RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 RRP9O43818 475 aaKnown RBP21.02■□□□□ 0.96
SRF-201ENST00000265354 SYAP1Q96A49 352 aaPredicted RBP21.02■□□□□ 0.95
SRF-201ENST00000265354 RBM42Q9BTD8 480 aaKnown RBP21.02■□□□□ 0.95
SRF-201ENST00000265354 PARD3Q8TEW0 1356 aa21.01■□□□□ 0.95
SRF-201ENST00000265354 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
SRF-201ENST00000265354 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
SRF-201ENST00000265354 LMOD2Q6P5Q4 547 aa21.01■□□□□ 0.95
SRF-201ENST00000265354 CHD1LQ86WJ1 897 aa21.01■□□□□ 0.95
SRF-201ENST00000265354 NEK4P51957 841 aa21■□□□□ 0.95
SRF-201ENST00000265354 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
SRF-201ENST00000265354 KIF16BQ96L93 1317 aa21■□□□□ 0.95
SRF-201ENST00000265354 NKTRP30414 1462 aaKnown RBP21■□□□□ 0.95
SRF-201ENST00000265354 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.99■□□□□ 0.95
SRF-201ENST00000265354 THOC2Q8NI27 1593 aaKnown RBP20.99■□□□□ 0.95
SRF-201ENST00000265354 TRIM27P14373 513 aa20.99■□□□□ 0.95
SRF-201ENST00000265354 KDM2BQ8NHM5 1336 aa20.99■□□□□ 0.95
SRF-201ENST00000265354 K7ELQ4 463 aaPredicted RBP20.99■□□□□ 0.95
SRF-201ENST00000265354 FBLN1P23142 703 aa20.98■□□□□ 0.95
SRF-201ENST00000265354 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
SRF-201ENST00000265354 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
SRF-201ENST00000265354 CDC45O75419 566 aa20.98■□□□□ 0.95
SRF-201ENST00000265354 NUCB2P80303 420 aa20.98■□□□□ 0.95
SRF-201ENST00000265354 CAMSAP2Q08AD1 1489 aa20.97■□□□□ 0.95
SRF-201ENST00000265354 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
SRF-201ENST00000265354 HMMRO75330 724 aa20.97■□□□□ 0.95
SRF-201ENST00000265354 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
SRF-201ENST00000265354 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
SRF-201ENST00000265354 A0A0G2JS52 829 aa20.96■□□□□ 0.95
SRF-201ENST00000265354 WDR63Q8IWG1 891 aa20.96■□□□□ 0.95
SRF-201ENST00000265354 STK31Q9BXU1 1019 aa20.95■□□□□ 0.94
SRF-201ENST00000265354 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.94
SRF-201ENST00000265354 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
SRF-201ENST00000265354 ZNF428Q96B54 188 aa20.94■□□□□ 0.94
SRF-201ENST00000265354 REC8O95072 547 aa20.94■□□□□ 0.94
SRF-201ENST00000265354 PRDM10Q9NQV6 1147 aa20.94■□□□□ 0.94
SRF-201ENST00000265354 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
SRF-201ENST00000265354 INTS3Q68E01 1043 aaKnown RBP20.93■□□□□ 0.94
SRF-201ENST00000265354 CCDC173Q0VFZ6 552 aa20.93■□□□□ 0.94
SRF-201ENST00000265354 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
SRF-201ENST00000265354 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
SRF-201ENST00000265354 TMPOP42166 694 aaKnown RBP20.93■□□□□ 0.94
SRF-201ENST00000265354 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
SRF-201ENST00000265354 AAMPQ13685 434 aa20.92■□□□□ 0.94
SRF-201ENST00000265354 ZNF771Q7L3S4 317 aaPredicted RBP20.92■□□□□ 0.94
SRF-201ENST00000265354 ZNF592Q92610 1267 aa20.92■□□□□ 0.94
SRF-201ENST00000265354 SYCE3A1L190 88 aa20.92■□□□□ 0.94
SRF-201ENST00000265354 ZHX1Q9UKY1 873 aaPredicted RBP20.92■□□□□ 0.94
SRF-201ENST00000265354 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
SRF-201ENST00000265354 CCDC9Q9Y3X0 531 aaKnown RBP20.91■□□□□ 0.94
SRF-201ENST00000265354 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
SRF-201ENST00000265354 SMARCA5O60264 1052 aaPredicted RBP20.9■□□□□ 0.94
SRF-201ENST00000265354 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
SRF-201ENST00000265354 DCTN1Q14203 1278 aa20.89■□□□□ 0.94
SRF-201ENST00000265354 VGFO15240 615 aaPredicted RBP20.89■□□□□ 0.94
SRF-201ENST00000265354 TWISTNBQ3B726 338 aaPredicted RBP20.89■□□□□ 0.94
SRF-201ENST00000265354 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 ZSCAN30Q86W11 494 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 API5Q9BZZ5 524 aaKnown RBP20.89■□□□□ 0.93
SRF-201ENST00000265354 UQCRHLA0A096LP55 91 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 UQCRHP07919 91 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 CLCN1P35523 988 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 RBM27Q9P2N5 1060 aaKnown RBP20.89■□□□□ 0.93
SRF-201ENST00000265354 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.93
SRF-201ENST00000265354 HAP1P54257 671 aaPredicted RBP20.88■□□□□ 0.93
SRF-201ENST00000265354 VPS37CA5D8V6 355 aaPredicted RBP20.88■□□□□ 0.93
SRF-201ENST00000265354 TPM2P07951 284 aa20.88■□□□□ 0.93
SRF-201ENST00000265354 GDPD2Q9HCC8 539 aa20.87■□□□□ 0.93
SRF-201ENST00000265354 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
SRF-201ENST00000265354 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
SRF-201ENST00000265354 SPC24Q8NBT2 197 aa20.86■□□□□ 0.93
SRF-201ENST00000265354 FBXW7Q969H0 707 aa20.86■□□□□ 0.93
SRF-201ENST00000265354 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
SRF-201ENST00000265354 GNAI1P63096 354 aa20.85■□□□□ 0.93
SRF-201ENST00000265354 FKBP5Q13451 457 aaPredicted RBP20.85■□□□□ 0.93
SRF-201ENST00000265354 EIF2S2P20042 333 aaKnown RBP20.85■□□□□ 0.93
SRF-201ENST00000265354 FIBPO43427 364 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 KDM6BO15054 1643 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 PHF14O94880 888 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 RABEP1Q15276 862 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 LARP6Q9BRS8 491 aaKnown RBP20.84■□□□□ 0.93
SRF-201ENST00000265354 TBC1D9Q6ZT07 1266 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 BBXQ8WY36 941 aaPredicted RBP20.84■□□□□ 0.93
SRF-201ENST00000265354 CABP1Q9NZU7 370 aa20.84■□□□□ 0.93
SRF-201ENST00000265354 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.93
SRF-201ENST00000265354 MAP4K4O95819 1239 aaPredicted RBP20.83■□□□□ 0.92
SRF-201ENST00000265354 LMOD3Q0VAK6 560 aa20.83■□□□□ 0.92
SRF-201ENST00000265354 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
SRF-201ENST00000265354 RALGAPBQ86X10 1494 aa20.82■□□□□ 0.92
SRF-201ENST00000265354 COG3Q96JB2 828 aa20.82■□□□□ 0.92
SRF-201ENST00000265354 PZPP20742 1482 aa20.82■□□□□ 0.92
SRF-201ENST00000265354 GPRASP1Q5JY77 1395 aa20.81■□□□□ 0.92
SRF-201ENST00000265354 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
SRF-201ENST00000265354 GPATCH8Q9UKJ3 1502 aaKnown RBP20.81■□□□□ 0.92
SRF-201ENST00000265354 TSHZ3Q63HK5 1081 aa20.81■□□□□ 0.92
SRF-201ENST00000265354 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
SRF-201ENST00000265354 CSPP1Q1MSJ5 1256 aa20.81■□□□□ 0.92
SRF-201ENST00000265354 BAG4O95429 457 aaKnown RBP20.8■□□□□ 0.92
SRF-201ENST00000265354 FOSBP53539 338 aa20.8■□□□□ 0.92
SRF-201ENST00000265354 CIZ1Q9ULV3 898 aaPredicted RBP20.8■□□□□ 0.92
SRF-201ENST00000265354 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms