RNA–Protein interactions for RNA: ENST00000266674.9

LGR5-201, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR5, Length 4,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-201ENST00000266674 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
LGR5-201ENST00000266674 RBM10P98175 930 aaKnown RBP16.81■□□□□ 0.28
LGR5-201ENST00000266674 GPS2Q13227 327 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 HOMER1Q86YM7 354 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 NECTIN2Q92692 538 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
LGR5-201ENST00000266674 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
LGR5-201ENST00000266674 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
LGR5-201ENST00000266674 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
LGR5-201ENST00000266674 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
LGR5-201ENST00000266674 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
LGR5-201ENST00000266674 MCM2P49736 904 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
LGR5-201ENST00000266674 TEFQ10587 303 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
LGR5-201ENST00000266674 EHBP1L1Q8N3D4 1523 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 SLFN5Q08AF3 891 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 TSPY26PQ9H489 355 aa16.79■□□□□ 0.28
LGR5-201ENST00000266674 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
LGR5-201ENST00000266674 RRP9O43818 475 aaKnown RBP16.78■□□□□ 0.28
LGR5-201ENST00000266674 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
LGR5-201ENST00000266674 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
LGR5-201ENST00000266674 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
LGR5-201ENST00000266674 TEX35Q5T0J7 233 aa16.78■□□□□ 0.28
LGR5-201ENST00000266674 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
LGR5-201ENST00000266674 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
LGR5-201ENST00000266674 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
LGR5-201ENST00000266674 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
LGR5-201ENST00000266674 CABP2Q9NPB3 220 aa16.77■□□□□ 0.28
LGR5-201ENST00000266674 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
LGR5-201ENST00000266674 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.27
LGR5-201ENST00000266674 CPLX2Q6PUV4 134 aaKnown RBP16.77■□□□□ 0.27
LGR5-201ENST00000266674 CWC22Q9HCG8 908 aaKnown RBP16.77■□□□□ 0.27
LGR5-201ENST00000266674 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
LGR5-201ENST00000266674 CT47B1P0C2W7 299 aaPredicted RBP16.76■□□□□ 0.27
LGR5-201ENST00000266674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
LGR5-201ENST00000266674 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
LGR5-201ENST00000266674 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
LGR5-201ENST00000266674 TPD52L1Q16890 204 aaPredicted RBP16.76■□□□□ 0.27
LGR5-201ENST00000266674 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
LGR5-201ENST00000266674 LETM1O95202 739 aaPredicted RBP16.76■□□□□ 0.27
LGR5-201ENST00000266674 TPM1P09493 284 aa16.76■□□□□ 0.27
LGR5-201ENST00000266674 SCAPERQ9BY12 1400 aa16.75■□□□□ 0.27
LGR5-201ENST00000266674 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
LGR5-201ENST00000266674 ERC2O15083 957 aa16.75■□□□□ 0.27
LGR5-201ENST00000266674 NEXNQ0ZGT2 675 aa16.75■□□□□ 0.27
LGR5-201ENST00000266674 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
LGR5-201ENST00000266674 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
LGR5-201ENST00000266674 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
LGR5-201ENST00000266674 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
LGR5-201ENST00000266674 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
LGR5-201ENST00000266674 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
LGR5-201ENST00000266674 CPLX1O14810 134 aa16.73■□□□□ 0.27
LGR5-201ENST00000266674 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
LGR5-201ENST00000266674 CHD1LQ86WJ1 897 aa16.73■□□□□ 0.27
LGR5-201ENST00000266674 ARGLU1Q9NWB6 273 aaPredicted RBP16.73■□□□□ 0.27
LGR5-201ENST00000266674 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
LGR5-201ENST00000266674 TRIM5Q9C035 493 aa16.73■□□□□ 0.27
LGR5-201ENST00000266674 NCOA1Q15788 1441 aa16.72■□□□□ 0.27
LGR5-201ENST00000266674 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
LGR5-201ENST00000266674 MNS1Q8NEH6 495 aa16.72■□□□□ 0.27
LGR5-201ENST00000266674 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
LGR5-201ENST00000266674 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 FIBPO43427 364 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 DAPK1P53355 1430 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 GNAI3P08754 354 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
LGR5-201ENST00000266674 ZSCAN30Q86W11 494 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 FBXW7Q969H0 707 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 C9orf84Q5VXU9 1444 aa16.71■□□□□ 0.27
LGR5-201ENST00000266674 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.26
LGR5-201ENST00000266674 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
LGR5-201ENST00000266674 CLSTN1O94985 981 aa16.69■□□□□ 0.26
LGR5-201ENST00000266674 TRIM29Q14134 588 aa16.69■□□□□ 0.26
LGR5-201ENST00000266674 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
LGR5-201ENST00000266674 UQCRHP07919 91 aa16.69■□□□□ 0.26
LGR5-201ENST00000266674 CNTROBQ8N137 903 aa16.68■□□□□ 0.26
LGR5-201ENST00000266674 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.26
LGR5-201ENST00000266674 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
LGR5-201ENST00000266674 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
LGR5-201ENST00000266674 MPNDQ8N594 471 aa16.68■□□□□ 0.26
LGR5-201ENST00000266674 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
LGR5-201ENST00000266674 PDCP20941 246 aa16.68■□□□□ 0.26
LGR5-201ENST00000266674 SURF6O75683 361 aaKnown RBP16.68■□□□□ 0.26
LGR5-201ENST00000266674 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
LGR5-201ENST00000266674 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
LGR5-201ENST00000266674 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
LGR5-201ENST00000266674 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
LGR5-201ENST00000266674 PSMA5P28066 241 aa16.67■□□□□ 0.26
LGR5-201ENST00000266674 FOSBP53539 338 aa16.66■□□□□ 0.26
LGR5-201ENST00000266674 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
LGR5-201ENST00000266674 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
LGR5-201ENST00000266674 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
LGR5-201ENST00000266674 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
LGR5-201ENST00000266674 HOOK1Q9UJC3 728 aaKnown RBP16.66■□□□□ 0.26
LGR5-201ENST00000266674 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
LGR5-201ENST00000266674 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms