RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
PDZRN3-201ENST00000263666 GOLGA6L22H0YM25 854 aa20.31■□□□□ 0.84
PDZRN3-201ENST00000263666 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
PDZRN3-201ENST00000263666 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
PDZRN3-201ENST00000263666 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
PDZRN3-201ENST00000263666 KDM5CP41229 1560 aa20.3■□□□□ 0.84
PDZRN3-201ENST00000263666 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
PDZRN3-201ENST00000263666 ARID3AQ99856 593 aa20.29■□□□□ 0.84
PDZRN3-201ENST00000263666 PLCH2O75038 1416 aa20.29■□□□□ 0.84
PDZRN3-201ENST00000263666 ITSN2Q9NZM3 1697 aa20.29■□□□□ 0.84
PDZRN3-201ENST00000263666 TRAPPC8Q9Y2L5 1435 aa20.28■□□□□ 0.84
PDZRN3-201ENST00000263666 DDX19BQ9UMR2 479 aa20.28■□□□□ 0.84
PDZRN3-201ENST00000263666 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
PDZRN3-201ENST00000263666 PRKAR2BP31323 418 aa20.27■□□□□ 0.83
PDZRN3-201ENST00000263666 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 COL17A1Q9UMD9 1497 aaPredicted RBP20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 HAP1P54257 671 aaPredicted RBP20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 ADGRL2O95490 1459 aa20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 MVPQ14764 893 aaKnown RBP20.26■□□□□ 0.83
PDZRN3-201ENST00000263666 TMEM57Q8N5G2 664 aa20.25■□□□□ 0.83
PDZRN3-201ENST00000263666 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
PDZRN3-201ENST00000263666 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
PDZRN3-201ENST00000263666 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
PDZRN3-201ENST00000263666 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
PDZRN3-201ENST00000263666 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
PDZRN3-201ENST00000263666 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-201ENST00000263666 MBD5Q9P267 1494 aa20.22■□□□□ 0.83
PDZRN3-201ENST00000263666 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
PDZRN3-201ENST00000263666 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
PDZRN3-201ENST00000263666 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
PDZRN3-201ENST00000263666 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
PDZRN3-201ENST00000263666 MAGI2Q86UL8 1455 aa20.21■□□□□ 0.83
PDZRN3-201ENST00000263666 TMPOP42166 694 aaKnown RBP20.2■□□□□ 0.82
PDZRN3-201ENST00000263666 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
PDZRN3-201ENST00000263666 NOS1P29475 1434 aa20.2■□□□□ 0.82
PDZRN3-201ENST00000263666 TRAK2O60296 914 aa20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 TRIM27P14373 513 aa20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 A0A0G2JS52 829 aa20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
PDZRN3-201ENST00000263666 FBXO31Q5XUX0 539 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-201ENST00000263666 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
PDZRN3-201ENST00000263666 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
PDZRN3-201ENST00000263666 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
PDZRN3-201ENST00000263666 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-201ENST00000263666 CASC1Q6TDU7 716 aa20.17■□□□□ 0.82
PDZRN3-201ENST00000263666 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
PDZRN3-201ENST00000263666 PLA2R1Q13018 1463 aa20.16■□□□□ 0.82
PDZRN3-201ENST00000263666 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
PDZRN3-201ENST00000263666 PTMAP06454 111 aaKnown RBP20.15■□□□□ 0.82
PDZRN3-201ENST00000263666 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
PDZRN3-201ENST00000263666 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
PDZRN3-201ENST00000263666 ASXL1Q8IXJ9 1541 aa20.15■□□□□ 0.82
PDZRN3-201ENST00000263666 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
PDZRN3-201ENST00000263666 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 BLMP54132 1417 aaPredicted RBP20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 MCM4P33991 863 aa20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 TRIM6-TRIM34B2RNG4 842 aa20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 CDK19Q9BWU1 502 aa20.13■□□□□ 0.81
PDZRN3-201ENST00000263666 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
PDZRN3-201ENST00000263666 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
PDZRN3-201ENST00000263666 IDI1Q13907 227 aa20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 KIF16BQ96L93 1317 aa20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 RTF1Q92541 710 aaKnown RBP20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
PDZRN3-201ENST00000263666 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
PDZRN3-201ENST00000263666 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
PDZRN3-201ENST00000263666 COG3Q96JB2 828 aa20.09■□□□□ 0.81
PDZRN3-201ENST00000263666 EMILIN1Q9Y6C2 1016 aa20.09■□□□□ 0.81
PDZRN3-201ENST00000263666 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
PDZRN3-201ENST00000263666 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
PDZRN3-201ENST00000263666 DNTTIP2Q5QJE6 756 aaKnown RBP20.08■□□□□ 0.81
PDZRN3-201ENST00000263666 RILPL2Q969X0 211 aa20.08■□□□□ 0.81
PDZRN3-201ENST00000263666 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.81
PDZRN3-201ENST00000263666 DDX11L8A8MPP1 907 aa20.08■□□□□ 0.8
PDZRN3-201ENST00000263666 MIS18AQ9NYP9 233 aa20.08■□□□□ 0.8
PDZRN3-201ENST00000263666 NUTM2GQ5VZR2 741 aa20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 FAM83GA6ND36 823 aa20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 OS9Q13438 667 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
PDZRN3-201ENST00000263666 CHD1O14646 1710 aa20.06■□□□□ 0.8
PDZRN3-201ENST00000263666 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
PDZRN3-201ENST00000263666 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
PDZRN3-201ENST00000263666 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
PDZRN3-201ENST00000263666 MSNP26038 577 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-201ENST00000263666 C14orf93Q9H972 538 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-201ENST00000263666 GLIPR1L2Q4G1C9 344 aa20.04■□□□□ 0.8
PDZRN3-201ENST00000263666 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
PDZRN3-201ENST00000263666 MPNDQ8N594 471 aa20.03■□□□□ 0.8
PDZRN3-201ENST00000263666 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
PDZRN3-201ENST00000263666 SMARCA5O60264 1052 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms