RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
VPREB3-201ENST00000248948 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
VPREB3-201ENST00000248948 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
VPREB3-201ENST00000248948 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
VPREB3-201ENST00000248948 STK26Q9P289 416 aa18.52■□□□□ 0.56
VPREB3-201ENST00000248948 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
VPREB3-201ENST00000248948 KDM2AQ9Y2K7 1162 aa18.51■□□□□ 0.55
VPREB3-201ENST00000248948 RGPD8O14715 1765 aaPredicted RBP18.5■□□□□ 0.55
VPREB3-201ENST00000248948 ITSN1Q15811 1721 aa18.49■□□□□ 0.55
VPREB3-201ENST00000248948 JCADQ9P266 1359 aa18.48■□□□□ 0.55
VPREB3-201ENST00000248948 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
VPREB3-201ENST00000248948 DISP3Q9P2K9 1392 aa18.47■□□□□ 0.55
VPREB3-201ENST00000248948 WAPLQ7Z5K2 1190 aa18.47■□□□□ 0.55
VPREB3-201ENST00000248948 QRICH2Q9H0J4 1663 aa18.46■□□□□ 0.55
VPREB3-201ENST00000248948 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
VPREB3-201ENST00000248948 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
VPREB3-201ENST00000248948 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
VPREB3-201ENST00000248948 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
VPREB3-201ENST00000248948 COL22A1Q8NFW1 1626 aaPredicted RBP18.44■□□□□ 0.54
VPREB3-201ENST00000248948 EIF3AQ14152 1382 aaKnown RBP18.43■□□□□ 0.54
VPREB3-201ENST00000248948 L3MBTL2Q969R5 705 aa18.43■□□□□ 0.54
VPREB3-201ENST00000248948 TOPAZ1Q8N9V7 1692 aa18.43■□□□□ 0.54
VPREB3-201ENST00000248948 PXDNQ92626 1479 aa18.41■□□□□ 0.54
VPREB3-201ENST00000248948 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
VPREB3-201ENST00000248948 POGKQ9P215 609 aa18.4■□□□□ 0.54
VPREB3-201ENST00000248948 SPATA31A6Q5VVP1 1343 aa18.4■□□□□ 0.54
VPREB3-201ENST00000248948 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
VPREB3-201ENST00000248948 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
VPREB3-201ENST00000248948 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.53
VPREB3-201ENST00000248948 LRP6O75581 1613 aa18.38■□□□□ 0.53
VPREB3-201ENST00000248948 ORAI2Q96SN7 254 aa18.37■□□□□ 0.53
VPREB3-201ENST00000248948 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
VPREB3-201ENST00000248948 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
VPREB3-201ENST00000248948 ATP7BP35670 1465 aa18.36■□□□□ 0.53
VPREB3-201ENST00000248948 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
VPREB3-201ENST00000248948 PNPLA6Q8IY17 1366 aa18.36■□□□□ 0.53
VPREB3-201ENST00000248948 MARF1Q9Y4F3 1742 aaKnown RBP18.36■□□□□ 0.53
VPREB3-201ENST00000248948 SAFB2Q14151 953 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPREB3-201ENST00000248948 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
VPREB3-201ENST00000248948 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
VPREB3-201ENST00000248948 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
VPREB3-201ENST00000248948 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
VPREB3-201ENST00000248948 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
VPREB3-201ENST00000248948 ABCA3Q99758 1704 aa18.34■□□□□ 0.53
VPREB3-201ENST00000248948 MINK1Q8N4C8 1332 aaPredicted RBP18.33■□□□□ 0.53
VPREB3-201ENST00000248948 NBPF1Q3BBV0 1214 aa18.33■□□□□ 0.52
VPREB3-201ENST00000248948 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
VPREB3-201ENST00000248948 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
VPREB3-201ENST00000248948 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
VPREB3-201ENST00000248948 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
VPREB3-201ENST00000248948 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
VPREB3-201ENST00000248948 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
VPREB3-201ENST00000248948 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
VPREB3-201ENST00000248948 HIRIP3Q9BW71 556 aaPredicted RBP18.29■□□□□ 0.52
VPREB3-201ENST00000248948 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
VPREB3-201ENST00000248948 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
VPREB3-201ENST00000248948 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
VPREB3-201ENST00000248948 FOXO3O43524 673 aa18.27■□□□□ 0.52
VPREB3-201ENST00000248948 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
VPREB3-201ENST00000248948 NBPF8Q3BBV2 869 aa18.26■□□□□ 0.51
VPREB3-201ENST00000248948 SBNO2Q9Y2G9 1366 aa18.26■□□□□ 0.51
VPREB3-201ENST00000248948 SBNO1A3KN83 1393 aa18.25■□□□□ 0.51
VPREB3-201ENST00000248948 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.23■□□□□ 0.51
VPREB3-201ENST00000248948 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
VPREB3-201ENST00000248948 ARHGEF10O15013 1369 aa18.22■□□□□ 0.51
VPREB3-201ENST00000248948 MEX3CQ5U5Q3 659 aaKnown RBP18.22■□□□□ 0.51
VPREB3-201ENST00000248948 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
VPREB3-201ENST00000248948 ILDR2Q71H61 639 aa18.21■□□□□ 0.51
VPREB3-201ENST00000248948 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
VPREB3-201ENST00000248948 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
VPREB3-201ENST00000248948 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
VPREB3-201ENST00000248948 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
VPREB3-201ENST00000248948 PSME1Q06323 249 aa18.2■□□□□ 0.5
VPREB3-201ENST00000248948 CDK19Q9BWU1 502 aa18.2■□□□□ 0.5
VPREB3-201ENST00000248948 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
VPREB3-201ENST00000248948 PLCH1Q4KWH8 1693 aa18.19■□□□□ 0.5
VPREB3-201ENST00000248948 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
VPREB3-201ENST00000248948 NUDT16Q96DE0 195 aaKnown RBP18.19■□□□□ 0.5
VPREB3-201ENST00000248948 NWD2Q9ULI1 1742 aa18.18■□□□□ 0.5
VPREB3-201ENST00000248948 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
VPREB3-201ENST00000248948 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
VPREB3-201ENST00000248948 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
VPREB3-201ENST00000248948 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
VPREB3-201ENST00000248948 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
VPREB3-201ENST00000248948 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
VPREB3-201ENST00000248948 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
VPREB3-201ENST00000248948 CCDC61Q9Y6R9 512 aa18.17■□□□□ 0.5
VPREB3-201ENST00000248948 MON2Q7Z3U7 1717 aa18.17■□□□□ 0.5
VPREB3-201ENST00000248948 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
VPREB3-201ENST00000248948 ZNF772Q68DY9 489 aaPredicted RBP18.16■□□□□ 0.5
VPREB3-201ENST00000248948 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
VPREB3-201ENST00000248948 NGDNQ8NEJ9 315 aaKnown RBP18.14■□□□□ 0.49
VPREB3-201ENST00000248948 ATAD2Q6PL18 1390 aa18.14■□□□□ 0.49
VPREB3-201ENST00000248948 PLEKHG3A1L390 1219 aa18.13■□□□□ 0.49
VPREB3-201ENST00000248948 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
VPREB3-201ENST00000248948 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
VPREB3-201ENST00000248948 AFF2P51816 1311 aa18.12■□□□□ 0.49
VPREB3-201ENST00000248948 CDK12Q9NYV4 1490 aaPredicted RBP18.12■□□□□ 0.49
VPREB3-201ENST00000248948 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
VPREB3-201ENST00000248948 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms