RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 SAMD1Q6SPF0 538 aaPredicted RBP4.77□□□□□ -1.65
RAB3C-201ENST00000282878 IL27Q8NEV9 243 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 RALBP1Q15311 655 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 FOXD4L5Q5VV16 416 aaPredicted RBP4.77□□□□□ -1.65
RAB3C-201ENST00000282878 FOXD4L4Q8WXT5 416 aaPredicted RBP4.77□□□□□ -1.65
RAB3C-201ENST00000282878 ANP32EQ9BTT0 268 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 MIS18AQ9NYP9 233 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 TCP11L2Q8N4U5 519 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 CD109Q6YHK3 1445 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 FAM83GA6ND36 823 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 C1orf115Q9H7X2 142 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 TICAM2Q86XR7 235 aa4.77□□□□□ -1.65
RAB3C-201ENST00000282878 ERICH6BQ5W0A0 696 aa4.76□□□□□ -1.65
RAB3C-201ENST00000282878 KANK1Q14678 1352 aa4.76□□□□□ -1.65
RAB3C-201ENST00000282878 IGHDP01880 384 aa4.76□□□□□ -1.65
RAB3C-201ENST00000282878 ADGRL1O94910 1474 aa4.76□□□□□ -1.65
RAB3C-201ENST00000282878 PATL2C9JE40 543 aaKnown RBP4.76□□□□□ -1.65
RAB3C-201ENST00000282878 EXOSC9Q06265 439 aaKnown RBP4.76□□□□□ -1.65
RAB3C-201ENST00000282878 GOLGA2Q08379 1002 aa4.76□□□□□ -1.65
RAB3C-201ENST00000282878 PRAG1Q86YV5 1406 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 CDK19Q9BWU1 502 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 USHBP1Q8N6Y0 703 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 FANCAO15360 1455 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 RAPGEF6Q8TEU7 1601 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 DTNBO60941 627 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 RLBP1P12271 317 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 MTMR7Q9Y216 660 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 MAGI2Q86UL8 1455 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 IGSF3O75054 1194 aa4.75□□□□□ -1.65
RAB3C-201ENST00000282878 APPP05067 770 aa4.74□□□□□ -1.65
RAB3C-201ENST00000282878 VASPP50552 380 aaPredicted RBP4.74□□□□□ -1.65
RAB3C-201ENST00000282878 FOXO3O43524 673 aa4.74□□□□□ -1.65
RAB3C-201ENST00000282878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.74□□□□□ -1.65
RAB3C-201ENST00000282878 GORABQ5T7V8 394 aa4.74□□□□□ -1.65
RAB3C-201ENST00000282878 PDE4AP27815 886 aa4.74□□□□□ -1.65
RAB3C-201ENST00000282878 C14orf93Q9H972 538 aaKnown RBP4.74□□□□□ -1.65
RAB3C-201ENST00000282878 DUSP27Q5VZP5 1158 aa4.74□□□□□ -1.65
RAB3C-201ENST00000282878 FAM177A1Q8N128 213 aaPredicted RBP4.74□□□□□ -1.65
RAB3C-201ENST00000282878 ATAD2Q6PL18 1390 aa4.73□□□□□ -1.65
RAB3C-201ENST00000282878 FAM135AQ9P2D6 1515 aa4.73□□□□□ -1.65
RAB3C-201ENST00000282878 TSPYL6Q8N831 410 aa4.73□□□□□ -1.65
RAB3C-201ENST00000282878 DDX17Q92841 729 aaKnown RBP4.73□□□□□ -1.65
RAB3C-201ENST00000282878 NSD3Q9BZ95 1437 aa4.73□□□□□ -1.65
RAB3C-201ENST00000282878 PHACTR3Q96KR7 559 aa4.73□□□□□ -1.65
RAB3C-201ENST00000282878 SEC24BO95487 1268 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 FGD1P98174 961 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 GPATCH11Q8N954 259 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 BCL11BQ9C0K0 894 aaPredicted RBP4.72□□□□□ -1.65
RAB3C-201ENST00000282878 CLASP1Q7Z460 1538 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 PRKAR2BP31323 418 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 PLCD3Q8N3E9 789 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 RIPK4P57078 832 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 ABCA8O94911 1581 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 SLFN5Q08AF3 891 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 FYB1O15117 783 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 WWC1Q8IX03 1113 aa4.72□□□□□ -1.65
RAB3C-201ENST00000282878 SUPT6HQ7KZ85 1726 aaKnown RBP4.72□□□□□ -1.65
RAB3C-201ENST00000282878 VGFO15240 615 aaPredicted RBP4.71□□□□□ -1.65
RAB3C-201ENST00000282878 MYH16Q9H6N6 1097 aa4.71□□□□□ -1.65
RAB3C-201ENST00000282878 ITPRIPQ8IWB1 547 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 CWC22Q9HCG8 908 aaKnown RBP4.71□□□□□ -1.66
RAB3C-201ENST00000282878 PBRM1Q86U86 1689 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 UHRF1BP1Q6BDS2 1440 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 LTKP29376 864 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 MCM10Q7L590 875 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 SAMD9LQ8IVG5 1584 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 ADGRL2O95490 1459 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 CFAP43Q8NDM7 1665 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 BRD4O60885 1362 aaPredicted RBP4.71□□□□□ -1.66
RAB3C-201ENST00000282878 TMX4Q9H1E5 349 aaPredicted RBP4.71□□□□□ -1.66
RAB3C-201ENST00000282878 TTC37Q6PGP7 1564 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 PARD3Q8TEW0 1356 aa4.71□□□□□ -1.66
RAB3C-201ENST00000282878 PRDM15P57071 1507 aaPredicted RBP4.7□□□□□ -1.66
RAB3C-201ENST00000282878 ATXN8OSP0DMR3 200 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 BRPF1P55201 1214 aaPredicted RBP4.7□□□□□ -1.66
RAB3C-201ENST00000282878 SMG6Q86US8 1419 aaKnown RBP4.7□□□□□ -1.66
RAB3C-201ENST00000282878 MAPK8IP3Q9UPT6 1336 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 ABCC2Q92887 1545 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 CERS3Q8IU89 383 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 SLKQ9H2G2 1235 aaPredicted RBP4.7□□□□□ -1.66
RAB3C-201ENST00000282878 ATP10AO60312 1499 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 SPOCK2Q92563 424 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 SMC4Q9NTJ3 1288 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 UHRF1BP1LA0JNW5 1464 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 WDR7Q9Y4E6 1490 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 ANXA1P04083 346 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 NPATQ14207 1427 aa4.7□□□□□ -1.66
RAB3C-201ENST00000282878 MFAP1P55081 439 aaKnown RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 NOP58Q9Y2X3 529 aaKnown RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 HSPA2P54652 639 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 RALGAPBQ86X10 1494 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 DIAPH1O60610 1272 aaKnown RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 HSP90AB2PQ58FF8 381 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 ANKRD13AQ8IZ07 590 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 PCDHB15Q9Y5E8 787 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 CDCA8Q53HL2 280 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 ZFP91Q96JP5 570 aaPredicted RBP4.69□□□□□ -1.66
RAB3C-201ENST00000282878 KDM4AO75164 1064 aa4.69□□□□□ -1.66
RAB3C-201ENST00000282878 HDGFL2Q7Z4V5 671 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms