RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 C1orf167Q5SNV9 1468 aa26.63■■□□□ 1.85
COPE-201ENST00000262812 L3MBTL2Q969R5 705 aa26.63■■□□□ 1.85
COPE-201ENST00000262812 PHF23Q9BUL5 403 aaPredicted RBP26.61■■□□□ 1.85
COPE-201ENST00000262812 PHLPP1O60346 1717 aa26.61■■□□□ 1.85
COPE-201ENST00000262812 LAMC1P11047 1609 aa26.61■■□□□ 1.85
COPE-201ENST00000262812 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
COPE-201ENST00000262812 MED1Q15648 1581 aaPredicted RBP26.59■■□□□ 1.85
COPE-201ENST00000262812 JCADQ9P266 1359 aa26.58■■□□□ 1.85
COPE-201ENST00000262812 ILDR2Q71H61 639 aa26.58■■□□□ 1.85
COPE-201ENST00000262812 ADGRB1O14514 1584 aa26.58■■□□□ 1.85
COPE-201ENST00000262812 NBPF1Q3BBV0 1214 aa26.56■■□□□ 1.84
COPE-201ENST00000262812 KNDC1Q76NI1 1749 aa26.55■■□□□ 1.84
COPE-201ENST00000262812 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
COPE-201ENST00000262812 HIRIP3Q9BW71 556 aaPredicted RBP26.54■■□□□ 1.84
COPE-201ENST00000262812 LRRC59Q96AG4 307 aaKnown RBP26.53■■□□□ 1.84
COPE-201ENST00000262812 MINK1Q8N4C8 1332 aaPredicted RBP26.53■■□□□ 1.84
COPE-201ENST00000262812 COL16A1Q07092 1604 aaPredicted RBP26.53■■□□□ 1.84
COPE-201ENST00000262812 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
COPE-201ENST00000262812 CDC42BPGQ6DT37 1551 aa26.51■■□□□ 1.83
COPE-201ENST00000262812 DLC1Q96QB1 1528 aa26.5■■□□□ 1.83
COPE-201ENST00000262812 FOXO3O43524 673 aa26.5■■□□□ 1.83
COPE-201ENST00000262812 NUTM2BA6NNL0 878 aaPredicted RBP26.49■■□□□ 1.83
COPE-201ENST00000262812 NUTM2EB1AL46 878 aaPredicted RBP26.49■■□□□ 1.83
COPE-201ENST00000262812 NUTM2AQ8IVF1 878 aaPredicted RBP26.49■■□□□ 1.83
COPE-201ENST00000262812 XPCQ01831 940 aaPredicted RBP26.48■■□□□ 1.83
COPE-201ENST00000262812 SPATA31A6Q5VVP1 1343 aa26.45■■□□□ 1.83
COPE-201ENST00000262812 MEX3CQ5U5Q3 659 aaKnown RBP26.45■■□□□ 1.82
COPE-201ENST00000262812 SOS2Q07890 1332 aaPredicted RBP26.44■■□□□ 1.82
COPE-201ENST00000262812 NPHP3Q7Z494 1330 aa26.43■■□□□ 1.82
COPE-201ENST00000262812 RGS17Q9UGC6 210 aaPredicted RBP26.43■■□□□ 1.82
COPE-201ENST00000262812 PHF8Q9UPP1 1060 aa26.42■■□□□ 1.82
COPE-201ENST00000262812 NHSL1Q5SYE7 1610 aa26.42■■□□□ 1.82
COPE-201ENST00000262812 WASLO00401 505 aaPredicted RBP26.41■■□□□ 1.82
COPE-201ENST00000262812 TONSLQ96HA7 1378 aa26.4■■□□□ 1.82
COPE-201ENST00000262812 NBPF8Q3BBV2 869 aa26.39■■□□□ 1.82
COPE-201ENST00000262812 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
COPE-201ENST00000262812 PNPLA6Q8IY17 1366 aa26.38■■□□□ 1.81
COPE-201ENST00000262812 FMN2Q9NZ56 1722 aa26.38■■□□□ 1.81
COPE-201ENST00000262812 KRT28Q7Z3Y7 464 aa26.37■■□□□ 1.81
COPE-201ENST00000262812 LRP6O75581 1613 aa26.36■■□□□ 1.81
COPE-201ENST00000262812 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
COPE-201ENST00000262812 PSME1Q06323 249 aa26.35■■□□□ 1.81
COPE-201ENST00000262812 CDK19Q9BWU1 502 aa26.35■■□□□ 1.81
COPE-201ENST00000262812 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
COPE-201ENST00000262812 ROCK2O75116 1388 aaKnown RBP26.33■■□□□ 1.81
COPE-201ENST00000262812 SHPRHQ149N8 1683 aa26.33■■□□□ 1.81
COPE-201ENST00000262812 CENPJQ9HC77 1338 aaPredicted RBP26.33■■□□□ 1.81
COPE-201ENST00000262812 ADAMTS2O95450 1211 aa26.32■■□□□ 1.8
COPE-201ENST00000262812 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
COPE-201ENST00000262812 ANKARQ7Z5J8 1434 aa26.31■■□□□ 1.8
COPE-201ENST00000262812 PXDNQ92626 1479 aa26.31■■□□□ 1.8
COPE-201ENST00000262812 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
COPE-201ENST00000262812 EIF3AQ14152 1382 aaKnown RBP26.31■■□□□ 1.8
COPE-201ENST00000262812 ARHGEF28Q8N1W1 1705 aaKnown RBP26.31■■□□□ 1.8
COPE-201ENST00000262812 ADGRB2O60241 1585 aa26.3■■□□□ 1.8
COPE-201ENST00000262812 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
COPE-201ENST00000262812 C8orf37Q96NL8 207 aa26.29■■□□□ 1.8
COPE-201ENST00000262812 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
COPE-201ENST00000262812 NGDNQ8NEJ9 315 aaKnown RBP26.27■■□□□ 1.8
COPE-201ENST00000262812 SPATA31A3Q5VYP0 1347 aa26.27■■□□□ 1.8
COPE-201ENST00000262812 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
COPE-201ENST00000262812 TULP4Q9NRJ4 1543 aa26.25■■□□□ 1.79
COPE-201ENST00000262812 SOCS7O14512 581 aa26.25■■□□□ 1.79
COPE-201ENST00000262812 SRPK2P78362 688 aaKnown RBP26.25■■□□□ 1.79
COPE-201ENST00000262812 CARD11Q9BXL7 1154 aa26.25■■□□□ 1.79
COPE-201ENST00000262812 USP32Q8NFA0 1604 aa26.25■■□□□ 1.79
COPE-201ENST00000262812 NGLY1Q96IV0 654 aa26.24■■□□□ 1.79
COPE-201ENST00000262812 CABP2Q9NPB3 220 aa26.24■■□□□ 1.79
COPE-201ENST00000262812 KIF1AQ12756 1690 aa26.24■■□□□ 1.79
COPE-201ENST00000262812 TRPM1Q7Z4N2 1603 aa26.24■■□□□ 1.79
COPE-201ENST00000262812 AFF2P51816 1311 aa26.23■■□□□ 1.79
COPE-201ENST00000262812 ZNF772Q68DY9 489 aaPredicted RBP26.23■■□□□ 1.79
COPE-201ENST00000262812 CCDC61Q9Y6R9 512 aa26.21■■□□□ 1.79
COPE-201ENST00000262812 GPRASP1Q5JY77 1395 aa26.2■■□□□ 1.79
COPE-201ENST00000262812 PAK3O75914 559 aaPredicted RBP26.19■■□□□ 1.78
COPE-201ENST00000262812 CABLES1Q8TDN4 633 aa26.19■■□□□ 1.78
COPE-201ENST00000262812 CCER1Q8TC90 406 aaPredicted RBP26.18■■□□□ 1.78
COPE-201ENST00000262812 SBNO1A3KN83 1393 aa26.18■■□□□ 1.78
COPE-201ENST00000262812 ATP7BP35670 1465 aa26.17■■□□□ 1.78
COPE-201ENST00000262812 HAP1P54257 671 aaPredicted RBP26.17■■□□□ 1.78
COPE-201ENST00000262812 TNS3Q68CZ2 1445 aa26.16■■□□□ 1.78
COPE-201ENST00000262812 ACEP12821 1306 aa26.15■■□□□ 1.78
COPE-201ENST00000262812 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
COPE-201ENST00000262812 PLEKHG3A1L390 1219 aa26.14■■□□□ 1.78
COPE-201ENST00000262812 QTRT2Q9H974 415 aaKnown RBP26.13■■□□□ 1.77
COPE-201ENST00000262812 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
COPE-201ENST00000262812 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
COPE-201ENST00000262812 COL22A1Q8NFW1 1626 aaPredicted RBP26.12■■□□□ 1.77
COPE-201ENST00000262812 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
COPE-201ENST00000262812 ARHGEF10O15013 1369 aa26.11■■□□□ 1.77
COPE-201ENST00000262812 RXRBP28702 533 aa26.11■■□□□ 1.77
COPE-201ENST00000262812 USP21Q9UK80 565 aa26.11■■□□□ 1.77
COPE-201ENST00000262812 QRICH2Q9H0J4 1663 aa26.11■■□□□ 1.77
COPE-201ENST00000262812 PPIP5K1Q6PFW1 1433 aa26.09■■□□□ 1.77
COPE-201ENST00000262812 FNBP4Q8N3X1 1017 aaPredicted RBP26.08■■□□□ 1.77
COPE-201ENST00000262812 NUTM2GQ5VZR2 741 aa26.07■■□□□ 1.76
COPE-201ENST00000262812 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
COPE-201ENST00000262812 TIMELESSQ9UNS1 1208 aa26.06■■□□□ 1.76
COPE-201ENST00000262812 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
COPE-201ENST00000262812 TRPC5Q9UL62 973 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms