RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
PDCD4-201ENST00000280154 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
PDCD4-201ENST00000280154 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-201ENST00000280154 CPS1P31327 1500 aa13□□□□□ -0.33
PDCD4-201ENST00000280154 ITGAEP38570 1179 aa13□□□□□ -0.33
PDCD4-201ENST00000280154 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
PDCD4-201ENST00000280154 SECISBP2LQ93073 1101 aaKnown RBP12.99□□□□□ -0.33
PDCD4-201ENST00000280154 ADGRB2O60241 1585 aa12.98□□□□□ -0.33
PDCD4-201ENST00000280154 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
PDCD4-201ENST00000280154 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
PDCD4-201ENST00000280154 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
PDCD4-201ENST00000280154 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
PDCD4-201ENST00000280154 TECPR2O15040 1411 aa12.97□□□□□ -0.33
PDCD4-201ENST00000280154 ALKQ9UM73 1620 aa12.97□□□□□ -0.33
PDCD4-201ENST00000280154 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
PDCD4-201ENST00000280154 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
PDCD4-201ENST00000280154 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
PDCD4-201ENST00000280154 TMEM2Q9UHN6 1383 aa12.93□□□□□ -0.34
PDCD4-201ENST00000280154 PSMD1Q99460 953 aa12.93□□□□□ -0.34
PDCD4-201ENST00000280154 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
PDCD4-201ENST00000280154 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
PDCD4-201ENST00000280154 XIRP1Q702N8 1843 aaKnown RBP12.92□□□□□ -0.34
PDCD4-201ENST00000280154 ADAMTS13Q76LX8 1427 aa12.91□□□□□ -0.34
PDCD4-201ENST00000280154 CERS3Q8IU89 383 aa12.91□□□□□ -0.34
PDCD4-201ENST00000280154 SCAF11Q99590 1463 aaKnown RBP12.9□□□□□ -0.34
PDCD4-201ENST00000280154 GGT6Q6P531 493 aa12.9□□□□□ -0.34
PDCD4-201ENST00000280154 TOPAZ1Q8N9V7 1692 aa12.9□□□□□ -0.34
PDCD4-201ENST00000280154 RAD21O60216 631 aa12.89□□□□□ -0.35
PDCD4-201ENST00000280154 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
PDCD4-201ENST00000280154 PIK3R4Q99570 1358 aa12.89□□□□□ -0.35
PDCD4-201ENST00000280154 NBR1Q14596 966 aa12.89□□□□□ -0.35
PDCD4-201ENST00000280154 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
PDCD4-201ENST00000280154 ADRA2BP18089 450 aa12.88□□□□□ -0.35
PDCD4-201ENST00000280154 IDI1Q13907 227 aa12.88□□□□□ -0.35
PDCD4-201ENST00000280154 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
PDCD4-201ENST00000280154 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
PDCD4-201ENST00000280154 PPP1R15AO75807 674 aaPredicted RBP12.87□□□□□ -0.35
PDCD4-201ENST00000280154 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
PDCD4-201ENST00000280154 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
PDCD4-201ENST00000280154 MYOM1P52179 1685 aa12.86□□□□□ -0.35
PDCD4-201ENST00000280154 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
PDCD4-201ENST00000280154 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
PDCD4-201ENST00000280154 PTCH1Q13635 1447 aa12.86□□□□□ -0.35
PDCD4-201ENST00000280154 KDM4AO75164 1064 aa12.85□□□□□ -0.35
PDCD4-201ENST00000280154 FOXD1Q16676 465 aa12.83□□□□□ -0.35
PDCD4-201ENST00000280154 SIRT1Q96EB6 747 aa12.83□□□□□ -0.35
PDCD4-201ENST00000280154 FAM135BQ49AJ0 1406 aa12.83□□□□□ -0.36
PDCD4-201ENST00000280154 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
PDCD4-201ENST00000280154 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
PDCD4-201ENST00000280154 TICAM2Q86XR7 235 aa12.83□□□□□ -0.36
PDCD4-201ENST00000280154 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
PDCD4-201ENST00000280154 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
PDCD4-201ENST00000280154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■□□□ 14.5
PDCD4-201ENST00000280154 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
PDCD4-201ENST00000280154 ZBTB7CA1YPR0 619 aa12.82□□□□□ -0.36
PDCD4-201ENST00000280154 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 NALCNQ8IZF0 1738 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 SOX12O15370 315 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 SIN3AQ96ST3 1273 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 FMN2Q9NZ56 1722 aa12.81□□□□□ -0.36
PDCD4-201ENST00000280154 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.81□□□□□ -0.36
PDCD4-201ENST00000280154 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
PDCD4-201ENST00000280154 PRDM16Q9HAZ2 1276 aa12.8□□□□□ -0.36
PDCD4-201ENST00000280154 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
PDCD4-201ENST00000280154 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
PDCD4-201ENST00000280154 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDCD4-201ENST00000280154 PLCD4Q9BRC7 762 aa12.79□□□□□ -0.36
PDCD4-201ENST00000280154 KCTD17Q8N5Z5 321 aa12.79□□□□□ -0.36
PDCD4-201ENST00000280154 LTBP4Q8N2S1 1624 aa12.78□□□□□ -0.36
PDCD4-201ENST00000280154 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
PDCD4-201ENST00000280154 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
PDCD4-201ENST00000280154 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
PDCD4-201ENST00000280154 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
PDCD4-201ENST00000280154 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
PDCD4-201ENST00000280154 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.36
PDCD4-201ENST00000280154 MTMR7Q9Y216 660 aa12.77□□□□□ -0.36
PDCD4-201ENST00000280154 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
PDCD4-201ENST00000280154 ITSN1Q15811 1721 aa12.77□□□□□ -0.37
PDCD4-201ENST00000280154 LRPPRCP42704 1394 aaKnown RBP12.77□□□□□ -0.37
PDCD4-201ENST00000280154 NRKQ7Z2Y5 1582 aa12.76□□□□□ -0.37
PDCD4-201ENST00000280154 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
PDCD4-201ENST00000280154 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
PDCD4-201ENST00000280154 CCER1Q8TC90 406 aaPredicted RBP12.76□□□□□ -0.37
PDCD4-201ENST00000280154 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
PDCD4-201ENST00000280154 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
PDCD4-201ENST00000280154 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
PDCD4-201ENST00000280154 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
PDCD4-201ENST00000280154 VGFO15240 615 aaPredicted RBP12.74□□□□□ -0.37
PDCD4-201ENST00000280154 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
PDCD4-201ENST00000280154 ESF1Q9H501 851 aaKnown RBP12.74□□□□□ -0.37
PDCD4-201ENST00000280154 TULP4Q9NRJ4 1543 aa12.74□□□□□ -0.37
PDCD4-201ENST00000280154 YTHDC2Q9H6S0 1430 aaKnown RBP12.73□□□□□ -0.37
PDCD4-201ENST00000280154 PTMSP20962 102 aa12.73□□□□□ -0.37
PDCD4-201ENST00000280154 TBX22Q9Y458 520 aa12.73□□□□□ -0.37
PDCD4-201ENST00000280154 CEBPAP49715 358 aaPredicted RBP12.73□□□□□ -0.37
PDCD4-201ENST00000280154 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
PDCD4-201ENST00000280154 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms