RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
CTDSP1-201ENST00000273062 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
CTDSP1-201ENST00000273062 GGT6Q6P531 493 aa20■□□□□ 0.79
CTDSP1-201ENST00000273062 STAC3Q96MF2 364 aa19.99■□□□□ 0.79
CTDSP1-201ENST00000273062 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
CTDSP1-201ENST00000273062 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
CTDSP1-201ENST00000273062 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
CTDSP1-201ENST00000273062 PANK3Q9H999 370 aa19.97■□□□□ 0.79
CTDSP1-201ENST00000273062 NAP1L2Q9ULW6 460 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-201ENST00000273062 OFD1O75665 1012 aa19.97■□□□□ 0.79
CTDSP1-201ENST00000273062 TMF1P82094 1093 aa19.97■□□□□ 0.79
CTDSP1-201ENST00000273062 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
CTDSP1-201ENST00000273062 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
CTDSP1-201ENST00000273062 R3HCC1Q9Y3T6 440 aaKnown RBP19.95■□□□□ 0.78
CTDSP1-201ENST00000273062 CFAP70Q5T0N1 1121 aa19.94■□□□□ 0.78
CTDSP1-201ENST00000273062 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
CTDSP1-201ENST00000273062 ABCA6Q8N139 1617 aa19.94■□□□□ 0.78
CTDSP1-201ENST00000273062 IQGAP1P46940 1657 aa19.94■□□□□ 0.78
CTDSP1-201ENST00000273062 RALBP1Q15311 655 aa19.94■□□□□ 0.78
CTDSP1-201ENST00000273062 MROH2AA6NES4 1674 aa19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 CFAP74Q9C0B2 1584 aa19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 MLH3Q9UHC1 1453 aa19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 IGHDP01880 384 aa19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 CHGAP10645 457 aaKnown RBP19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 CFAP65Q6ZU64 1925 aaKnown RBP19.93■□□□□ 0.78
CTDSP1-201ENST00000273062 NPATQ14207 1427 aa19.91■□□□□ 0.78
CTDSP1-201ENST00000273062 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
CTDSP1-201ENST00000273062 MAP7D2Q96T17 732 aa19.9■□□□□ 0.78
CTDSP1-201ENST00000273062 DMTNQ08495 405 aa19.89■□□□□ 0.78
CTDSP1-201ENST00000273062 LMTK2Q8IWU2 1503 aa19.89■□□□□ 0.77
CTDSP1-201ENST00000273062 ZSCAN20P17040 1043 aaPredicted RBP19.89■□□□□ 0.77
CTDSP1-201ENST00000273062 ZSCAN30Q86W11 494 aa19.89■□□□□ 0.77
CTDSP1-201ENST00000273062 UQCRHLA0A096LP55 91 aa19.88■□□□□ 0.77
CTDSP1-201ENST00000273062 UQCRHP07919 91 aa19.88■□□□□ 0.77
CTDSP1-201ENST00000273062 CANXP27824 592 aaKnown RBP19.88■□□□□ 0.77
CTDSP1-201ENST00000273062 NLRP13Q86W25 1043 aa19.88■□□□□ 0.77
CTDSP1-201ENST00000273062 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-201ENST00000273062 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
CTDSP1-201ENST00000273062 KIF1BO60333 1816 aa19.87■□□□□ 0.77
CTDSP1-201ENST00000273062 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
CTDSP1-201ENST00000273062 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
CTDSP1-201ENST00000273062 NOS1P29475 1434 aa19.86■□□□□ 0.77
CTDSP1-201ENST00000273062 NEO1Q92859 1461 aa19.85■□□□□ 0.77
CTDSP1-201ENST00000273062 YEATS2Q9ULM3 1422 aa19.84■□□□□ 0.77
CTDSP1-201ENST00000273062 ABCC3O15438 1527 aa19.84■□□□□ 0.77
CTDSP1-201ENST00000273062 MYOM2P54296 1465 aa19.84■□□□□ 0.77
CTDSP1-201ENST00000273062 PPP4R3BQ5MIZ7 849 aa19.84■□□□□ 0.77
CTDSP1-201ENST00000273062 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
CTDSP1-201ENST00000273062 DIP2CQ9Y2E4 1556 aa19.83■□□□□ 0.77
CTDSP1-201ENST00000273062 CHMP5Q9NZZ3 219 aa19.83■□□□□ 0.77
CTDSP1-201ENST00000273062 XPCQ01831 940 aaPredicted RBP19.83■□□□□ 0.76
CTDSP1-201ENST00000273062 UTP14CQ5TAP6 766 aaKnown RBP19.83■□□□□ 0.76
CTDSP1-201ENST00000273062 ADGRB3O60242 1522 aa19.83■□□□□ 0.76
CTDSP1-201ENST00000273062 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 VGLL3A8MV65 326 aa19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 TERF1P54274 439 aa19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 NEURL4Q96JN8 1562 aa19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 MSNP26038 577 aaKnown RBP19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 DUSP27Q5VZP5 1158 aa19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
CTDSP1-201ENST00000273062 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
CTDSP1-201ENST00000273062 TMEM51Q9NW97 253 aa19.81■□□□□ 0.76
CTDSP1-201ENST00000273062 SIGLEC1Q9BZZ2 1709 aa19.8■□□□□ 0.76
CTDSP1-201ENST00000273062 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
CTDSP1-201ENST00000273062 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
CTDSP1-201ENST00000273062 PPP1R9BQ96SB3 815 aa19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 ZNF692Q9BU19 519 aaPredicted RBP19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 KIAA1210Q9ULL0 1709 aa19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 DDX11L8A8MPP1 907 aa19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 CCDC173Q0VFZ6 552 aa19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 EIF3AQ14152 1382 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-201ENST00000273062 NRXN1Q9ULB1 1477 aa19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 JARID2Q92833 1246 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 RIMBP3CA6NJZ7 1639 aa19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 RIMBP3BA6NNM3 1639 aa19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 CAMSAP1Q5T5Y3 1602 aa19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 RIMBP3Q9UFD9 1639 aa19.78■□□□□ 0.76
CTDSP1-201ENST00000273062 FAM69CQ0P6D2 419 aa19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 TMEM132EQ6IEE7 984 aa19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 MYOM1P52179 1685 aa19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 NASPP49321 788 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 PLEKHH1Q9ULM0 1364 aa19.77■□□□□ 0.76
CTDSP1-201ENST00000273062 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.76■□□□□ 0.75
CTDSP1-201ENST00000273062 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
CTDSP1-201ENST00000273062 PLCD3Q8N3E9 789 aa19.76■□□□□ 0.75
CTDSP1-201ENST00000273062 ERVK-7P63135 1459 aa19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 BCAR3O75815 825 aa19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 CCDC94Q9BW85 323 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 TRAK1Q9UPV9 953 aa19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 SYNMO15061 1565 aa19.75■□□□□ 0.75
CTDSP1-201ENST00000273062 ANP32BQ92688 251 aaKnown RBP19.74■□□□□ 0.75
CTDSP1-201ENST00000273062 ZNF830Q96NB3 372 aaPredicted RBP19.74■□□□□ 0.75
CTDSP1-201ENST00000273062 ZMYM4Q5VZL5 1548 aa19.74■□□□□ 0.75
CTDSP1-201ENST00000273062 PAXIP1Q6ZW49 1069 aaPredicted RBP19.74■□□□□ 0.75
CTDSP1-201ENST00000273062 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
CTDSP1-201ENST00000273062 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
CTDSP1-201ENST00000273062 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms