RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MINK1Q8N4C8 1332 aaPredicted RBP30.56■■■□□ 2.48
PDLIM3-203ENST00000284771 NKTRP30414 1462 aaKnown RBP30.55■■■□□ 2.48
PDLIM3-203ENST00000284771 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
PDLIM3-203ENST00000284771 PROSER2Q86WR7 435 aaPredicted RBP30.52■■■□□ 2.48
PDLIM3-203ENST00000284771 TMF1P82094 1093 aa30.49■■■□□ 2.47
PDLIM3-203ENST00000284771 TULP4Q9NRJ4 1543 aa30.48■■■□□ 2.47
PDLIM3-203ENST00000284771 WASHC2AQ641Q2 1341 aa30.48■■■□□ 2.47
PDLIM3-203ENST00000284771 TMEM94Q12767 1356 aa30.46■■■□□ 2.47
PDLIM3-203ENST00000284771 KIF7Q2M1P5 1343 aa30.46■■■□□ 2.47
PDLIM3-203ENST00000284771 LRRC7Q96NW7 1537 aa30.45■■■□□ 2.47
PDLIM3-203ENST00000284771 NALCNQ8IZF0 1738 aa30.44■■■□□ 2.46
PDLIM3-203ENST00000284771 SLC24A1O60721 1099 aa30.44■■■□□ 2.46
PDLIM3-203ENST00000284771 XIRP1Q702N8 1843 aaKnown RBP30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 LTBP4Q8N2S1 1624 aa30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 EVC2Q86UK5 1308 aa30.43■■■□□ 2.46
PDLIM3-203ENST00000284771 WASLO00401 505 aaPredicted RBP30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 CDK19Q9BWU1 502 aa30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
PDLIM3-203ENST00000284771 CCDC7Q96M83 1385 aa30.41■■■□□ 2.46
PDLIM3-203ENST00000284771 ADGRL3Q9HAR2 1447 aa30.41■■■□□ 2.46
PDLIM3-203ENST00000284771 CABP2Q9NPB3 220 aa30.4■■■□□ 2.46
PDLIM3-203ENST00000284771 NCOA3Q9Y6Q9 1424 aa30.38■■■□□ 2.45
PDLIM3-203ENST00000284771 C14orf37Q86TY3 774 aa30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 POLR3GLQ9BT43 218 aa30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 SRPK2P78362 688 aaKnown RBP30.36■■■□□ 2.45
PDLIM3-203ENST00000284771 C19orf44Q9H6X5 657 aa30.35■■■□□ 2.45
PDLIM3-203ENST00000284771 CDCA8Q53HL2 280 aa30.33■■■□□ 2.45
PDLIM3-203ENST00000284771 PUS7Q96PZ0 661 aaKnown RBP30.33■■■□□ 2.45
PDLIM3-203ENST00000284771 NUTM2FA1L443 756 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 CDC42BPGQ6DT37 1551 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 PRR36Q9H6K5 1346 aa30.32■■■□□ 2.44
PDLIM3-203ENST00000284771 USP32Q8NFA0 1604 aa30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 NUDT16Q96DE0 195 aaKnown RBP30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 FMN2Q9NZ56 1722 aa30.28■■■□□ 2.44
PDLIM3-203ENST00000284771 ATP7BP35670 1465 aa30.27■■■□□ 2.44
PDLIM3-203ENST00000284771 DDX10Q13206 875 aaKnown RBP30.26■■■□□ 2.43
PDLIM3-203ENST00000284771 MYOM1P52179 1685 aa30.26■■■□□ 2.43
PDLIM3-203ENST00000284771 RGPD8O14715 1765 aaPredicted RBP30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 MSH6P52701 1360 aa30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 SLC12A5Q9H2X9 1139 aa30.25■■■□□ 2.43
PDLIM3-203ENST00000284771 ATAD2Q6PL18 1390 aa30.24■■■□□ 2.43
PDLIM3-203ENST00000284771 DCCP43146 1447 aa30.23■■■□□ 2.43
PDLIM3-203ENST00000284771 CCDC61Q9Y6R9 512 aa30.23■■■□□ 2.43
PDLIM3-203ENST00000284771 ATF3P18847 181 aa30.21■■■□□ 2.43
PDLIM3-203ENST00000284771 CABP1Q9NZU7 370 aa30.21■■■□□ 2.43
PDLIM3-203ENST00000284771 TMC1Q8TDI8 760 aa30.2■■■□□ 2.43
PDLIM3-203ENST00000284771 CADPS2Q86UW7 1296 aa30.2■■■□□ 2.42
PDLIM3-203ENST00000284771 ANKARQ7Z5J8 1434 aa30.19■■■□□ 2.42
PDLIM3-203ENST00000284771 MST1RQ04912 1400 aa30.18■■■□□ 2.42
PDLIM3-203ENST00000284771 TOPAZ1Q8N9V7 1692 aa30.18■■■□□ 2.42
PDLIM3-203ENST00000284771 PPIP5K1Q6PFW1 1433 aa30.17■■■□□ 2.42
PDLIM3-203ENST00000284771 PANK3Q9H999 370 aa30.15■■■□□ 2.42
PDLIM3-203ENST00000284771 C1orf167Q5SNV9 1468 aa30.15■■■□□ 2.42
PDLIM3-203ENST00000284771 CD163L1Q9NR16 1453 aa30.14■■■□□ 2.42
PDLIM3-203ENST00000284771 ORAI2Q96SN7 254 aa30.14■■■□□ 2.41
PDLIM3-203ENST00000284771 PLEKHG3A1L390 1219 aa30.13■■■□□ 2.41
PDLIM3-203ENST00000284771 NINLQ9Y2I6 1382 aa30.13■■■□□ 2.41
PDLIM3-203ENST00000284771 PMFBP1Q8TBY8 1022 aa30.12■■■□□ 2.41
PDLIM3-203ENST00000284771 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
PDLIM3-203ENST00000284771 SLAIN2Q9P270 581 aa30.11■■■□□ 2.41
PDLIM3-203ENST00000284771 ITSN1Q15811 1721 aa30.1■■■□□ 2.41
PDLIM3-203ENST00000284771 CARD14Q9BXL6 1004 aa30.1■■■□□ 2.41
PDLIM3-203ENST00000284771 A0A1W2PP64 1363 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 PER1O15534 1290 aaPredicted RBP30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 CPSF1Q10570 1443 aaKnown RBP30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 ANKRD36BQ8N2N9 1353 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 ACEP12821 1306 aa30.08■■■□□ 2.41
PDLIM3-203ENST00000284771 PHF8Q9UPP1 1060 aa30.07■■■□□ 2.4
PDLIM3-203ENST00000284771 CERKQ8TCT0 537 aa30.06■■■□□ 2.4
PDLIM3-203ENST00000284771 POLR3AO14802 1390 aaPredicted RBP30.04■■■□□ 2.4
PDLIM3-203ENST00000284771 TERF2IPQ9NYB0 399 aa30.04■■■□□ 2.4
PDLIM3-203ENST00000284771 AKAP12Q02952 1782 aa30.01■■■□□ 2.4
PDLIM3-203ENST00000284771 BRINP3Q76B58 766 aa30.01■■■□□ 2.39
PDLIM3-203ENST00000284771 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.39
PDLIM3-203ENST00000284771 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
PDLIM3-203ENST00000284771 IQSEC2Q5JU85 1478 aa30■■■□□ 2.39
PDLIM3-203ENST00000284771 FOXO3O43524 673 aa29.99■■■□□ 2.39
PDLIM3-203ENST00000284771 KTN1Q86UP2 1357 aaKnown RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 ZNF692Q9BU19 519 aaPredicted RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 DIEXFQ68CQ4 756 aaKnown RBP29.98■■■□□ 2.39
PDLIM3-203ENST00000284771 DDX17Q92841 729 aaKnown RBP29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 NSD3Q9BZ95 1437 aa29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 MON2Q7Z3U7 1717 aa29.96■■■□□ 2.39
PDLIM3-203ENST00000284771 USP6P35125 1406 aa29.95■■■□□ 2.39
PDLIM3-203ENST00000284771 KIF1AQ12756 1690 aa29.95■■■□□ 2.39
PDLIM3-203ENST00000284771 KNSTRNQ9Y448 316 aa29.94■■■□□ 2.38
PDLIM3-203ENST00000284771 SSH2Q76I76 1423 aa29.93■■■□□ 2.38
PDLIM3-203ENST00000284771 TOM1O60784 492 aa29.93■■■□□ 2.38
PDLIM3-203ENST00000284771 AMER1Q5JTC6 1135 aaPredicted RBP29.92■■■□□ 2.38
PDLIM3-203ENST00000284771 XPCQ01831 940 aaPredicted RBP29.91■■■□□ 2.38
PDLIM3-203ENST00000284771 UBAP1LF5GYI3 381 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 PSME1Q06323 249 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 EDC4Q6P2E9 1401 aaKnown RBP29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 NRKQ7Z2Y5 1582 aa29.9■■■□□ 2.38
PDLIM3-203ENST00000284771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.89■■■□□ 2.38
PDLIM3-203ENST00000284771 ROBO1Q9Y6N7 1651 aa29.89■■■□□ 2.37
PDLIM3-203ENST00000284771 TTC21BQ7Z4L5 1316 aa29.88■■■□□ 2.37
PDLIM3-203ENST00000284771 FYB1O15117 783 aa29.86■■■□□ 2.37
PDLIM3-203ENST00000284771 CNGB1Q14028 1251 aaPredicted RBP29.86■■■□□ 2.37
PDLIM3-203ENST00000284771 KRT28Q7Z3Y7 464 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms