RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 CCDC191Q8NCU4 936 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 CLUAP1Q96AJ1 413 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 AKNAQ7Z591 1439 aa10.09□□□□□ -0.79
SNCAIP-201ENST00000261367 NUP160Q12769 1436 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 H0YHG0 523 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 NAT10Q9H0A0 1025 aaKnown RBP10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 PES1O00541 588 aaKnown RBP10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 HOMER1Q86YM7 354 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 SMC4Q9NTJ3 1288 aa10.08□□□□□ -0.8
SNCAIP-201ENST00000261367 ERLIN1O75477 346 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 MORC1Q86VD1 984 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 GPATCH3Q96I76 525 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 OFD1O75665 1012 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
SNCAIP-201ENST00000261367 FEZ1Q99689 392 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 ABCA8O94911 1581 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 FAM193AP78312 1265 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 GIMAP7Q8NHV1 300 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 TXLNBQ8N3L3 684 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 RUFY1Q96T51 708 aa10.06□□□□□ -0.8
SNCAIP-201ENST00000261367 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 DDX11Q96FC9 970 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 SYNJ2O15056 1496 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 ABCC5O15440 1437 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 CLGNO14967 610 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 UVSSAQ2YD98 709 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 CFDP1Q9UEE9 299 aaPredicted RBP10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 CDC45O75419 566 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 KIAA0754O94854 1291 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 OS9Q13438 667 aaPredicted RBP10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
SNCAIP-201ENST00000261367 LMOD3Q0VAK6 560 aa10.04□□□□□ -0.8
SNCAIP-201ENST00000261367 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
SNCAIP-201ENST00000261367 POGKQ9P215 609 aa10.04□□□□□ -0.8
SNCAIP-201ENST00000261367 RBM28Q9NW13 759 aaKnown RBP10.04□□□□□ -0.8
SNCAIP-201ENST00000261367 DHX29Q7Z478 1369 aaKnown RBP10.04□□□□□ -0.8
SNCAIP-201ENST00000261367 NEMFO60524 1076 aa10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 UTP14CQ5TAP6 766 aaKnown RBP10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 USP47Q96K76 1375 aa10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 DAPK1P53355 1430 aa10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 K7ELQ4 463 aaPredicted RBP10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 ZNF644Q9H582 1327 aaPredicted RBP10.03□□□□□ -0.8
SNCAIP-201ENST00000261367 GTF2A1P52655 376 aaPredicted RBP10.02□□□□□ -0.8
SNCAIP-201ENST00000261367 CBX1P83916 185 aa10.02□□□□□ -0.8
SNCAIP-201ENST00000261367 PRG4Q92954 1404 aaPredicted RBP10.02□□□□□ -0.8
SNCAIP-201ENST00000261367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 ZHX1Q9UKY1 873 aaPredicted RBP10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 PLIN1O60240 522 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 TUBB4AP04350 444 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 GABPB1Q06547 395 aaPredicted RBP10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 FILIP1Q7Z7B0 1213 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 IVLP07476 585 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 KRT222Q8N1A0 295 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 PAXBP1Q9Y5B6 917 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 ABCC10Q5T3U5 1492 aa10.02□□□□□ -0.81
SNCAIP-201ENST00000261367 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 POLR1AO95602 1720 aaPredicted RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 GPATCH8Q9UKJ3 1502 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 BMS1Q14692 1282 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 HMGB1P09429 215 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 CT47B1P0C2W7 299 aaPredicted RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 ZRSR2Q15696 482 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 CCAR2Q8N163 923 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 CHD1O14646 1710 aa10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 SSR1P43307 286 aaKnown RBP10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 TMCO3Q6UWJ1 677 aa10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
SNCAIP-201ENST00000261367 PZPP20742 1482 aa10□□□□□ -0.81
SNCAIP-201ENST00000261367 SHROOM2Q13796 1616 aa10□□□□□ -0.81
SNCAIP-201ENST00000261367 GOLGA6L7A0A1B0GV03 622 aa10□□□□□ -0.81
SNCAIP-201ENST00000261367 IPO7O95373 1038 aaKnown RBP10□□□□□ -0.81
SNCAIP-201ENST00000261367 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
SNCAIP-201ENST00000261367 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
SNCAIP-201ENST00000261367 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
SNCAIP-201ENST00000261367 INCENPQ9NQS7 918 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 ANKRD20A12PQ8NF67 263 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 ITSN2Q9NZM3 1697 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 MCM3P25205 808 aa9.99□□□□□ -0.81
SNCAIP-201ENST00000261367 TTLL5Q6EMB2 1281 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms