RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
NCLN-201ENST00000246117 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
NCLN-201ENST00000246117 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
NCLN-201ENST00000246117 CALD1Q05682 793 aaKnown RBP17.06■□□□□ 0.32
NCLN-201ENST00000246117 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
NCLN-201ENST00000246117 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
NCLN-201ENST00000246117 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
NCLN-201ENST00000246117 SEC24BO95487 1268 aa17.05■□□□□ 0.32
NCLN-201ENST00000246117 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
NCLN-201ENST00000246117 RLBP1P12271 317 aa17.04■□□□□ 0.32
NCLN-201ENST00000246117 WDR62O43379 1518 aa17.04■□□□□ 0.32
NCLN-201ENST00000246117 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
NCLN-201ENST00000246117 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
NCLN-201ENST00000246117 PRAG1Q86YV5 1406 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 FGD1P98174 961 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 NGEFQ8N5V2 710 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
NCLN-201ENST00000246117 IDI1Q13907 227 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 ATF7IPQ6VMQ6 1270 aa17.03■□□□□ 0.32
NCLN-201ENST00000246117 DISP1Q96F81 1524 aa17.02■□□□□ 0.31
NCLN-201ENST00000246117 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.31
NCLN-201ENST00000246117 SULT6B1Q6IMI4 303 aa17.01■□□□□ 0.31
NCLN-201ENST00000246117 CHMP5Q9NZZ3 219 aa17.01■□□□□ 0.31
NCLN-201ENST00000246117 RALGAPBQ86X10 1494 aa17.01■□□□□ 0.31
NCLN-201ENST00000246117 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
NCLN-201ENST00000246117 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
NCLN-201ENST00000246117 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
NCLN-201ENST00000246117 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
NCLN-201ENST00000246117 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
NCLN-201ENST00000246117 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
NCLN-201ENST00000246117 KIF14Q15058 1648 aa17■□□□□ 0.31
NCLN-201ENST00000246117 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
NCLN-201ENST00000246117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
NCLN-201ENST00000246117 MSNP26038 577 aaKnown RBP16.99■□□□□ 0.31
NCLN-201ENST00000246117 SYCP2Q9BX26 1530 aa16.99■□□□□ 0.31
NCLN-201ENST00000246117 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
NCLN-201ENST00000246117 TRIM27P14373 513 aa16.98■□□□□ 0.31
NCLN-201ENST00000246117 MPNDQ8N594 471 aa16.98■□□□□ 0.31
NCLN-201ENST00000246117 NOS1P29475 1434 aa16.98■□□□□ 0.31
NCLN-201ENST00000246117 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
NCLN-201ENST00000246117 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
NCLN-201ENST00000246117 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
NCLN-201ENST00000246117 TRAK2O60296 914 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 NME9Q86XW9 330 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 ANO2Q9NQ90 1003 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
NCLN-201ENST00000246117 GNAI1P63096 354 aa16.96■□□□□ 0.31
NCLN-201ENST00000246117 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
NCLN-201ENST00000246117 HMMRO75330 724 aa16.96■□□□□ 0.31
NCLN-201ENST00000246117 MCCP23508 829 aa16.96■□□□□ 0.31
NCLN-201ENST00000246117 GLIPR1L2Q4G1C9 344 aa16.96■□□□□ 0.31
NCLN-201ENST00000246117 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
NCLN-201ENST00000246117 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.3
NCLN-201ENST00000246117 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
NCLN-201ENST00000246117 WDR63Q8IWG1 891 aa16.95■□□□□ 0.3
NCLN-201ENST00000246117 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
NCLN-201ENST00000246117 MCM10Q7L590 875 aa16.95■□□□□ 0.3
NCLN-201ENST00000246117 FAM135AQ9P2D6 1515 aa16.95■□□□□ 0.3
NCLN-201ENST00000246117 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
NCLN-201ENST00000246117 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
NCLN-201ENST00000246117 KIAA0556O60303 1618 aa16.94■□□□□ 0.3
NCLN-201ENST00000246117 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
NCLN-201ENST00000246117 SMARCA5O60264 1052 aaPredicted RBP16.93■□□□□ 0.3
NCLN-201ENST00000246117 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
NCLN-201ENST00000246117 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
NCLN-201ENST00000246117 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
NCLN-201ENST00000246117 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
NCLN-201ENST00000246117 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
NCLN-201ENST00000246117 ST18O60284 1047 aa16.92■□□□□ 0.3
NCLN-201ENST00000246117 NLRP6P59044 892 aa16.92■□□□□ 0.3
NCLN-201ENST00000246117 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
NCLN-201ENST00000246117 EID1Q9Y6B2 187 aa16.92■□□□□ 0.3
NCLN-201ENST00000246117 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
NCLN-201ENST00000246117 DENND4BO75064 1496 aaPredicted RBP16.91■□□□□ 0.3
NCLN-201ENST00000246117 GOLGA6L4A6NEF3 574 aa16.91■□□□□ 0.3
NCLN-201ENST00000246117 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
NCLN-201ENST00000246117 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
NCLN-201ENST00000246117 CHD1LQ86WJ1 897 aa16.91■□□□□ 0.3
NCLN-201ENST00000246117 SCAF11Q99590 1463 aaKnown RBP16.9■□□□□ 0.3
NCLN-201ENST00000246117 A2MP01023 1474 aa16.9■□□□□ 0.3
NCLN-201ENST00000246117 SAMD9Q5K651 1589 aa16.89■□□□□ 0.29
NCLN-201ENST00000246117 F6X3S4 739 aa16.89■□□□□ 0.29
NCLN-201ENST00000246117 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
NCLN-201ENST00000246117 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
NCLN-201ENST00000246117 AIMP1Q12904 312 aaKnown RBP16.88■□□□□ 0.29
NCLN-201ENST00000246117 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
NCLN-201ENST00000246117 KRT24Q2M2I5 525 aa16.88■□□□□ 0.29
NCLN-201ENST00000246117 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
NCLN-201ENST00000246117 EXOC6BQ9Y2D4 811 aa16.87■□□□□ 0.29
NCLN-201ENST00000246117 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
NCLN-201ENST00000246117 MCM4P33991 863 aa16.87■□□□□ 0.29
NCLN-201ENST00000246117 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
NCLN-201ENST00000246117 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
NCLN-201ENST00000246117 NEK4P51957 841 aa16.86■□□□□ 0.29
NCLN-201ENST00000246117 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
NCLN-201ENST00000246117 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms