RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TSPYL1Q9H0U9 437 aa15.8■□□□□ 0.12
TMEM260-201ENST00000261556 SYCE3A1L190 88 aa15.79■□□□□ 0.12
TMEM260-201ENST00000261556 TERF1P54274 439 aa15.79■□□□□ 0.12
TMEM260-201ENST00000261556 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
TMEM260-201ENST00000261556 SKIDA1Q1XH10 827 aa15.79■□□□□ 0.12
TMEM260-201ENST00000261556 AMPHP49418 695 aa15.78■□□□□ 0.12
TMEM260-201ENST00000261556 IPO8O15397 1037 aaKnown RBP15.78■□□□□ 0.12
TMEM260-201ENST00000261556 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
TMEM260-201ENST00000261556 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
TMEM260-201ENST00000261556 BANK1Q8NDB2 785 aa15.77■□□□□ 0.12
TMEM260-201ENST00000261556 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.11
TMEM260-201ENST00000261556 DEF6Q9H4E7 631 aa15.77■□□□□ 0.11
TMEM260-201ENST00000261556 CCDC9Q9Y3X0 531 aaKnown RBP15.77■□□□□ 0.11
TMEM260-201ENST00000261556 SSFA2P28290 1259 aa15.76■□□□□ 0.11
TMEM260-201ENST00000261556 C17orf53Q8N3J3 647 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-201ENST00000261556 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-201ENST00000261556 C10orf67Q8IYJ2 551 aa15.76■□□□□ 0.11
TMEM260-201ENST00000261556 NOL7Q9UMY1 257 aaKnown RBP15.76■□□□□ 0.11
TMEM260-201ENST00000261556 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
TMEM260-201ENST00000261556 GPS2Q13227 327 aa15.75■□□□□ 0.11
TMEM260-201ENST00000261556 ATP2B3Q16720 1220 aa15.75■□□□□ 0.11
TMEM260-201ENST00000261556 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
TMEM260-201ENST00000261556 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
TMEM260-201ENST00000261556 PRIMPOLQ96LW4 560 aa15.74■□□□□ 0.11
TMEM260-201ENST00000261556 NOM1Q5C9Z4 860 aaKnown RBP15.74■□□□□ 0.11
TMEM260-201ENST00000261556 RSPH14Q9UHP6 348 aa15.74■□□□□ 0.11
TMEM260-201ENST00000261556 PDZRN3Q9UPQ7 1066 aa15.74■□□□□ 0.11
TMEM260-201ENST00000261556 POLR3GO15318 223 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-201ENST00000261556 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-201ENST00000261556 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
TMEM260-201ENST00000261556 MYRIPQ8NFW9 859 aa15.72■□□□□ 0.11
TMEM260-201ENST00000261556 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
TMEM260-201ENST00000261556 BCAR3O75815 825 aa15.72■□□□□ 0.11
TMEM260-201ENST00000261556 NOLC1Q14978 699 aaKnown RBP eCLIP15.72■□□□□ 0.11
TMEM260-201ENST00000261556 CFTRP13569 1480 aa15.71■□□□□ 0.11
TMEM260-201ENST00000261556 CCDC112Q8NEF3 446 aa15.71■□□□□ 0.11
TMEM260-201ENST00000261556 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
TMEM260-201ENST00000261556 SMC4Q9NTJ3 1288 aa15.71■□□□□ 0.11
TMEM260-201ENST00000261556 TSPY26PQ9H489 355 aa15.71■□□□□ 0.1
TMEM260-201ENST00000261556 CWC15Q9P013 229 aaKnown RBP15.71■□□□□ 0.1
TMEM260-201ENST00000261556 BCL2L12Q9HB09 334 aa15.7■□□□□ 0.1
TMEM260-201ENST00000261556 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
TMEM260-201ENST00000261556 PHF14O94880 888 aa15.7■□□□□ 0.1
TMEM260-201ENST00000261556 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
TMEM260-201ENST00000261556 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
TMEM260-201ENST00000261556 ZRSR1Q15695 479 aaKnown RBP15.7■□□□□ 0.1
TMEM260-201ENST00000261556 TBC1D32Q96NH3 1257 aa15.7■□□□□ 0.1
TMEM260-201ENST00000261556 MCM5P33992 734 aa15.69■□□□□ 0.1
TMEM260-201ENST00000261556 KIF15Q9NS87 1388 aa15.69■□□□□ 0.1
TMEM260-201ENST00000261556 LOC102724159A0A0B4J2E5 919 aa15.69■□□□□ 0.1
TMEM260-201ENST00000261556 TULP1O00294 542 aaPredicted RBP15.69■□□□□ 0.1
TMEM260-201ENST00000261556 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
TMEM260-201ENST00000261556 PWP2Q15269 919 aaKnown RBP15.69■□□□□ 0.1
TMEM260-201ENST00000261556 USP25Q9UHP3 1055 aa15.69■□□□□ 0.1
TMEM260-201ENST00000261556 TPD52L1Q16890 204 aaPredicted RBP15.69■□□□□ 0.1
TMEM260-201ENST00000261556 PHLDB1Q86UU1 1377 aa15.69■□□□□ 0.1
TMEM260-201ENST00000261556 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.68■□□□□ 0.1
TMEM260-201ENST00000261556 V9GYY5 206 aaPredicted RBP15.68■□□□□ 0.1
TMEM260-201ENST00000261556 RNF123Q5XPI4 1314 aa15.68■□□□□ 0.1
TMEM260-201ENST00000261556 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
TMEM260-201ENST00000261556 KRT222Q8N1A0 295 aa15.68■□□□□ 0.1
TMEM260-201ENST00000261556 OGFRQ9NZT2 677 aa15.68■□□□□ 0.1
TMEM260-201ENST00000261556 SLC4A10Q6U841 1118 aa15.68■□□□□ 0.1
TMEM260-201ENST00000261556 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
TMEM260-201ENST00000261556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
TMEM260-201ENST00000261556 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
TMEM260-201ENST00000261556 GNL2Q13823 731 aaKnown RBP15.67■□□□□ 0.1
TMEM260-201ENST00000261556 ZSCAN23Q3MJ62 389 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 DRC1Q96MC2 740 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 RBSNQ9H1K0 784 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 IGHDP01880 384 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 EVC2Q86UK5 1308 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 USP47Q96K76 1375 aa15.67■□□□□ 0.1
TMEM260-201ENST00000261556 C16orf45Q96MC5 204 aaPredicted RBP15.67■□□□□ 0.1
TMEM260-201ENST00000261556 NUCB2P80303 420 aa15.66■□□□□ 0.1
TMEM260-201ENST00000261556 CCAR2Q8N163 923 aaKnown RBP15.66■□□□□ 0.1
TMEM260-201ENST00000261556 RGS22Q8NE09 1264 aa15.66■□□□□ 0.1
TMEM260-201ENST00000261556 NOL10Q9BSC4 688 aaKnown RBP15.66■□□□□ 0.1
TMEM260-201ENST00000261556 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
TMEM260-201ENST00000261556 RASSF4Q9H2L5 321 aa15.66■□□□□ 0.1
TMEM260-201ENST00000261556 TDO2P48775 406 aa15.65■□□□□ 0.1
TMEM260-201ENST00000261556 KIF21BO75037 1637 aa15.65■□□□□ 0.1
TMEM260-201ENST00000261556 GORABQ5T7V8 394 aa15.65■□□□□ 0.1
TMEM260-201ENST00000261556 COG3Q96JB2 828 aa15.65■□□□□ 0.1
TMEM260-201ENST00000261556 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 ZNF500O60304 480 aaPredicted RBP15.64■□□□□ 0.09
TMEM260-201ENST00000261556 UACAQ9BZF9 1416 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 HS1BP3Q53T59 392 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 PPP1R9BQ96SB3 815 aa15.64■□□□□ 0.09
TMEM260-201ENST00000261556 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
TMEM260-201ENST00000261556 LNPKQ9C0E8 428 aa15.63■□□□□ 0.09
TMEM260-201ENST00000261556 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
TMEM260-201ENST00000261556 SETQ01105 290 aaPredicted RBP15.63■□□□□ 0.09
TMEM260-201ENST00000261556 FEZ1Q99689 392 aa15.63■□□□□ 0.09
TMEM260-201ENST00000261556 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
TMEM260-201ENST00000261556 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
TMEM260-201ENST00000261556 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms