RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 IQCEQ6IPM2 695 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
USP6-201ENST00000250066 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
USP6-201ENST00000250066 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 DESP17661 470 aa10.35□□□□□ -0.75
USP6-201ENST00000250066 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
USP6-201ENST00000250066 LRRFIP2Q9Y608 721 aaKnown RBP10.35□□□□□ -0.75
USP6-201ENST00000250066 FAM193AP78312 1265 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 KIF3BO15066 747 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 PDE4AP27815 886 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 FEZ1Q99689 392 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 PHLDB1Q86UU1 1377 aa10.34□□□□□ -0.75
USP6-201ENST00000250066 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
USP6-201ENST00000250066 NEBLO76041 1014 aa10.33□□□□□ -0.76
USP6-201ENST00000250066 CFAP45Q9UL16 551 aa10.33□□□□□ -0.76
USP6-201ENST00000250066 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
USP6-201ENST00000250066 FMNL2Q96PY5 1086 aa10.33□□□□□ -0.76
USP6-201ENST00000250066 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
USP6-201ENST00000250066 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
USP6-201ENST00000250066 KRT18P05783 430 aaKnown RBP10.32□□□□□ -0.76
USP6-201ENST00000250066 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
USP6-201ENST00000250066 NGEFQ8N5V2 710 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 RNF214Q8ND24 703 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 SMARCA2P51531 1590 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 EEA1Q15075 1411 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 DHX8Q14562 1220 aaKnown RBP10.32□□□□□ -0.76
USP6-201ENST00000250066 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
USP6-201ENST00000250066 MRE11P49959 708 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 PPM1FP49593 454 aaPredicted RBP10.32□□□□□ -0.76
USP6-201ENST00000250066 ERICH4A6NGS2 130 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
USP6-201ENST00000250066 PPFIBP1Q86W92 1011 aa10.31□□□□□ -0.76
USP6-201ENST00000250066 STIM1Q13586 685 aa10.31□□□□□ -0.76
USP6-201ENST00000250066 INTS3Q68E01 1043 aaKnown RBP10.31□□□□□ -0.76
USP6-201ENST00000250066 CCDC175P0C221 793 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 SPC24Q8NBT2 197 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 ANAPC15P60006 121 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 DDX11Q96FC9 970 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 RBM25P49756 843 aaKnown RBP10.3□□□□□ -0.76
USP6-201ENST00000250066 EVA1CP58658 441 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 SERPINC1P01008 464 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 G3BP1Q13283 466 aaKnown RBP eCLIP10.3□□□□□ -0.76
USP6-201ENST00000250066 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 FAM177A1Q8N128 213 aaPredicted RBP10.3□□□□□ -0.76
USP6-201ENST00000250066 FYB1O15117 783 aa10.3□□□□□ -0.76
USP6-201ENST00000250066 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
USP6-201ENST00000250066 TEFQ10587 303 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 CCDC27Q2M243 656 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 TTC5Q8N0Z6 440 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 ROCK1Q13464 1354 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
USP6-201ENST00000250066 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
USP6-201ENST00000250066 CAVIN1Q6NZI2 390 aaKnown RBP10.28□□□□□ -0.76
USP6-201ENST00000250066 TMCO3Q6UWJ1 677 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 BCL2L13Q9BXK5 485 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 SHTN1A0MZ66 631 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 HSPA5P11021 654 aaKnown RBP10.28□□□□□ -0.76
USP6-201ENST00000250066 ERC2O15083 957 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 TRIM21P19474 475 aaKnown RBP10.28□□□□□ -0.76
USP6-201ENST00000250066 ZWINTO95229 277 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 DDX58O95786 925 aaKnown RBP10.28□□□□□ -0.76
USP6-201ENST00000250066 PDCP20941 246 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 PSMA5P28066 241 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 GPATCH11Q8N954 259 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 TSPY26PQ9H489 355 aa10.28□□□□□ -0.76
USP6-201ENST00000250066 ELL2O00472 640 aaPredicted RBP10.28□□□□□ -0.76
USP6-201ENST00000250066 CRACR2AQ9BSW2 395 aa10.27□□□□□ -0.76
USP6-201ENST00000250066 KIF27Q86VH2 1401 aa10.27□□□□□ -0.77
USP6-201ENST00000250066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP6-201ENST00000250066 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
USP6-201ENST00000250066 TANGO6Q9C0B7 1094 aa10.27□□□□□ -0.77
USP6-201ENST00000250066 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
USP6-201ENST00000250066 CCDC113Q9H0I3 377 aa10.27□□□□□ -0.77
USP6-201ENST00000250066 MBD3O95983 291 aa10.27□□□□□ -0.77
USP6-201ENST00000250066 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.77
USP6-201ENST00000250066 JAKMIP3Q5VZ66 844 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 PUS7Q96PZ0 661 aaKnown RBP10.26□□□□□ -0.77
USP6-201ENST00000250066 ANKRD18BA2A2Z9 1011 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 ATP2B1P20020 1258 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 IBSPP21815 317 aaPredicted RBP10.26□□□□□ -0.77
USP6-201ENST00000250066 SSR1P43307 286 aaKnown RBP10.26□□□□□ -0.77
USP6-201ENST00000250066 ZHX3Q9H4I2 956 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 EIF2S2P20042 333 aaKnown RBP10.26□□□□□ -0.77
USP6-201ENST00000250066 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
USP6-201ENST00000250066 NINLQ9Y2I6 1382 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 GGT6Q6P531 493 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 DACH1Q9UI36 760 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 RRP7AQ9Y3A4 280 aaKnown RBP10.25□□□□□ -0.77
USP6-201ENST00000250066 DAAM2Q86T65 1068 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 CETN2P41208 172 aa10.25□□□□□ -0.77
USP6-201ENST00000250066 ZNF396Q96N95 335 aaPredicted RBP10.25□□□□□ -0.77
USP6-201ENST00000250066 SLC3A2P08195 630 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms