RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.4
PALB2-201ENST00000261584 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.4
PALB2-201ENST00000261584 TSHZ3Q63HK5 1081 aa12.52□□□□□ -0.4
PALB2-201ENST00000261584 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.4
PALB2-201ENST00000261584 CARD14Q9BXL6 1004 aa12.52□□□□□ -0.4
PALB2-201ENST00000261584 ROCK1Q13464 1354 aa12.52□□□□□ -0.4
PALB2-201ENST00000261584 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.41
PALB2-201ENST00000261584 EIF3AQ14152 1382 aaKnown RBP12.52□□□□□ -0.41
PALB2-201ENST00000261584 UGGT2Q9NYU1 1516 aa12.51□□□□□ -0.41
PALB2-201ENST00000261584 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
PALB2-201ENST00000261584 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
PALB2-201ENST00000261584 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
PALB2-201ENST00000261584 A0A0U1RQG5 324 aaPredicted RBP12.51□□□□□ -0.41
PALB2-201ENST00000261584 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
PALB2-201ENST00000261584 XPCQ01831 940 aaPredicted RBP12.51□□□□□ -0.41
PALB2-201ENST00000261584 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
PALB2-201ENST00000261584 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
PALB2-201ENST00000261584 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
PALB2-201ENST00000261584 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
PALB2-201ENST00000261584 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
PALB2-201ENST00000261584 GDPD2Q9HCC8 539 aa12.5□□□□□ -0.41
PALB2-201ENST00000261584 DRC7Q8IY82 874 aa12.5□□□□□ -0.41
PALB2-201ENST00000261584 DENND4BO75064 1496 aaPredicted RBP12.49□□□□□ -0.41
PALB2-201ENST00000261584 ANO2Q9NQ90 1003 aa12.49□□□□□ -0.41
PALB2-201ENST00000261584 PZPP20742 1482 aa12.49□□□□□ -0.41
PALB2-201ENST00000261584 MAP4K4O95819 1239 aaPredicted RBP12.49□□□□□ -0.41
PALB2-201ENST00000261584 CCDC27Q2M243 656 aa12.49□□□□□ -0.41
PALB2-201ENST00000261584 DDX54Q8TDD1 881 aaKnown RBP12.49□□□□□ -0.41
PALB2-201ENST00000261584 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
PALB2-201ENST00000261584 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 NKTRP30414 1462 aaKnown RBP12.47□□□□□ -0.41
PALB2-201ENST00000261584 RSPH4AQ5TD94 716 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 NSD3Q9BZ95 1437 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 PLEKHH2Q8IVE3 1493 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 NEK4P51957 841 aa12.47□□□□□ -0.41
PALB2-201ENST00000261584 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
PALB2-201ENST00000261584 RRS1Q15050 365 aaKnown RBP12.46□□□□□ -0.41
PALB2-201ENST00000261584 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
PALB2-201ENST00000261584 HECW1Q76N89 1606 aa12.46□□□□□ -0.41
PALB2-201ENST00000261584 FAM177BA6PVY3 158 aa12.46□□□□□ -0.42
PALB2-201ENST00000261584 FOSBP53539 338 aa12.46□□□□□ -0.42
PALB2-201ENST00000261584 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.42
PALB2-201ENST00000261584 GPATCH8Q9UKJ3 1502 aaKnown RBP12.46□□□□□ -0.42
PALB2-201ENST00000261584 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
PALB2-201ENST00000261584 ST18O60284 1047 aa12.45□□□□□ -0.42
PALB2-201ENST00000261584 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
PALB2-201ENST00000261584 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
PALB2-201ENST00000261584 SYCE3A1L190 88 aa12.45□□□□□ -0.42
PALB2-201ENST00000261584 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
PALB2-201ENST00000261584 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
PALB2-201ENST00000261584 ARHGAP5Q13017 1502 aa12.44□□□□□ -0.42
PALB2-201ENST00000261584 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
PALB2-201ENST00000261584 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
PALB2-201ENST00000261584 PRAM1Q96QH2 718 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 GPRASP1Q5JY77 1395 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 K7ELQ4 463 aaPredicted RBP12.43□□□□□ -0.42
PALB2-201ENST00000261584 EIF2S2P20042 333 aaKnown RBP12.43□□□□□ -0.42
PALB2-201ENST00000261584 FGD1P98174 961 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
PALB2-201ENST00000261584 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 KIAA2012Q0VF49 1180 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
PALB2-201ENST00000261584 KRT24Q2M2I5 525 aa12.43□□□□□ -0.42
PALB2-201ENST00000261584 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
PALB2-201ENST00000261584 ZNF830Q96NB3 372 aaPredicted RBP12.43□□□□□ -0.42
PALB2-201ENST00000261584 NUP153P49790 1475 aaKnown RBP12.42□□□□□ -0.42
PALB2-201ENST00000261584 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
PALB2-201ENST00000261584 SPC24Q8NBT2 197 aa12.42□□□□□ -0.42
PALB2-201ENST00000261584 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
PALB2-201ENST00000261584 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
PALB2-201ENST00000261584 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
PALB2-201ENST00000261584 A0A0G2JS52 829 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 ZNF592Q92610 1267 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 SCAPERQ9BY12 1400 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 F6X3S4 739 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 GAS2L3Q86XJ1 694 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
PALB2-201ENST00000261584 CDC45O75419 566 aa12.4□□□□□ -0.42
PALB2-201ENST00000261584 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
PALB2-201ENST00000261584 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
PALB2-201ENST00000261584 KIAA0586Q9BVV6 1533 aa12.4□□□□□ -0.42
PALB2-201ENST00000261584 SKOR2Q2VWA4 1001 aaPredicted RBP12.4□□□□□ -0.42
PALB2-201ENST00000261584 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
PALB2-201ENST00000261584 CUL7Q14999 1698 aa12.4□□□□□ -0.43
PALB2-201ENST00000261584 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.43
PALB2-201ENST00000261584 FIBPO43427 364 aa12.4□□□□□ -0.43
PALB2-201ENST00000261584 MCCP23508 829 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
PALB2-201ENST00000261584 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 NPHP1O15259 732 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 MCM10Q7L590 875 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 WAPLQ7Z5K2 1190 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
PALB2-201ENST00000261584 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
PALB2-201ENST00000261584 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms