RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.34
SLC6A4-201ENST00000261707 L3MBTL2Q969R5 705 aa12.96□□□□□ -0.34
SLC6A4-201ENST00000261707 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.34
SLC6A4-201ENST00000261707 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
SLC6A4-201ENST00000261707 LMOD3Q0VAK6 560 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 PDCL2Q8N4E4 241 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 CBX1P83916 185 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 TRIM29Q14134 588 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 PDCL3Q9H2J4 239 aa12.95□□□□□ -0.34
SLC6A4-201ENST00000261707 AKAP17AQ02040 695 aaKnown RBP12.94□□□□□ -0.34
SLC6A4-201ENST00000261707 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
SLC6A4-201ENST00000261707 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
SLC6A4-201ENST00000261707 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
SLC6A4-201ENST00000261707 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
SLC6A4-201ENST00000261707 TTLL5Q6EMB2 1281 aa12.93□□□□□ -0.34
SLC6A4-201ENST00000261707 OLFM4Q6UX06 510 aa12.93□□□□□ -0.34
SLC6A4-201ENST00000261707 WDHD1O75717 1129 aaPredicted RBP12.93□□□□□ -0.34
SLC6A4-201ENST00000261707 CARMIL2Q6F5E8 1435 aa12.92□□□□□ -0.34
SLC6A4-201ENST00000261707 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
SLC6A4-201ENST00000261707 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
SLC6A4-201ENST00000261707 SMC2O95347 1197 aa12.92□□□□□ -0.34
SLC6A4-201ENST00000261707 DZIP1LQ8IYY4 767 aaKnown RBP12.92□□□□□ -0.34
SLC6A4-201ENST00000261707 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
SLC6A4-201ENST00000261707 EFCAB2Q5VUJ9 269 aa12.91□□□□□ -0.34
SLC6A4-201ENST00000261707 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
SLC6A4-201ENST00000261707 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
SLC6A4-201ENST00000261707 ZHX1Q9UKY1 873 aaPredicted RBP12.91□□□□□ -0.34
SLC6A4-201ENST00000261707 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 KIF3BO15066 747 aa12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 FOSBP53539 338 aa12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 ZRSR2Q15696 482 aaKnown RBP12.9□□□□□ -0.34
SLC6A4-201ENST00000261707 CDC45O75419 566 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 PANK3Q9H999 370 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 CPLX1O14810 134 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 IKQ13123 557 aaPredicted RBP12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 SOGA1O94964 1423 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 ERLIN1O75477 346 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 MPNDQ8N594 471 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
SLC6A4-201ENST00000261707 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 DHX37Q8IY37 1157 aaKnown RBP12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 GPATCH11Q8N954 259 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 LNPKQ9C0E8 428 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 ELL2O00472 640 aaPredicted RBP12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 CENPHQ9H3R5 247 aa12.88□□□□□ -0.35
SLC6A4-201ENST00000261707 IBSPP21815 317 aaPredicted RBP12.87□□□□□ -0.35
SLC6A4-201ENST00000261707 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
SLC6A4-201ENST00000261707 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
SLC6A4-201ENST00000261707 AAMPQ13685 434 aa12.87□□□□□ -0.35
SLC6A4-201ENST00000261707 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
SLC6A4-201ENST00000261707 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
SLC6A4-201ENST00000261707 APAF1O14727 1248 aa12.86□□□□□ -0.35
SLC6A4-201ENST00000261707 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
SLC6A4-201ENST00000261707 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
SLC6A4-201ENST00000261707 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
SLC6A4-201ENST00000261707 NUP155O75694 1391 aa12.85□□□□□ -0.35
SLC6A4-201ENST00000261707 CCDC192P0DO97 292 aa12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 STK11IPQ8N1F8 1099 aa12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 MCM4P33991 863 aa12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 HSP90AB2PQ58FF8 381 aa12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
SLC6A4-201ENST00000261707 PANK1Q8TE04 598 aa12.83□□□□□ -0.35
SLC6A4-201ENST00000261707 CCDC102AQ96A19 550 aa12.83□□□□□ -0.35
SLC6A4-201ENST00000261707 TRERF1Q96PN7 1200 aa12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 KIF7Q2M1P5 1343 aa12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 FAM193AP78312 1265 aa12.83□□□□□ -0.36
SLC6A4-201ENST00000261707 RABEP1Q15276 862 aa12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 TEFQ10587 303 aa12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 FYB1O15117 783 aa12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 LRRFIP1Q32MZ4 808 aaKnown RBP12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
SLC6A4-201ENST00000261707 FIBPO43427 364 aa12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
SLC6A4-201ENST00000261707 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms