RNA–Protein interactions for RNA: ENST00000265362.8

SEMA3A-201, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3A, Length 8,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-201ENST00000265362 MAGI3Q5TCQ9 1506 aa7.36□□□□□ -1.23
SEMA3A-201ENST00000265362 SPHKAPQ2M3C7 1700 aa7.36□□□□□ -1.23
SEMA3A-201ENST00000265362 CLUAP1Q96AJ1 413 aa7.36□□□□□ -1.23
SEMA3A-201ENST00000265362 ARAP3Q8WWN8 1544 aa7.36□□□□□ -1.23
SEMA3A-201ENST00000265362 ST18O60284 1047 aa7.36□□□□□ -1.23
SEMA3A-201ENST00000265362 SYAP1Q96A49 352 aaPredicted RBP7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 ZCCHC11Q5TAX3 1644 aaKnown RBP7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 NKTRP30414 1462 aaKnown RBP7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 TET3O43151 1660 aa7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 REC8O95072 547 aa7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 NUTM2DQ5VT03 806 aaPredicted RBP7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 EXOC6Q8TAG9 804 aa7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 IQGAP3Q86VI3 1631 aa7.35□□□□□ -1.23
SEMA3A-201ENST00000265362 FGD1P98174 961 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 TCP11L2Q8N4U5 519 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 NPC1L1Q9UHC9 1359 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 SOX12O15370 315 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 NSD3Q9BZ95 1437 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 CSPP1Q1MSJ5 1256 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 PRAM1Q96QH2 718 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 HTATSF1O43719 755 aaKnown RBP7.34□□□□□ -1.23
SEMA3A-201ENST00000265362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 FCHSD2O94868 740 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 C1orf141Q5JVX7 400 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 TMEM132EQ6IEE7 984 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 NRDCO43847 1150 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 DDX11L8A8MPP1 907 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 RAPGEF3O95398 923 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 TEFQ10587 303 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 NEO1Q92859 1461 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 RRP7AQ9Y3A4 280 aaKnown RBP7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 KIF3AQ9Y496 699 aa7.33□□□□□ -1.24
SEMA3A-201ENST00000265362 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 GPRASP1Q5JY77 1395 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 PARD3Q8TEW0 1356 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 SAMD9LQ8IVG5 1584 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 PHF14O94880 888 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 PSME1Q06323 249 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 CABP2Q9NPB3 220 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 TSPOAP1O95153 1857 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 HSP90AB4PQ58FF6 505 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 CDK19Q9BWU1 502 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 DDX58O95786 925 aaKnown RBP7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 COG6Q9Y2V7 657 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 KDM5CP41229 1560 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 GOLGA6L6A8MZA4 724 aa7.32□□□□□ -1.24
SEMA3A-201ENST00000265362 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 GOLGA6L4A6NEF3 574 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 C11orf95C9JLR9 678 aaPredicted RBP7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 ATP6V1DQ9Y5K8 247 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 CEP152O94986 1710 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 PIK3C2GO75747 1445 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 CSB-PGBD3P0DP91 1061 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 PLIN1O60240 522 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 TXNDC2Q86VQ3 553 aa7.31□□□□□ -1.24
SEMA3A-201ENST00000265362 UNC13BO14795 1591 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 ABCC1P33527 1531 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 RUFY2Q8WXA3 655 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 NOS1P29475 1434 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 ANKRD45Q5TZF3 282 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 IL27Q8NEV9 243 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 TTC37Q6PGP7 1564 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 TRAPPC8Q9Y2L5 1435 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 ANKRD36BQ8N2N9 1353 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 SLFN5Q08AF3 891 aa7.3□□□□□ -1.24
SEMA3A-201ENST00000265362 PTMAP06454 111 aaKnown RBP7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 GGNBP2Q9H3C7 697 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 SLC4A10Q6U841 1118 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 HECW2Q9P2P5 1572 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 IL16Q14005 1332 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 SYNMO15061 1565 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 TRPM2O94759 1503 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 ZMYM4Q5VZL5 1548 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 GNAI3P08754 354 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 DEKP35659 375 aaKnown RBP7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 MFAP1P55081 439 aaKnown RBP7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 MBD5Q9P267 1494 aa7.29□□□□□ -1.24
SEMA3A-201ENST00000265362 CCDC34Q96HJ3 373 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 ALDH1L2Q3SY69 923 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 ATF7IPQ6VMQ6 1270 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 IDI1Q13907 227 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 CCDC30Q5VVM6 783 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 INTS3Q68E01 1043 aaKnown RBP7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 ARXQ96QS3 562 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 SPATA31E1Q6ZUB1 1445 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 LAMC1P11047 1609 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 A0A0G2JS52 829 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 TRPM1Q7Z4N2 1603 aa7.28□□□□□ -1.24
SEMA3A-201ENST00000265362 CCDC27Q2M243 656 aa7.27□□□□□ -1.24
SEMA3A-201ENST00000265362 BCL2L13Q9BXK5 485 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms