RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.03
USP30-201ENST00000257548 CASC1Q6TDU7 716 aa15.26■□□□□ 0.03
USP30-201ENST00000257548 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
USP30-201ENST00000257548 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
USP30-201ENST00000257548 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
USP30-201ENST00000257548 NUP160Q12769 1436 aa15.25■□□□□ 0.03
USP30-201ENST00000257548 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
USP30-201ENST00000257548 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
USP30-201ENST00000257548 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
USP30-201ENST00000257548 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
USP30-201ENST00000257548 SLC12A5Q9H2X9 1139 aa15.25■□□□□ 0.03
USP30-201ENST00000257548 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
USP30-201ENST00000257548 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
USP30-201ENST00000257548 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
USP30-201ENST00000257548 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
USP30-201ENST00000257548 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
USP30-201ENST00000257548 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
USP30-201ENST00000257548 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
USP30-201ENST00000257548 USP19O94966 1318 aa15.23■□□□□ 0.03
USP30-201ENST00000257548 PTMSP20962 102 aa15.22■□□□□ 0.03
USP30-201ENST00000257548 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
USP30-201ENST00000257548 TESK2Q96S53 571 aa15.22■□□□□ 0.03
USP30-201ENST00000257548 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
USP30-201ENST00000257548 PLEKHH2Q8IVE3 1493 aa15.22■□□□□ 0.03
USP30-201ENST00000257548 CHAF1AQ13111 956 aaPredicted RBP15.21■□□□□ 0.03
USP30-201ENST00000257548 CHMP3Q9Y3E7 222 aa15.21■□□□□ 0.03
USP30-201ENST00000257548 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.03
USP30-201ENST00000257548 ARHGAP5Q13017 1502 aa15.21■□□□□ 0.02
USP30-201ENST00000257548 SYCE3A1L190 88 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 SOX12O15370 315 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 ANTXR1Q9H6X2 564 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 RIPK4P57078 832 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 CBX1P83916 185 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 DRC7Q8IY82 874 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
USP30-201ENST00000257548 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
USP30-201ENST00000257548 ST18O60284 1047 aa15.19■□□□□ 0.02
USP30-201ENST00000257548 IGSF3O75054 1194 aa15.19■□□□□ 0.02
USP30-201ENST00000257548 BCORL1Q5H9F3 1711 aa15.19■□□□□ 0.02
USP30-201ENST00000257548 ABCC10Q5T3U5 1492 aa15.18■□□□□ 0.02
USP30-201ENST00000257548 KIF3BO15066 747 aa15.18■□□□□ 0.02
USP30-201ENST00000257548 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
USP30-201ENST00000257548 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
USP30-201ENST00000257548 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
USP30-201ENST00000257548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
USP30-201ENST00000257548 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
USP30-201ENST00000257548 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
USP30-201ENST00000257548 TRIM27P14373 513 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 TSC1Q92574 1164 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 ZNF830Q96NB3 372 aaPredicted RBP15.16■□□□□ 0.02
USP30-201ENST00000257548 FSD2A1L4K1 749 aa15.16■□□□□ 0.02
USP30-201ENST00000257548 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
USP30-201ENST00000257548 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
USP30-201ENST00000257548 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
USP30-201ENST00000257548 BAG4O95429 457 aaKnown RBP15.15■□□□□ 0.02
USP30-201ENST00000257548 NUCB2P80303 420 aa15.15■□□□□ 0.02
USP30-201ENST00000257548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
USP30-201ENST00000257548 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
USP30-201ENST00000257548 ZNF771Q7L3S4 317 aaPredicted RBP15.14■□□□□ 0.01
USP30-201ENST00000257548 GDPD2Q9HCC8 539 aa15.14■□□□□ 0.01
USP30-201ENST00000257548 SPAG9O60271 1321 aaKnown RBP15.14■□□□□ 0.01
USP30-201ENST00000257548 HMOX1P09601 288 aa15.14■□□□□ 0.01
USP30-201ENST00000257548 CSPP1Q1MSJ5 1256 aa15.14■□□□□ 0.01
USP30-201ENST00000257548 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
USP30-201ENST00000257548 GGT6Q6P531 493 aa15.13■□□□□ 0.01
USP30-201ENST00000257548 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
USP30-201ENST00000257548 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
USP30-201ENST00000257548 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
USP30-201ENST00000257548 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
USP30-201ENST00000257548 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
USP30-201ENST00000257548 NEK4P51957 841 aa15.13■□□□□ 0.01
USP30-201ENST00000257548 CCDC141Q6ZP82 1450 aa15.12■□□□□ 0.01
USP30-201ENST00000257548 ABCA8O94911 1581 aa15.12■□□□□ 0.01
USP30-201ENST00000257548 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
USP30-201ENST00000257548 ZNF592Q92610 1267 aa15.12■□□□□ 0.01
USP30-201ENST00000257548 SPC24Q8NBT2 197 aa15.11■□□□□ 0.01
USP30-201ENST00000257548 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
USP30-201ENST00000257548 TRAPPC8Q9Y2L5 1435 aa15.11■□□□□ 0.01
USP30-201ENST00000257548 ADGRL2O95490 1459 aa15.11■□□□□ 0.01
USP30-201ENST00000257548 RALGAPBQ86X10 1494 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 CDC45O75419 566 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 CIZ1Q9ULV3 898 aaPredicted RBP15.1■□□□□ 0.01
USP30-201ENST00000257548 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 OFD1O75665 1012 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 TBC1D9Q6ZT07 1266 aa15.1■□□□□ 0.01
USP30-201ENST00000257548 ZSCAN23Q3MJ62 389 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 KIF16BQ96L93 1317 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 CHMP4BQ9H444 224 aaKnown RBP15.09■□□□□ 0.01
USP30-201ENST00000257548 CABP2Q9NPB3 220 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
USP30-201ENST00000257548 SAMD9LQ8IVG5 1584 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms