RNA–Protein interactions for RNA: ENST00000261842.9

AP4E1-201, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP4E1, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-201ENST00000261842 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
AP4E1-201ENST00000261842 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
AP4E1-201ENST00000261842 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
AP4E1-201ENST00000261842 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
AP4E1-201ENST00000261842 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
AP4E1-201ENST00000261842 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
AP4E1-201ENST00000261842 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
AP4E1-201ENST00000261842 CHMP4CQ96CF2 233 aa18.34■□□□□ 0.53
AP4E1-201ENST00000261842 TPM3P06753 285 aa18.34■□□□□ 0.53
AP4E1-201ENST00000261842 NAP1L2Q9ULW6 460 aaPredicted RBP18.33■□□□□ 0.53
AP4E1-201ENST00000261842 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.53
AP4E1-201ENST00000261842 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.53
AP4E1-201ENST00000261842 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.52
AP4E1-201ENST00000261842 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
AP4E1-201ENST00000261842 SOX12O15370 315 aa18.32■□□□□ 0.52
AP4E1-201ENST00000261842 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
AP4E1-201ENST00000261842 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
AP4E1-201ENST00000261842 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
AP4E1-201ENST00000261842 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
AP4E1-201ENST00000261842 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-201ENST00000261842 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
AP4E1-201ENST00000261842 INSRP06213 1382 aa18.3■□□□□ 0.52
AP4E1-201ENST00000261842 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
AP4E1-201ENST00000261842 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
AP4E1-201ENST00000261842 LETM1O95202 739 aaPredicted RBP18.29■□□□□ 0.52
AP4E1-201ENST00000261842 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
AP4E1-201ENST00000261842 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
AP4E1-201ENST00000261842 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
AP4E1-201ENST00000261842 R3HCC1Q9Y3T6 440 aaKnown RBP18.28■□□□□ 0.52
AP4E1-201ENST00000261842 NOB1Q9ULX3 412 aaKnown RBP18.28■□□□□ 0.52
AP4E1-201ENST00000261842 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
AP4E1-201ENST00000261842 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
AP4E1-201ENST00000261842 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
AP4E1-201ENST00000261842 CHD1LQ86WJ1 897 aa18.27■□□□□ 0.52
AP4E1-201ENST00000261842 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
AP4E1-201ENST00000261842 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.51
AP4E1-201ENST00000261842 DIAPH3Q9NSV4 1193 aa18.26■□□□□ 0.51
AP4E1-201ENST00000261842 RPGRIP1LQ68CZ1 1315 aa18.26■□□□□ 0.51
AP4E1-201ENST00000261842 ZSCAN30Q86W11 494 aa18.25■□□□□ 0.51
AP4E1-201ENST00000261842 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
AP4E1-201ENST00000261842 NUP160Q12769 1436 aa18.25■□□□□ 0.51
AP4E1-201ENST00000261842 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
AP4E1-201ENST00000261842 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
AP4E1-201ENST00000261842 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
AP4E1-201ENST00000261842 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
AP4E1-201ENST00000261842 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
AP4E1-201ENST00000261842 AMPHP49418 695 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 GOLGA6L19H0YKK7 550 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 HSP90B1P14625 803 aaKnown RBP18.23■□□□□ 0.51
AP4E1-201ENST00000261842 TSPY26PQ9H489 355 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
AP4E1-201ENST00000261842 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
AP4E1-201ENST00000261842 GNL2Q13823 731 aaKnown RBP18.22■□□□□ 0.51
AP4E1-201ENST00000261842 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
AP4E1-201ENST00000261842 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
AP4E1-201ENST00000261842 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
AP4E1-201ENST00000261842 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
AP4E1-201ENST00000261842 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
AP4E1-201ENST00000261842 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
AP4E1-201ENST00000261842 PRKAR2BP31323 418 aa18.21■□□□□ 0.51
AP4E1-201ENST00000261842 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
AP4E1-201ENST00000261842 GNAI3P08754 354 aa18.2■□□□□ 0.5
AP4E1-201ENST00000261842 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
AP4E1-201ENST00000261842 BECN2A8MW95 431 aa18.2■□□□□ 0.5
AP4E1-201ENST00000261842 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.19■□□□□ 0.5
AP4E1-201ENST00000261842 UHRF1BP1Q6BDS2 1440 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
AP4E1-201ENST00000261842 FCHSD2O94868 740 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 NEK4P51957 841 aa18.19■□□□□ 0.5
AP4E1-201ENST00000261842 MLECQ14165 292 aa18.18■□□□□ 0.5
AP4E1-201ENST00000261842 RPAP2Q8IXW5 612 aaPredicted RBP18.18■□□□□ 0.5
AP4E1-201ENST00000261842 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.18■□□□□ 0.5
AP4E1-201ENST00000261842 ERC2O15083 957 aa18.18■□□□□ 0.5
AP4E1-201ENST00000261842 H3BQV1 296 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 CLCN1P35523 988 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
AP4E1-201ENST00000261842 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
AP4E1-201ENST00000261842 IGHDP01880 384 aa18.16■□□□□ 0.5
AP4E1-201ENST00000261842 FOXD4L6Q3SYB3 417 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-201ENST00000261842 LMOD2Q6P5Q4 547 aa18.16■□□□□ 0.5
AP4E1-201ENST00000261842 FOXD4L3Q6VB84 417 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-201ENST00000261842 ZNF771Q7L3S4 317 aaPredicted RBP18.16■□□□□ 0.5
AP4E1-201ENST00000261842 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
AP4E1-201ENST00000261842 RNF214Q8ND24 703 aa18.16■□□□□ 0.5
AP4E1-201ENST00000261842 TEX14Q8IWB6 1497 aa18.16■□□□□ 0.5
AP4E1-201ENST00000261842 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
AP4E1-201ENST00000261842 HMOX1P09601 288 aa18.15■□□□□ 0.5
AP4E1-201ENST00000261842 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
AP4E1-201ENST00000261842 NSD2O96028 1365 aa18.15■□□□□ 0.5
AP4E1-201ENST00000261842 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
AP4E1-201ENST00000261842 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms