSF1R-201ENST00000286301 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
CSF1R-201ENST00000286301 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
CSF1R-201ENST00000286301 CEP152O94986 1710 aa11.94□□□□□ -0.5
CSF1R-201ENST00000286301 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
CSF1R-201ENST00000286301 ERVK-7P63135 1459 aa11.94□□□□□ -0.5
CSF1R-201ENST00000286301 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
CSF1R-201ENST00000286301 ABCC3O15438 1527 aa11.93□□□□□ -0.5
CSF1R-201ENST00000286301 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
CSF1R-201ENST00000286301 TNRQ92752 1358 aa11.92□□□□□ -0.5
CSF1R-201ENST00000286301 KIF1BO60333 1816 aa11.92□□□□□ -0.5
CSF1R-201ENST00000286301 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
CSF1R-201ENST00000286301 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
CSF1R-201ENST00000286301 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
CSF1R-201ENST00000286301 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
CSF1R-201ENST00000286301 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
CSF1R-201ENST00000286301 PDE4AP27815 886 aa11.92□□□□□ -0.5
CSF1R-201ENST00000286301 ANKRD36BQ8N2N9 1353 aa11.91□□□□□ -0.5
CSF1R-201ENST00000286301 NLRP6P59044 892 aa11.91□□□□□ -0.5
CSF1R-201ENST00000286301 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
CSF1R-201ENST00000286301 CFAP74Q9C0B2 1584 aa11.91□□□□□ -0.5
CSF1R-201ENST00000286301 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
CSF1R-201ENST00000286301 PIK3C2GO75747 1445 aa11.9□□□□□ -0.5
CSF1R-201ENST00000286301 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
CSF1R-201ENST00000286301 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
CSF1R-201ENST00000286301 MADDQ8WXG6 1647 aa11.9□□□□□ -0.5
CSF1R-201ENST00000286301 APBB1O00213 710 aa11.9□□□□□ -0.5
CSF1R-201ENST00000286301 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
CSF1R-201ENST00000286301 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
CSF1R-201ENST00000286301 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
CSF1R-201ENST00000286301 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
CSF1R-201ENST00000286301 ZKSCAN2Q63HK3 967 aa11.89□□□□□ -0.51
CSF1R-201ENST00000286301 UPF2Q9HAU5 1272 aaKnown RBP11.89□□□□□ -0.51
CSF1R-201ENST00000286301 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
CSF1R-201ENST00000286301 MYOM2P54296 1465 aa11.88□□□□□ -0.51
CSF1R-201ENST00000286301 LTKP29376 864 aa11.88□□□□□ -0.51
CSF1R-201ENST00000286301 MAP3K4Q9Y6R4 1608 aa11.88□□□□□ -0.51
CSF1R-201ENST00000286301 NGEFQ8N5V2 710 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
CSF1R-201ENST00000286301 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
CSF1R-201ENST00000286301 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
CSF1R-201ENST00000286301 PSME1Q06323 249 aa11.86□□□□□ -0.51
CSF1R-201ENST00000286301 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms