RNA–Protein interactions for RNA: ENST00000250823.4

VCY1B-201, Transcript of variable charge Y-linked 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCY1B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCY1B-201ENST00000250823 DHX57Q6P158 1386 aaKnown RBP28.06■■■□□ 2.08
VCY1B-201ENST00000250823 RGS17Q9UGC6 210 aaPredicted RBP28.03■■■□□ 2.08
VCY1B-201ENST00000250823 CFAP70Q5T0N1 1121 aa28.02■■■□□ 2.08
VCY1B-201ENST00000250823 WAPLQ7Z5K2 1190 aa28■■■□□ 2.07
VCY1B-201ENST00000250823 MEX3CQ5U5Q3 659 aaKnown RBP27.98■■■□□ 2.07
VCY1B-201ENST00000250823 DCAF11Q8TEB1 546 aa27.97■■■□□ 2.07
VCY1B-201ENST00000250823 ORAI2Q96SN7 254 aa27.97■■■□□ 2.07
VCY1B-201ENST00000250823 LRP6O75581 1613 aa27.96■■■□□ 2.07
VCY1B-201ENST00000250823 PLEKHH1Q9ULM0 1364 aa27.95■■■□□ 2.06
VCY1B-201ENST00000250823 SOS2Q07890 1332 aaPredicted RBP27.93■■■□□ 2.06
VCY1B-201ENST00000250823 DLC1Q96QB1 1528 aa27.93■■■□□ 2.06
VCY1B-201ENST00000250823 ESCO1Q5FWF5 840 aa27.93■■■□□ 2.06
VCY1B-201ENST00000250823 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
VCY1B-201ENST00000250823 KDM2AQ9Y2K7 1162 aa27.93■■■□□ 2.06
VCY1B-201ENST00000250823 NPHP3Q7Z494 1330 aa27.92■■■□□ 2.06
VCY1B-201ENST00000250823 PNPLA6Q8IY17 1366 aa27.91■■■□□ 2.06
VCY1B-201ENST00000250823 ZNF772Q68DY9 489 aaPredicted RBP27.9■■■□□ 2.06
VCY1B-201ENST00000250823 POTEAQ6S8J7 498 aa27.9■■■□□ 2.06
VCY1B-201ENST00000250823 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
VCY1B-201ENST00000250823 NUTM2BA6NNL0 878 aaPredicted RBP27.88■■■□□ 2.05
VCY1B-201ENST00000250823 NUTM2EB1AL46 878 aaPredicted RBP27.88■■■□□ 2.05
VCY1B-201ENST00000250823 NUTM2AQ8IVF1 878 aaPredicted RBP27.88■■■□□ 2.05
VCY1B-201ENST00000250823 PRAM1Q96QH2 718 aa27.88■■■□□ 2.05
VCY1B-201ENST00000250823 POGKQ9P215 609 aa27.87■■■□□ 2.05
VCY1B-201ENST00000250823 FMN2Q9NZ56 1722 aa27.86■■■□□ 2.05
VCY1B-201ENST00000250823 NUTM2FA1L443 756 aa27.83■■■□□ 2.05
VCY1B-201ENST00000250823 KIF1AQ12756 1690 aa27.82■■■□□ 2.04
VCY1B-201ENST00000250823 FOXO3O43524 673 aa27.81■■■□□ 2.04
VCY1B-201ENST00000250823 TRAK1Q9UPV9 953 aa27.81■■■□□ 2.04
VCY1B-201ENST00000250823 PXDNQ92626 1479 aa27.8■■■□□ 2.04
VCY1B-201ENST00000250823 ADGRB2O60241 1585 aa27.79■■■□□ 2.04
VCY1B-201ENST00000250823 SAFB2Q14151 953 aaKnown RBP eCLIP27.79■■■□□ 2.04
VCY1B-201ENST00000250823 EIF3AQ14152 1382 aaKnown RBP27.78■■■□□ 2.04
VCY1B-201ENST00000250823 ANKARQ7Z5J8 1434 aa27.77■■■□□ 2.04
VCY1B-201ENST00000250823 COL22A1Q8NFW1 1626 aaPredicted RBP27.76■■■□□ 2.03
VCY1B-201ENST00000250823 AFF2P51816 1311 aa27.75■■■□□ 2.03
VCY1B-201ENST00000250823 C8orf37Q96NL8 207 aa27.74■■■□□ 2.03
VCY1B-201ENST00000250823 PHF8Q9UPP1 1060 aa27.74■■■□□ 2.03
VCY1B-201ENST00000250823 KIAA1210Q9ULL0 1709 aa27.73■■■□□ 2.03
VCY1B-201ENST00000250823 PSME1Q06323 249 aa27.72■■■□□ 2.03
VCY1B-201ENST00000250823 XPCQ01831 940 aaPredicted RBP27.71■■■□□ 2.03
VCY1B-201ENST00000250823 ADAMTS2O95450 1211 aa27.7■■■□□ 2.02
VCY1B-201ENST00000250823 RXRBP28702 533 aa27.7■■■□□ 2.02
VCY1B-201ENST00000250823 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
VCY1B-201ENST00000250823 NGLY1Q96IV0 654 aa27.69■■■□□ 2.02
VCY1B-201ENST00000250823 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
VCY1B-201ENST00000250823 MINK1Q8N4C8 1332 aaPredicted RBP27.68■■■□□ 2.02
VCY1B-201ENST00000250823 WASLO00401 505 aaPredicted RBP27.67■■■□□ 2.02
VCY1B-201ENST00000250823 HIRIP3Q9BW71 556 aaPredicted RBP27.67■■■□□ 2.02
VCY1B-201ENST00000250823 ARHGEF28Q8N1W1 1705 aaKnown RBP27.67■■■□□ 2.02
VCY1B-201ENST00000250823 TULP4Q9NRJ4 1543 aa27.67■■■□□ 2.02
VCY1B-201ENST00000250823 CDK12Q9NYV4 1490 aaPredicted RBP27.66■■■□□ 2.02
VCY1B-201ENST00000250823 SBNO1A3KN83 1393 aa27.64■■■□□ 2.02
VCY1B-201ENST00000250823 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
VCY1B-201ENST00000250823 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
VCY1B-201ENST00000250823 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
VCY1B-201ENST00000250823 USP32Q8NFA0 1604 aa27.63■■■□□ 2.01
VCY1B-201ENST00000250823 RBM6P78332 1123 aaKnown RBP27.61■■■□□ 2.01
VCY1B-201ENST00000250823 FNBP4Q8N3X1 1017 aaPredicted RBP27.61■■■□□ 2.01
VCY1B-201ENST00000250823 L3MBTL2Q969R5 705 aa27.61■■■□□ 2.01
VCY1B-201ENST00000250823 ARHGEF10O15013 1369 aa27.6■■■□□ 2.01
VCY1B-201ENST00000250823 PMFBP1Q8TBY8 1022 aa27.6■■■□□ 2.01
VCY1B-201ENST00000250823 USP21Q9UK80 565 aa27.6■■■□□ 2.01
VCY1B-201ENST00000250823 GPRASP1Q5JY77 1395 aa27.6■■■□□ 2.01
VCY1B-201ENST00000250823 SIN3AQ96ST3 1273 aa27.58■■■□□ 2.01
VCY1B-201ENST00000250823 TRPC5Q9UL62 973 aaPredicted RBP27.58■■■□□ 2.01
VCY1B-201ENST00000250823 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
VCY1B-201ENST00000250823 PRR36Q9H6K5 1346 aa27.57■■■□□ 2
VCY1B-201ENST00000250823 TRIM26Q12899 539 aaPredicted RBP27.56■■■□□ 2
VCY1B-201ENST00000250823 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
VCY1B-201ENST00000250823 NEUROD1Q13562 356 aa27.55■■■□□ 2
VCY1B-201ENST00000250823 MARF1Q9Y4F3 1742 aaKnown RBP27.54■■■□□ 2
VCY1B-201ENST00000250823 ITSN1Q15811 1721 aa27.53■■■□□ 2
VCY1B-201ENST00000250823 ATP7BP35670 1465 aa27.53■■■□□ 2
VCY1B-201ENST00000250823 NGDNQ8NEJ9 315 aaKnown RBP27.53■■■□□ 2
VCY1B-201ENST00000250823 CENPJQ9HC77 1338 aaPredicted RBP27.52■■■□□ 2
VCY1B-201ENST00000250823 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
VCY1B-201ENST00000250823 NUDT16Q96DE0 195 aaKnown RBP27.52■■■□□ 2
VCY1B-201ENST00000250823 CDK19Q9BWU1 502 aa27.52■■■□□ 2
VCY1B-201ENST00000250823 ATRNO75882 1429 aa27.5■■□□□ 1.99
VCY1B-201ENST00000250823 BCL9LQ86UU0 1499 aa27.48■■□□□ 1.99
VCY1B-201ENST00000250823 RGS12O14924 1447 aa27.48■■□□□ 1.99
VCY1B-201ENST00000250823 CCDC61Q9Y6R9 512 aa27.47■■□□□ 1.99
VCY1B-201ENST00000250823 TRPM3Q9HCF6 1732 aaPredicted RBP27.47■■□□□ 1.99
VCY1B-201ENST00000250823 SLIT2O94813 1529 aa27.46■■□□□ 1.99
VCY1B-201ENST00000250823 TRPM1Q7Z4N2 1603 aa27.45■■□□□ 1.99
VCY1B-201ENST00000250823 ROCK2O75116 1388 aaKnown RBP27.45■■□□□ 1.98
VCY1B-201ENST00000250823 UNC5CLQ8IV45 518 aa27.44■■□□□ 1.98
VCY1B-201ENST00000250823 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.44■■□□□ 1.98
VCY1B-201ENST00000250823 CABLES1Q8TDN4 633 aa27.43■■□□□ 1.98
VCY1B-201ENST00000250823 ALS2Q96Q42 1657 aa27.43■■□□□ 1.98
VCY1B-201ENST00000250823 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
VCY1B-201ENST00000250823 POLR3AO14802 1390 aaPredicted RBP27.42■■□□□ 1.98
VCY1B-201ENST00000250823 TOPAZ1Q8N9V7 1692 aa27.41■■□□□ 1.98
VCY1B-201ENST00000250823 PLEKHG3A1L390 1219 aa27.41■■□□□ 1.98
VCY1B-201ENST00000250823 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
VCY1B-201ENST00000250823 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
VCY1B-201ENST00000250823 TONSLQ96HA7 1378 aa27.4■■□□□ 1.98
VCY1B-201ENST00000250823 UPF1Q92900 1129 aaKnown RBP eCLIP27.4■■□□□ 1.98
VCY1B-201ENST00000250823 GJD4Q96KN9 370 aaPredicted RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms